FFCP PHASE1:Mm9::chr5:118291939..118291948,+: Difference between revisions
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{{FFCP|EntrezGene=18125|HGNC=|MCL_coexpression_id=114|UniProt=Q9Z0J4|association_with_transcript=-204bp_to_ENSMUST00000142742_5end|description=CAGE_peak_5_at_Nos1_5end|id=chr5:118291939..118291948,+|ontology_enrichment_celltype=CL:0000540!5.21e-20!33;CL:0000047!5.21e-20!33;CL:0000031!5.21e-20!33;CL:0000404!5.21e-20!33;CL:0000393!9.10e-16!39;CL:0000211!9.10e-16!39;CL:0000107!1.39e-14!9;CL:0002319!1.29e-13!43;CL:0000221!3.85e-13!44;CL:0000133!3.85e-13!44;CL:0000055!1.04e-10!50;CL:0000117!1.10e-09!23;CL:0000337!1.10e-09!23|ontology_enrichment_celltype_v019_2=CL:0000107,3.62e-61,9;CL:0000540,4.60e-24,33;CL:0000047,4.60e-24,33;CL:0000031,4.60e-24,33;CL:0000404,4.60e-24,33;CL:0000393,3.26e-20,39;CL:0000211,3.26e-20,39;CL:0002319,3.06e-18,43;CL:0000221,8.39e-18,44;CL:0000133,8.39e-18,44;CL:0002321,8.70e-11,70;CL:0000723,5.05e-08,91;CL:0000048,5.05e-08,91;CL:0000034,1.89e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.61e-28!73;UBERON:0005743!2.61e-28!73;UBERON:0000073!3.36e-27!75;UBERON:0001016!3.36e-27!75;UBERON:0004121!1.81e-17!102;UBERON:0000924!1.81e-17!102;UBERON:0006601!1.81e-17!102;UBERON:0001049!6.92e-15!52;UBERON:0005068!6.92e-15!52;UBERON:0006241!6.92e-15!52;UBERON:0007135!6.92e-15!52;UBERON:0000955!1.14e-14!50;UBERON:0006238!1.14e-14!50;UBERON:0002410!1.39e-14!9;UBERON:0002616!1.01e-13!49;UBERON:0002346!7.35e-13!71;UBERON:0003075!7.35e-13!71;UBERON:0007284!7.35e-13!71;UBERON:0002020!9.45e-13!34;UBERON:0000010!1.88e-11!11;UBERON:0000033!5.42e-10!63;UBERON:0003080!5.49e-10!40;UBERON:0002791!8.92e-10!29;UBERON:0003528!8.92e-10!29;UBERON:0001893!8.92e-10!29;UBERON:0002780!3.69e-09!39;UBERON:0001890!3.69e-09!39;UBERON:0006240!3.69e-09!39;UBERON:0003056!4.03e-07!49;UBERON:0000956!4.25e-07!21;UBERON:0001869!4.25e-07!21;UBERON:0000203!4.25e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.62e-61,9;UBERON:0000010,6.01e-50,11;UBERON:0010313,1.30e-21,3;UBERON:0002342,1.30e-21,3;UBERON:0002005,1.30e-21,3;UBERON:0005428,1.30e-21,3;UBERON:0005062,1.30e-21,3;UBERON:0000013,1.52e-21,3;UBERON:0000011,5.34e-21,3;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0.856952953211411,0.441737081903227,0,0,1.83843757322004,1.10115880999389,0.255374676170375,0.46081959976873,0,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.599162557619291,0.915001205637253,0.753926112677186,0.173824320192276,0,0.83115217823824,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.617427674275707,0,0,0,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0.432276099749388,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,2.2085575359138,4.29482618726302,7.75524231838076,2.62865677747807,1.78238939265915,3.11384183867716,2.42886421004937,3.50707029493574,6.32460444714438,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.627264888043406,0.218362563746178,0.539457385539283,0.247960367176008,0,0.259229946583586,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0,1.35004500046361,0,0.453142408984205,1.55328093525546,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p5@Nos1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18125 | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z0J4 | |||
|association_with_transcript=-204bp_to_ENSMUST00000142742_5end | |||
|cluster_id=chr5:118291939..118291948,+ | |||
|description=CAGE_peak_5_at_Nos1_5end | |||
