FFCP PHASE1:Mm9::chr1:90083177..90083194,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=195|UniProt=|association_with_transcript=-42bp_to_ENSMUST00000120438_5end|description=CAGE_peak_1_at_ENSMUST00000120438_5end|id=chr1:90083177..90083194,+|ontology_enrichment_celltype=CL:0002563!6.74e-24!9;CL:0002251!6.74e-24!9;CL:0000239!4.98e-17!6;CL:0000677!4.98e-17!6;CL:0000212!4.98e-17!6;CL:0000584!4.98e-17!6;CL:0000075!1.66e-14!7;CL:0000066!7.44e-14!25;CL:0002076!1.03e-13!15;CL:0000223!6.74e-10!20;CL:0000473!4.47e-09!3;CL:0000627!4.47e-09!3;CL:0000682!4.47e-09!3;CL:0002250!1.89e-08!3|ontology_enrichment_celltype_v019_2=CL:0000239,7.37e-17,6;CL:0000677,7.37e-17,6;CL:0000584,7.37e-17,6;CL:0002563,1.30e-15,9;CL:0002251,1.30e-15,9;CL:0000075,1.97e-14,7;CL:0000682,3.85e-12,3;CL:0000066,1.62e-11,25;CL:0002076,3.54e-09,15;CL:0000223,9.37e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.46e-40!15;UBERON:0001242!5.32e-35!13;UBERON:0000060!5.32e-35!13;UBERON:0001262!5.32e-35!13;UBERON:0004786!5.32e-35!13;UBERON:0000160!8.99e-31!43;UBERON:0004923!5.53e-24!24;UBERON:0003350!6.74e-24!9;UBERON:0004808!6.74e-24!9;UBERON:0001277!6.74e-24!9;UBERON:0005409!1.92e-23!59;UBERON:0000485!2.86e-19!11;UBERON:0001007!4.34e-10!128;UBERON:0001555!4.34e-10!128;UBERON:0007026!4.34e-10!128;UBERON:0004119!7.53e-10!130;UBERON:0000925!7.53e-10!130;UBERON:0006595!7.53e-10!130;UBERON:0000331!1.39e-09!3;UBERON:0002116!1.39e-09!3;UBERON:0001204!1.39e-09!3;UBERON:0001168!1.39e-09!3;UBERON:0004921!2.87e-08!126;UBERON:0004185!2.87e-08!126;UBERON:0001155!4.73e-07!2;UBERON:0000059!4.73e-07!2;UBERON:0001962!9.20e-07!2;UBERON:0001961!9.20e-07!2;UBERON:0001744!9.20e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.89e-37,15;UBERON:0000160,2.54e-31,31;UBERON:0001242,9.02e-30,13;UBERON:0001262,9.02e-30,13;UBERON:0004786,9.02e-30,13;UBERON:0005409,1.19e-22,47;UBERON:0004923,2.54e-22,24;UBERON:0003350,1.30e-15,9;UBERON:0004808,1.30e-15,9;UBERON:0001277,1.30e-15,9;UBERON:0000331,7.43e-13,3;UBERON:0002116,7.43e-13,3;UBERON:0001204,7.43e-13,3;UBERON:0001168,7.43e-13,3;UBERON:0000485,1.09e-12,11;UBERON:0002108,9.11e-10,4;UBERON:0001007,9.75e-10,116;UBERON:0001555,9.75e-10,116;UBERON:0007026,9.75e-10,116;UBERON:0004119,1.62e-09,118;UBERON:0000925,1.62e-09,118;UBERON:0006595,1.62e-09,118;UBERON:0001155,2.68e-09,2;UBERON:0000059,2.68e-09,2;UBERON:0001962,6.82e-09,2;UBERON:0001961,6.82e-09,2;UBERON:0001744,6.82e-09,2;UBERON:0004921,1.38e-07,114|phase1_expression=0,1.74487703819681,2.27499619694768,10.5862473957391,12.5223932486587,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,2.2940928106717,1.72269589234506,2.58457197695445,1.07735616342945,6.27077284206034,4.28451220591882,1.33038306393183,0,0,0,0.577703239502549,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2167513193519,2.64450566663544,0,0,0,0.201683524623343,0,0,4.2707615539006,0,0,0,0.19496408711912,0.898819408654221,7.5648317456143,8.96135729644652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.7737326285348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000120438}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=195 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-42bp_to_ENSMUST00000120438_5end | |||
|cluster_id=chr1:90083177..90083194,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000120438_5end | |||
|id=chr1:90083177..90083194,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.74e-24!9;CL:0002251!6.74e-24!9;CL:0000239!4.98e-17!6;CL:0000677!4.98e-17!6;CL:0000212!4.98e-17!6;CL:0000584!4.98e-17!6;CL:0000075!1.66e-14!7;CL:0000066!7.44e-14!25;CL:0002076!1.03e-13!15;CL:0000223!6.74e-10!20;CL:0000473!4.47e-09!3;CL:0000627!4.47e-09!3;CL:0000682!4.47e-09!3;CL:0002250!1.89e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.37e-17,6;CL:0000677,7.37e-17,6;CL:0000584,7.37e-17,6;CL:0002563,1.30e-15,9;CL:0002251,1.30e-15,9;CL:0000075,1.97e-14,7;CL:0000682,3.85e-12,3;CL:0000066,1.62e-11,25;CL:0002076,3.54e-09,15;CL:0000223,9.37e