FFCP PHASE1:Mm9::chr16:17646685..17646713,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=204|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:17646685..17646713,+|id=chr16:17646685..17646713,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,3.43e-09,8;CL:0000128,3.88e-07,6;CL:0000126,3.88e-07,6;CL:0000127,3.88e-07,6;CL:0000333,8.53e-07,10;CL:0000095,8.53e-07,10;CL:0000243,8.53e-07,10;CL:0000123,8.53e-07,10;CL:0000125,8.53e-07,10;CL:0000030,8.53e-07,10;CL:0000339,8.53e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!7.00e-10!102;UBERON:0000924!7.00e-10!102;UBERON:0006601!7.00e-10!102;UBERON:0001017!1.46e-07!73;UBERON:0005743!1.46e-07!73;UBERON:0000073!1.59e-07!75;UBERON:0001016!1.59e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.56e-08,95;UBERON:0000924,2.56e-08,95;UBERON:0006601,2.56e-08,95;UBERON:0003076,7.16e-07,12;UBERON:0003057,7.16e-07,12;UBERON:0010371,9.58e-07,73|phase1_expression=1.12104192973356,0,0,0,0,0.33575854382378,0.233612640595526,0.258246646883153,0,0,0,0,0,0,1.99865857089398,1.21485160433896,7.69518065940961,0,0,0,0.340173160604279,0,0,0.319984845586813,0,0,0,0,0.380046838912748,0,0.443461021310609,0.635030673459631,3.07532393792285,0,0,0,0.204169356262369,0,0,0,0,0.683045484958446,0,1.6366586336825,2.23029248682932,2.56965453026354,3.9119567217402,4.36050312760893,7.90870257844099,5.8328969722285,5.31948402176378,2.87505128729943,0,0,0,0.771778308107841,1.14613375975503,1.54701627683233,0.809265843438391,0,1.26766280701236,4.74382344896785,2.66788438833342,2.2497492932035,1.97773272513395,0.7104801149461,7.49000276296012,20.3635701820424,0.103689612308478,0.135005938331691,0,2.28520787523043,3.3130281142742,0.122490799214954,0.0958454710182364,0.919218786610021,1.10115880999389,2.29837208553338,1.38245879930619,0.395658863190582,0.182975287204819,0,2.79182999001381,5.06486349028512,2.59757021220577,3.24091444021034,0.996601765593721,0.186399445825301,0.454357159999104,0.68014404096107,0,0,0,0,0,0,0.561777680527007,4.94247935476367,5.45550609666024,5.65343319216544,1.40843419776681,1.28326477414318,2.54805239706646,0,0,0,0.505524445014783,0.22836775943812,0,0.29688427812965,0.173485326766136,0.913396434936424,0.461230994512117,0.753613202763113,0.23517741427141,0,10.3821886448437,0.578397427679647,2.65383165584962,0.808834249737046,1.32504911076236,1.45462575940567,0,1.75668478206928,2.51336048176146,0,0,0,0,2.09706895166752,1.37250180845588,0.628271760564322,1.56441888173049,1.27857728665165,2.28566849015516,1.46017136760982,1.12023300235348,1.8661045591514,3.0326731012041,0.420883711772948,1.30120442962704,0.459804208866946,1.26043490863744,0.60281927134286,0.95251098811859,1.0249097622788,0.749613796477831,1.03481348295606,0.215567992932842,0.567318240503458,0.351902248327898,0.219195732427575,0.556094498451196,0.696504333044333,2.67516777330327,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0.536546802799238,0.350296027101508,0.329119699826961,0.164167464079095,0.324275238183423,0,0,0,3.36463917702604,1.02904612379284,0,0,0.426576501070468,0.464473343720877,0.77320476793256,1.21010114774006,2.44615848229357,1.71203063501303,0,1.31759163779209,2.5133520880027,2.78539060857611,1.36474860983384,0,0.216138049874694,0,0,0.342745537829186,0,0.407302655690628,0.193952487167626,0.631222379012867,0.505892296994058,0,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0,1.21716072833102,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,0.549122826376163,0,0.744281895337007,0,0,0,0,1.66277871149944,0.189491411770485,0,0.169745085775188,0.938760993154008,0.670025029767263,1.19021820443007,1.56106918286239,0.945810864637146,0.221464689648775,1.2756381492599,1.47476983244164,0.172684981865896,1.15719246865209,0,0,6.88469982226651,3.31124095565679,3.37156238974363,1.17211686592203,1.14754461763673,0.504941854408746,0.631016438832513,0.390438744296638,0.215423397732799,0.716906393857656,0.668396022247182,0,0.404810701674894,0.292255857911