|id=chr5:118291939..118291948,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.21e-20!33;CL:0000047!5.21e-20!33;CL:0000031!5.21e-20!33;CL:0000404!5.21e-20!33;CL:0000393!9.10e-16!39;CL:0000211!9.10e-16!39;CL:0000107!1.39e-14!9;CL:0002319!1.29e-13!43;CL:0000221!3.85e-13!44;CL:0000133!3.85e-13!44;CL:0000055!1.04e-10!50;CL:0000117!1.10e-09!23;CL:0000337!1.10e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.62e-61,9;CL:0000540,4.60e-24,33;CL:0000047,4.60e-24,33;CL:0000031,4.60e-24,33;CL:0000404,4.60e-24,33;CL:0000393,3.26e-20,39;CL:0000211,3.26e-20,39;CL:0002319,3.06e-18,43;CL:0000221,8.39e-18,44;CL:0000133,8.39e-18,44;CL:0002321,8.70e-11,70;CL:0000723,5.05e-08,91;CL:0000048,5.05e-08,91;CL:0000034,1.89e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.61e-28!73;UBERON:0005743!2.61e-28!73;UBERON:0000073!3.36e-27!75;UBERON:0001016!3.36e-27!75;UBERON:0004121!1.81e-17!102;UBERON:0000924!1.81e-17!102;UBERON:0006601!1.81e-17!102;UBERON:0001049!6.92e-15!52;UBERON:0005068!6.92e-15!52;UBERON:0006241!6.92e-15!52;UBERON:0007135!6.92e-15!52;UBERON:0000955!1.14e-14!50;UBERON:0006238!1.14e-14!50;UBERON:0002410!1.39e-14!9;UBERON:0002616!1.01e-13!49;UBERON:0002346!7.35e-13!71;UBERON:0003075!7.35e-13!71;UBERON:0007284!7.35e-13!71;UBERON:0002020!9.45e-13!34;UBERON:0000010!1.88e-11!11;UBERON:0000033!5.42e-10!63;UBERON:0003080!5.49e-10!40;UBERON:0002791!8.92e-10!29;UBERON:0003528!8.92e-10!29;UBERON:0001893!8.92e-10!29;UBERON:0002780!3.69e-09!39;UBERON:0001890!3.69e-09!39;UBERON:0006240!3.69e-09!39;UBERON:0003056!4.03e-07!49;UBERON:0000956!4.25e-07!21;UBERON:0001869!4.25e-07!21;UBERON:0000203!4.25e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.62e-61,9;UBERON:0000010,6.01e-50,11;UBERON:0010313,1.30e-21,3;UBERON:0002342,1.30e-21,3;UBERON:0002005,1.30e-21,3;UBERON:0005428,1.30e-21,3;UBERON:0005062,1.30e-21,3;UBERON:0000013,1.52e-21,3;UBERON:0000011,5.34e-21,3;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0.856952953211411,0.441737081903227,0,0,1.83843757322004,1.10115880999389,0.255374676170375,0.46081959976873,0,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.599162557619291,0.915001205637253,0.753926112677186,0.173824320192276,0,0.83115217823824,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.617427674275707,0,0,0,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0.432276099749388,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,2.2085575359138,4.29482618726302,7.75524231838076,2.62865677747807,1.78238939265915,3.11384183867716,2.42886421004937,3.50707029493574,6.32460444714438,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.627264888043406,0.218362563746178,0.539457385539283,0.247960367176008,0,0.259229946583586,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0,1.35004500046361,0,0.453142408984205,1.55328093525546,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p5@Nos1 | |||
}} |
Revision as of 03:48, 6 August 2015
Short description: | p5@Nos1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nos1_5end |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | -204bp_to_ENSMUST00000142742_5end |
EntrezGene: | 18125 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.62e-61 | 9 |
neuron | 4.60e-24 | 33 |
neuronal stem cell | 4.60e-24 | 33 |
neuroblast | 4.60e-24 | 33 |
electrically signaling cell | 4.60e-24 | 33 |
electrically responsive cell | 3.26e-20 | 39 |
electrically active cell | 3.26e-20 | 39 |
neural cell | 3.06e-18 | 43 |
ectodermal cell | 8.39e-18 | 44 |
neurectodermal cell | 8.39e-18 | 44 |
embryonic cell | 8.70e-11 | 70 |
somatic stem cell | 5.05e-08 | 91 |
multi fate stem cell | 5.05e-08 | 91 |
stem cell | 1.89e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 3.62e-61 | 9 |
peripheral nervous system | 6.01e-50 | 11 |
neural crest-derived structure | 1.30e-21 | 3 |
neural crest | 1.30e-21 | 3 |
enteric nervous system | 1.30e-21 | 3 |
vagal neural crest | 1.30e-21 | 3 |
neural fold | 1.30e-21 | 3 |
sympathetic nervous system | 1.52e-21 | 3 |
parasympathetic nervous system | 5.34e-21 | 3 |
central nervous system | 1.30e-14 | 73 |
nervous system | 3.42e-14 | 75 |
ectoderm-derived structure | 5.96e-11 | 95 |
ectoderm | 5.96e-11 | 95 |
presumptive ectoderm | 5.96e-11 | 95 |