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.46e-40!15;UBERON:0001242!5.32e-35!13;UBERON:0000060!5.32e-35!13;UBERON:0001262!5.32e-35!13;UBERON:0004786!5.32e-35!13;UBERON:0000160!8.99e-31!43;UBERON:0004923!5.53e-24!24;UBERON:0003350!6.74e-24!9;UBERON:0004808!6.74e-24!9;UBERON:0001277!6.74e-24!9;UBERON:0005409!1.92e-23!59;UBERON:0000485!2.86e-19!11;UBERON:0001007!4.34e-10!128;UBERON:0001555!4.34e-10!128;UBERON:0007026!4.34e-10!128;UBERON:0004119!7.53e-10!130;UBERON:0000925!7.53e-10!130;UBERON:0006595!7.53e-10!130;UBERON:0000331!1.39e-09!3;UBERON:0002116!1.39e-09!3;UBERON:0001204!1.39e-09!3;UBERON:0001168!1.39e-09!3;UBERON:0004921!2.87e-08!126;UBERON:0004185!2.87e-08!126;UBERON:0001155!4.73e-07!2;UBERON:0000059!4.73e-07!2;UBERON:0001962!9.20e-07!2;UBERON:0001961!9.20e-07!2;UBERON:0001744!9.20e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.89e-37,15;UBERON:0000160,2.54e-31,31;UBERON:0001242,9.02e-30,13;UBERON:0001262,9.02e-30,13;UBERON:0004786,9.02e-30,13;UBERON:0005409,1.19e-22,47;UBERON:0004923,2.54e-22,24;UBERON:0003350,1.30e-15,9;UBERON:0004808,1.30e-15,9;UBERON:0001277,1.30e-15,9;UBERON:0000331,7.43e-13,3;UBERON:0002116,7.43e-13,3;UBERON:0001204,7.43e-13,3;UBERON:0001168,7.43e-13,3;UBERON:0000485,1.09e-12,11;UBERON:0002108,9.11e-10,4;UBERON:0001007,9.75e-10,116;UBERON:0001555,9.75e-10,116;UBERON:0007026,9.75e-10,116;UBERON:0004119,1.62e-09,118;UBERON:0000925,1.62e-09,118;UBERON:0006595,1.62e-09,118;UBERON:0001155,2.68e-09,2;UBERON:0000059,2.68e-09,2;UBERON:0001962,6.82e-09,2;UBERON:0001961,6.82e-09,2;UBERON:0001744,6.82e-09,2;UBERON:0004921,1.38e-07,114 | |||
|phase1_expression=0,1.74487703819681,2.27499619694768,10.5862473957391,12.5223932486587,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,2.2940928106717,1.72269589234506,2.58457197695445,1.07735616342945,6.27077284206034,4.28451220591882,1.33038306393183,0,0,0,0.577703239502549,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2167513193519,2.64450566663544,0,0,0,0.201683524623343,0,0,4.2707615539006,0,0,0,0.19496408711912,0.898819408654221,7.5648317456143,8.96135729644652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.7737326285348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000120438 | |||
}} |
Latest revision as of 04:17, 6 August 2015
Short description: | p1@ENSMUST00000120438 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000120438_5end |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | -42bp_to_ENSMUST00000120438_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.37e-17 | 6 |
gut absorptive cell | 7.37e-17 | 6 |
enterocyte | 7.37e-17 | 6 |
intestinal epithelial cell | 1.30e-15 | 9 |
epithelial cell of alimentary canal | 1.30e-15 | 9 |
columnar/cuboidal epithelial cell | 1.97e-14 | 7 |
M cell of gut | 3.85e-12 | 3 |
epithelial cell | 1.62e-11 | 25 |
endo-epithelial cell | 3.54e-09 | 15 |
endodermal cell | 9.37e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.89e-37 | 15 |
intestine | 2.54e-31 | 31 |
intestinal mucosa | 9.02e-30 | 13 |
wall of intestine | 9.02e-30 | 13 |
gastrointestinal system mucosa | 9.02e-30 | 13 |
gastrointestinal system | 1.19e-22 | 47 |
organ component layer | 2.54e-22 | 24 |
epithelium of mucosa | 1.30e-15 | 9 |
gastrointestinal system epithelium | 1.30e-15 | 9 |
intestinal epithelium | 1.30e-15 | 9 |
ileal mucosa | 7.43e-13 | 3 |
ileum | 7.43e-13 | 3 |
mucosa of small intestine | 7.43e-13 | 3 |
wall of small intestine | 7.43e-13 | 3 |
simple columnar epithelium | 1.09e-12 | 11 |
small intestine | 9.11e-10 | 4 |
digestive system | 9.75e-10 | 116 |
digestive tract | 9.75e-10 | 116 |
primitive gut | 9.75e-10 | 116 |
endoderm-derived structure | 1.62e-09 | 118 |
endoderm | 1.62e-09 | 118 |
presumptive endoderm | 1.62e-09 | 118 |
colon | 2.68e-09 | 2 |
large intestine | 2.68e-09 | 2 |
gut-associated lymphoid tissue | 6.82e-09 | 2 |
mucosa-associated lymphoid tissue | 6.82e-09 | 2 |
lymphoid tissue | 6.82e-09 | 2 |
subdivision of digestive tract | 1.38e-07 | 114 |