FFCP PHASE1:Mm9::chr5:114453822..114453840,+: Difference between revisions
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{{FFCP|EntrezGene=13142|HGNC=|MCL_coexpression_id=990|UniProt=P18894,Q91WH3|association_with_transcript=0bp_to_NM_010018,uc008yza.1,uc012ebr.1_5end|description=CAGE_peak_2_at_Dao_5end|id=chr5:114453822..114453840,+|ontology_enrichment_celltype=CL:0002563!9.66e-08!9;CL:0002251!9.66e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.50e-09,9;CL:0002251,2.50e-09,9;CL:0000239,6.44e-09,6;CL:0000677,6.44e-09,6;CL:0000584,6.44e-09,6;CL:0000075,1.66e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.44e-15!43;UBERON:0000344!3.31e-12!15;UBERON:0005409!1.44e-11!59;UBERON:0001242!1.29e-10!13;UBERON:0000060!1.29e-10!13;UBERON:0001262!1.29e-10!13;UBERON:0004786!1.29e-10!13;UBERON:0002113!1.82e-10!14;UBERON:0003918!1.82e-10!14;UBERON:0005095!1.82e-10!14;UBERON:0007687!1.82e-10!14;UBERON:0006554!1.35e-08!16;UBERON:0001008!7.81e-08!17;UBERON:0003350!9.66e-08!9;UBERON:0004808!9.66e-08!9;UBERON:0001277!9.66e-08!9;UBERON:0000489!1.44e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.18e-29,31;UBERON:0005409,1.33e-19,47;UBERON:0000344,4.35e-16,15;UBERON:0001242,1.11e-13,13;UBERON:0001262,1.11e-13,13;UBERON:0004786,1.11e-13,13;UBERON:0002113,1.81e-13,14;UBERON:0003918,1.81e-13,14;UBERON:0011143,1.81e-13,14;UBERON:0005095,1.81e-13,14;UBERON:0007687,1.81e-13,14;UBERON:0006554,8.75e-10,18;UBERON:0000489,1.77e-09,21;UBERON:0003350,2.50e-09,9;UBERON:0004808,2.50e-09,9;UBERON:0001277,2.50e-09,9;UBERON:0001008,4.13e-09,19;UBERON:0004923,1.06e-08,24;UBERON:0000485,2.41e-07,11|phase1_expression=0,9.07336059862339,6.3699893514535,12.7034968748869,9.5170188689806,2.85394762250213,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8855411393369,0,0,7.35965144849671,4.81759490241057,5.7423196411502,10.3382879078178,8.83432054012145,3.23039813075836,3.02436155711917,1.33038306393183,0,0,0,1.73310971850765,1.99481574430191,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,2.51264699101243,0.56276261003168,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,4.21333260395256,0,0,0,0,0,0,0,0,0,0,9.59144589640104,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,16.6885054296582,12.9856958224342,3.83185582812887,0,0,0,0.299581278809645,0.457500602818626,0,0,0,1.0389402227978,0.162241263067758,1.52759045775474,0.995255764880744,3.28539585963777,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8775888853195,4.49565963328025,0,0.464473343720877,2.57734922644187,11.8993279527772,12.2307924114679,13.1255682017666,8.0669940462567,12.0230236948528,6.28338022000674,8.75408476981064,6.82374304916921,12.5834717211591,5.61958929674205,6.17337947088538,1.89667900953082,1.02823661348756,4.50830942692322,4.48032921259691,7.37019451236978,10.9411879028897,17.5797573205435,30.8505209277369,38.6216870489782,34.6746030620259,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26147300952389,5.15731421005694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.651547837414304,0,0,0,0.302323556964751,0,0,0,3.35956781118687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7847909553045,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,1.94409613479242,1.04544148007234,0.87345025498471,0,0.247960367176008,0,0,0,0,0,0,0,0.258319646955462,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.824140228955577,0.962757628775446,1.26348605881899,1.77435509923168,1.32038438970253,0.936415074698824,0.832326981263301,0.574354689556133,0.476293691283074,0.579421629724277,0.77163688185482,0.412085900803307,0.883193520806384,0.685738504770831,0.354951612318675,1.90748951957857,0.872078499793971,0.752875043322645,0.507687647350059,0.365855945745545,0.263069711437843,0.543216455383447,1.68342681497322,1.06771516311757,0.591026894253381,0.409231043169689,0.77468420592983,0.578719832943424,0,0.467863216890817,1.71896843238639,0,0,0|short_description=p2@Dao}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13142 | |||
|HGNC= | |||
|MCL_coexpression_id=990 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P18894,uniprot:Q91WH3 | |||
|association_with_transcript=0bp_to_NM_010018,uc008yza.1,uc012ebr.1_5end | |||
|cluster_id=chr5:114453822..114453840,+ | |||
|description=CAGE_peak_2_at_Dao_5end | |||