312,0.395287777946524,2.57057053137446,1.13552068166615,2.13678724400706,1.14020871547503,0.659880491890142,0,1.21390318077491,0.302323556964751,0.754420319023592,0,0,1.03371317267288,1.45413491791002,1.42598951353889,0,0,1.03135543248187,0.340439605753788,0.540183282093931,0.646793418913773,1.07168517515796,0.886701168211368,0.713475270408282,0.493647061806363,1.8267896946876,0,0,0.220528398054962,0.98931751764888,1.77610869365496,1.32688434841943,1.19372344003136,1.47726809770555,0,3.52308073819968,1.87957968877638,0,0.740778109478847,1.31857919903284,3.2806614653046,1.37266903923914,0,0.139951452323658,0,0,0.949007980743406,0,0.324016022465404,1.25452977608681,1.74690050996942,2.02296519577231,1.40510874733071,0.26175594198403,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0.777804753376191,0.516639293910924,0.506868376472335,0.821500670520278,0.651021924219751,0.31457803327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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=204 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:17646685..17646713,+ | |||
|description=CAGE_peak_at_chr16:17646685..17646713,+ | |||
|id=chr16:17646685..17646713,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.43e-09,8;CL:0000128,3.88e-07,6;CL:0000126,3.88e-07,6;CL:0000127,3.88e-07,6;CL:0000333,8.53e-07,10;CL:0000095,8.53e-07,10;CL:0000243,8.53e-07,10;CL:0000123,8.53e-07,10;CL:0000125,8.53e-07,10;CL:0000030,8.53e-07,10;CL:0000339,8.53e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.00e-10!102;UBERON:0000924!7.00e-10!102;UBERON:0006601!7.00e-10!102;UBERON:0001017!1.46e-07!73;UBERON:0005743!1.46e-07!73;UBERON:0000073!1.59e-07!75;UBERON:0001016!1.59e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.56e-08,95;UBERON:0000924,2.56e-08,95;UBERON:0006601,2.56e-08,95;UBERON:0003076,7.16e-07,12;UBERON:0003057,7.16e-07,12;UBERON:0010371,9.58e-07,73 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0.33575854382378,0.233612640595526,0.258246646883153,0,0,0,0,0,0,1.99865857089398,1.21485160433896,7.69518065940961,0,0,0,0.340173160604279,0,0,0.319984845586813,0,0,0,0,0.380046838912748,0,0.443461021310609,0.635030673459631,3.07532393792285,0,0,0,0.204169356262369,0,0,0,0,0.683045484958446,0,1.6366586336825,2.23029248682932,2.56965453026354,3.9119567217402,4.36050312760893,7.90870257844099,5.8328969722285,5.31948402176378,2.87505128729943,0,0,0,0.771778308107841,1.14613375975503,1.54701627683233,0.809265843438391,0,1.26766280701236,4.74382344896785,2.66788438833342,2.2497492932035,1.97773272513395,0.7104801149461,7.49000276296012,20.3635701820424,0.103689612308478,0.135005938331691,0,2.28520787523043,3.3130281142742,0.122490799214954,0.0958454710182364,0.919218786610021,1.10115880999389,2.29837208553338,1.38245879930619,0.395658863190582,0.182975287204819,0,2.79182999001381,5.06486349028512,2.59757021220577,3.24091444021034,0.996601765593721,0.186399445825301,0.454357159999104,0.68014404096107,0,0,0,0,0,0,0.561777680527007,4.94247935476367,5.45550609666024,5.65343319216544,1.40843419776681,1.28326477414318,2.54805239706646,0,0,0,0.505524445014783,0.22836775943812,0,0.29688427812965,0.173485326766136,0.913396434936424,0.461230994512117,0.753613202763113,0.23517741427141,0,10.3821886448437,0.578397427679647,2.65383165584962,0.808834249737046,1.32504911076236,1.45462575940567,0,1.75668478206928,2.51336048176146,0,0,0,0,2.09706895166752,1.37250180845588,0.628271760564322,1.56441888173049,1.27857728665165,2.28566849015516,1.46017136760982,1.12023300235348,1.8661045591514,3.0326731012041,0.420883711772948,1.30120442962704,0.459804208866946,1.26043490863744,0.60281927134286,0.95251098811859,1.0249097622788,0.749613796477831,1.03481348295606,0.215567992932842,0.567318240503458,0.351902248327898,0.219195732427575,0.556094498451196,0.696504333044333,2.67516777330327,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0.536546802799238,0.350296027101508,0.329119699826961,0.164167464079095,0.324275