FFCP PHASE1:Mm9::chr1:88008484..88008502,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=15559|HGNC=|MCL_coexpression_id=579|UniProt=Q02152|association_with_transcript=42bp_to_ENSMUST00000027431,NM_008311,uc007buz.1_5end|description=CAGE_peak_1_at_Htr2b_5end|id=chr1:88008484..88008502,-|ontology_enrichment_celltype=CL:0000107!2.49e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,4.37e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!4.63e-08!11;UBERON:0002410!2.49e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0010313,1.90e-17,3;UBERON:0002342,1.90e-17,3;UBERON:0002005,1.90e-17,3;UBERON:0005428,1.90e-17,3;UBERON:0005062,1.90e-17,3;UBERON:0005795,1.14e-12,4;UBERON:0000995,1.14e-12,4;UBERON:0001987,1.16e-11,2;UBERON:0003124,1.16e-11,2;UBERON:0004340,1.16e-11,2;UBERON:0003975,3.05e-10,5;UBERON:0002410,4.37e-10,9;UBERON:0000010,2.82e-08,11;UBERON:0005631,4.62e-08,3;UBERON:0000478,4.62e-08,3;UBERON:0000158,4.62e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0.494389935468748,0.578397427679647,0,0.323533699894818,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0.146199987425332,0.219550115291051,0,0.210289948564127,0,0,0.264450566663544,0,0.464473343720877,0.38660238396628,0.605050573870028,0.444756087689741,0.951128130562796,0,0.329397909448022,1.00534083520108,1.59165177632921,1.55971269695296,0,0.648414149624083,0.796565093017469,0.189667900953082,0.114248512609729,0,0.407302655690628,0.581857461502877,0.420814919341911,1.83385957660346,0.442830443938806,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,1.50791283939272,0.54390568381871,0,0,0,0.117211686592203,0,0.757412781613119,12.9358369960665,21.8645696806118,20.4652227846159,0.238968797952552,0.222798674082394,0,0.809621403349789,0.292255857911312,1.97643888973262,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,1.64270195644597,4.2366414172764,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0.418176592028937,0.655087691238533,1.88810084938749,2.89287095038676,1.57053565190418,1.55537967950151,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,2.064507229963,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0.695603506861264|short_description=p1@Htr2b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15559 | |||
|HGNC= | |||
|MCL_coexpression_id=579 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q02152 | |||
|association_with_transcript=42bp_to_ENSMUST00000027431,NM_008311,uc007buz.1_5end | |||
|cluster_id=chr1:88008484..88008502,- | |||
|description=CAGE_peak_1_at_Htr2b_5end | |||
|id=chr1:88008484..88008502,- | |||
|ontology_enrichment_celltype=CL:0000107!2.49e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.37e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!4.63e-08!11;UBERON:0002410!2.49e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010313,1.90e-17,3;UBERON:0002342,1.90e-17,3;UBERON:0002005,1.90e-17,3;UBERON:0005428,1.90e-17,3;UBERON:0005062,1.90e-17,3;UBERON:0005795,1.14e-12,4;UBERON:0000995,1.14e-12,4;UBERON:0001987,1.16e-11,2;UBERON:0003124,1.16e-11,2;UBERON:0004340,1.16e-11,2;UBERON:0003975,3.05e-10,5;UBERON:0002410,4.37e-10,9;UBERON:0000010,2.82e-08,11;UBERON:0005631,4.62e-08,3;UBERON:0000478,4.62e-08,3;UBERON:0000158,4.62e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0.494389935468748,0.578397427679647,0,0.323533699894818,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0.146199987425332,0.219550115291051,0,0.210289948564127,0,0,0.264450566663544,0,0.464473343720877,0.38660238396628,0.605050573870028,0.444756087689741,0.951128130562796,0,0.329397909448022,1.00534083520108,1.59165177632921,1.55971269695296,0,0.648414149624083,0.796565093017469,0.189667900953082,0.114248512609729,0,0.407302655690628,0.581857461502877,0.420814919341911,1.83385957660346,0.442830443938806,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,1.50791283939272,0.54390568381871,0,0,0,0.117211686592203,0,0.757412781613119,12.9358369960665,21.8645696806118,20.4652227846159,0.238968797952552,0.222798674082394,0,0.809621403349789,0.292255857911312,1.97643888973262,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,1.64270195644597,4.2366414172764,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0.418176592028937,0.655087691238533,1.88810084938749,2.89287095038676,1.57053565190418,1.55537967950151,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,2.064507229963,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0.695603506861264 | |||
|short_description=p1@Htr2b | |||
}} |
Revision as of 03:00, 6 August 2015
Short description: | p1@Htr2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Htr2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:579 |
Association with transcript: | 42bp_to_ENSMUST00000027431, NM_008311, uc007buz.1_5end |
EntrezGene: | 15559 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.37e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
neural crest-derived structure | 1.90e-17 | 3 |
neural crest | 1.90e-17 | 3 |
enteric nervous system | 1.90e-17 | 3 |
vagal neural crest | 1.90e-17 | 3 |
neural fold | 1.90e-17 | 3 |
embryonic uterus | 1.14e-12 | 4 |
uterus | 1.14e-12 | 4 |
placenta | 1.16e-11 | 2 |
chorion | 1.16e-11 | 2 |
allantois | 1.16e-11 | 2 |
internal female genitalia | 3.05e-10 | 5 |
autonomic nervous system | 4.37e-10 | 9 |
peripheral nervous system | 2.82e-08 | 11 |
extraembryonic membrane | 4.62e-08 | 3 |
extraembryonic structure | 4.62e-08 | 3 |
membranous layer | 4.62e-08 | 3 |