|id=chr5:114453822..114453840,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.66e-08!9;CL:0002251!9.66e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.50e-09,9;CL:0002251,2.50e-09,9;CL:0000239,6.44e-09,6;CL:0000677,6.44e-09,6;CL:0000584,6.44e-09,6;CL:0000075,1.66e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.44e-15!43;UBERON:0000344!3.31e-12!15;UBERON:0005409!1.44e-11!59;UBERON:0001242!1.29e-10!13;UBERON:0000060!1.29e-10!13;UBERON:0001262!1.29e-10!13;UBERON:0004786!1.29e-10!13;UBERON:0002113!1.82e-10!14;UBERON:0003918!1.82e-10!14;UBERON:0005095!1.82e-10!14;UBERON:0007687!1.82e-10!14;UBERON:0006554!1.35e-08!16;UBERON:0001008!7.81e-08!17;UBERON:0003350!9.66e-08!9;UBERON:0004808!9.66e-08!9;UBERON:0001277!9.66e-08!9;UBERON:0000489!1.44e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.18e-29,31;UBERON:0005409,1.33e-19,47;UBERON:0000344,4.35e-16,15;UBERON:0001242,1.11e-13,13;UBERON:0001262,1.11e-13,13;UBERON:0004786,1.11e-13,13;UBERON:0002113,1.81e-13,14;UBERON:0003918,1.81e-13,14;UBERON:0011143,1.81e-13,14;UBERON:0005095,1.81e-13,14;UBERON:0007687,1.81e-13,14;UBERON:0006554,8.75e-10,18;UBERON:0000489,1.77e-09,21;UBERON:0003350,2.50e-09,9;UBERON:0004808,2.50e-09,9;UBERON:0001277,2.50e-09,9;UBERON:0001008,4.13e-09,19;UBERON:0004923,1.06e-08,24;UBERON:0000485,2.41e-07,11 | |||
|phase1_expression=0,9.07336059862339,6.3699893514535,12.7034968748869,9.5170188689806,2.85394762250213,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8855411393369,0,0,7.35965144849671,4.81759490241057,5.7423196411502,10.3382879078178,8.83432054012145,3.23039813075836,3.02436155711917,1.33038306393183,0,0,0,1.73310971850765,1.99481574430191,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,2.51264699101243,0.56276261003168,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,4.21333260395256,0,0,0,0,0,0,0,0,0,0,9.59144589640104,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,16.6885054296582,12.9856958224342,3.83185582812887,0,0,0,0.299581278809645,0.457500602818626,0,0,0,1.0389402227978,0.162241263067758,1.52759045775474,0.995255764880744,3.28539585963777,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8775888853195,4.49565963328025,0,0.464473343720877,2.57734922644187,11.8993279527772,12.2307924114679,13.1255682017666,8.0669940462567,12.0230236948528,6.28338022000674,8.75408476981064,6.82374304916921,12.5834717211591,5.61958929674205,6.17337947088538,1.89667900953082,1.02823661348756,4.50830942692322,4.48032921259691,7.37019451236978,10.9411879028897,17.5797573205435,30.8505209277369,38.6216870489782,34.6746030620259,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26147300952389,5.15731421005694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.651547837414304,0,0,0,0.302323556964751,0,0,0,3.35956781118687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7847909553045,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,1.94409613479242,1.04544148007234,0.87345025498471,0,0.247960367176008,0,0,0,0,0,0,0,0.258319646955462,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.824140228955577,0.962757628775446,1.26348605881899,1.77435509923168,1.32038438970253,0.936415074698824,0.832326981263301,0.574354689556133,0.476293691283074,0.579421629724277,0.77163688185482,0.412085900803307,0.883193520806384,0.685738504770831,0.354951612318675,1.90748951957857,0.872078499793971,0.752875043322645,0.507687647350059,0.365855945745545,0.263069711437843,0.543216455383447,1.68342681497322,1.06771516311757,0.591026894253381,0.409231043169689,0.77468420592983,0.578719832943424,0,0.467863216890817,1.71896843238639,0,0,0 | |||
|short_description=p2@Dao | |||
}} |
Revision as of 01:50, 6 August 2015
Short description: | p2@Dao |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dao_5end |
Coexpression cluster: | MCL_coexpression_mm9:990 |
Association with transcript: | 0bp_to_NM_010018, uc008yza.1, uc012ebr.1_5end |
EntrezGene: | 13142 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.50e-09 | 9 |
epithelial cell of alimentary canal | 2.50e-09 | 9 |
brush border epithelial cell | 6.44e-09 | 6 |
gut absorptive cell | 6.44e-09 | 6 |
enterocyte | 6.44e-09 | 6 |
columnar/cuboidal epithelial cell | 1.66e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.18e-29 | 31 |
gastrointestinal system | 1.33e-19 | 47 |
mucosa | 4.35e-16 | 15 |
intestinal mucosa | 1.11e-13 | 13 |
wall of intestine | 1.11e-13 | 13 |
gastrointestinal system mucosa | 1.11e-13 | 13 |
kidney | 1.81e-13 | 14 |
kidney mesenchyme | 1.81e-13 | 14 |
upper urinary tract | 1.81e-13 | 14 |
kidney rudiment | 1.81e-13 | 14 |
kidney field | 1.81e-13 | 14 |
urinary system structure | 8.75e-10 | 18 |
cavitated compound organ | 1.77e-09 | 21 |
epithelium of mucosa | 2.50e-09 | 9 |
gastrointestinal system epithelium | 2.50e-09 | 9 |
intestinal epithelium | 2.50e-09 | 9 |
renal system | 4.13e-09 | 19 |
organ component layer | 1.06e-08 | 24 |
simple columnar epithelium | 2.41e-07 | 11 |