238183423,0,0,0,3.36463917702604,1.02904612379284,0,0,0.426576501070468,0.464473343720877,0.77320476793256,1.21010114774006,2.44615848229357,1.71203063501303,0,1.31759163779209,2.5133520880027,2.78539060857611,1.36474860983384,0,0.216138049874694,0,0,0.342745537829186,0,0.407302655690628,0.193952487167626,0.631222379012867,0.505892296994058,0,0.156998727841375,0,0,0.166845105716094,0.589676985339609,0,1.21716072833102,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,0.549122826376163,0,0.744281895337007,0,0,0,0,1.66277871149944,0.189491411770485,0,0.169745085775188,0.938760993154008,0.670025029767263,1.19021820443007,1.56106918286239,0.945810864637146,0.221464689648775,1.2756381492599,1.47476983244164,0.172684981865896,1.15719246865209,0,0,6.88469982226651,3.31124095565679,3.37156238974363,1.17211686592203,1.14754461763673,0.504941854408746,0.631016438832513,0.390438744296638,0.215423397732799,0.716906393857656,0.668396022247182,0,0.404810701674894,0.292255857911312,0.395287777946524,2.57057053137446,1.13552068166615,2.13678724400706,1.14020871547503,0.659880491890142,0,1.21390318077491,0.302323556964751,0.754420319023592,0,0,1.03371317267288,1.45413491791002,1.42598951353889,0,0,1.03135543248187,0.340439605753788,0.540183282093931,0.646793418913773,1.07168517515796,0.886701168211368,0.713475270408282,0.493647061806363,1.8267896946876,0,0,0.220528398054962,0.98931751764888,1.77610869365496,1.32688434841943,1.19372344003136,1.47726809770555,0,3.52308073819968,1.87957968877638,0,0.740778109478847,1.31857919903284,3.2806614653046,1.37266903923914,0,0.139951452323658,0,0,0.949007980743406,0,0.324016022465404,1.25452977608681,1.74690050996942,2.02296519577231,1.40510874733071,0.26175594198403,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0.777804753376191,0.516639293910924,0.506868376472335,0.821500670520278,0.651021924219751,0.314578033277133,0.241584120826006,0.864090018773596,0,0.202725215290164,0.513554785824136,0,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0,0.453460767230423,0.443971906748129,0.538283139656854,0.839423081820392,0.386379188064381,0.187682475451182,0,0,0.501572104035363,0.564751842617067,0.460325236507177,2.29158205375759,0.859265911718438,0,0.755393897389701,0,1.35096360967266,0,0.51776031175182,0.31136204275253,0,0.341467211508268,0.486213434136588,0.419226325255965,0.551530525350042,0.888986911206461,1.03017528619447,0.64183841918363,0.252697211763798,0.25347929989024,0.754505365544305,0.37456602987953,0.768301828858431,1.09127391015665,2.38146845641537,1.15884325944855,0.77163688185482,0.824171801606613,0.441596760403192,1.02860775715625,0.887379030796687,0.715308569841963,0.436039249896986,0.846984423737976,0.507687647350059,1.64635175585495,0.526139422875686,0.814824683075171,0.561142271657738,0.593175090620871,1.0835493061312,0.409231043169689,1.54936841185966,0.192906610981141,0.499621155875892,1.16965804222704,1.28922632428979,1.91288332068843,0.441182838239031,2.08681052058379 | |||
|short_description=p@chr16:17646685..17646713,+ | |||
}} |
Latest revision as of 02:43, 6 August 2015
Short description: | p@chr16:17646685..17646713, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:17646685..17646713, + |
Coexpression cluster: | MCL_coexpression_mm9:204 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.43e-09 | 8 |
oligodendrocyte | 3.88e-07 | 6 |
macroglial cell | 3.88e-07 | 6 |
astrocyte | 3.88e-07 | 6 |
migratory neural crest cell | 8.53e-07 | 10 |
neuron associated cell | 8.53e-07 | 10 |
glial cell (sensu Vertebrata) | 8.53e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 8.53e-07 | 10 |
glial cell | 8.53e-07 | 10 |
glioblast | 8.53e-07 | 10 |
glioblast (sensu Vertebrata) | 8.53e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.56e-08 | 95 |
ectoderm | 2.56e-08 | 95 |
presumptive ectoderm | 2.56e-08 | 95 |
posterior neural tube | 7.16e-07 | 12 |
chordal neural plate | 7.16e-07 | 12 |
ecto-epithelium | 9.58e-07 | 73 |