FFCP PHASE1:Mm9::chr3:19857037..19857073,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12870|HGNC=|MCL_coexpression_id=1790|UniProt=G3X8Q5,Q61147,E9PZD8,Q8BU82,Q2F3J4|association_with_transcript=0bp_to_ENSMUST00000003714,ENSMUST00000091309,ENSMUST00000108329,ENSMUST00000128615,NM_001042611,NM_007752,uc008ory.1,uc008orz.1,uc008osa.1,uc008osb.1,uc008osc.1,uc012cnu.1_5end|description=CAGE_peak_2_at_Cp_5end|id=chr3:19857037..19857073,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!4.39e-12!47;UBERON:0009569!4.03e-11!66;UBERON:0003914!8.27e-11!47;UBERON:0002100!1.18e-10!98;UBERON:0002365!2.25e-10!25;UBERON:0002330!2.25e-10!25;UBERON:0004111!4.72e-10!122;UBERON:0005177!7.53e-10!85;UBERON:0000466!1.19e-09!79;UBERON:0002107!6.56e-09!22;UBERON:0007499!6.56e-09!22;UBERON:0006925!6.56e-09!22;UBERON:0009497!6.56e-09!22;UBERON:0000015!6.56e-09!22;UBERON:0002423!6.56e-09!22;UBERON:0006235!6.56e-09!22;UBERON:0008835!6.56e-09!22;UBERON:0003894!6.56e-09!22;UBERON:0004161!6.56e-09!22;UBERON:0008836!6.56e-09!22;UBERON:0009854!8.86e-09!23;UBERON:0009856!8.86e-09!23;UBERON:0000025!9.88e-09!114;UBERON:0000468!1.52e-08!333;UBERON:0005172!1.68e-08!49;UBERON:0005173!1.68e-08!49;UBERON:0002417!1.68e-08!49;UBERON:0000916!1.68e-08!49;UBERON:0005085!3.96e-08!13;UBERON:0001048!3.73e-07!147;UBERON:0001444!6.15e-07!11;UBERON:0000970!6.72e-07!9;UBERON:0000019!6.72e-07!9;UBERON:0000047!6.72e-07!9;UBERON:0004088!6.72e-07!9;UBERON:0002104!6.72e-07!9;UBERON:0001456!6.72e-07!9;UBERON:0003072!6.72e-07!9;UBERON:0003071!6.72e-07!9;UBERON:0004128!6.72e-07!9;UBERON:0000020!8.79e-07!12;UBERON:0001032!8.79e-07!12;UBERON:0004456!8.79e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0005256,5.05e-13,45;UBERON:0002365,2.58e-11,25;UBERON:0002330,2.58e-11,25;UBERON:0003914,5.17e-11,47;UBERON:0009569,6.86e-11,66;UBERON:0002100,2.02e-10,90;UBERON:0003104,7.55e-10,61;UBERON:0009142,7.55e-10,61;UBERON:0005177,8.54e-10,79;UBERON:0002107,1.07e-09,22;UBERON:0007499,1.07e-09,22;UBERON:0006925,1.07e-09,22;UBERON:0009497,1.07e-09,22;UBERON:0000015,1.07e-09,22;UBERON:0002423,1.07e-09,22;UBERON:0006235,1.07e-09,22;UBERON:0008835,1.07e-09,22;UBERON:0003894,1.07e-09,22;UBERON:0004161,1.07e-09,22;UBERON:0008836,1.07e-09,22;UBERON:0009854,1.49e-09,23;UBERON:0009856,1.49e-09,23;UBERON:0005085,3.28e-08,13;UBERON:0005172,3.51e-08,49;UBERON:0005173,3.51e-08,49;UBERON:0002417,3.51e-08,49;UBERON:0000916,3.51e-08,49;UBERON:0004111,8.43e-08,122;UBERON:0001048,1.61e-07,134;UBERON:0001444,1.64e-07,11;UBERON:0000970,1.81e-07,9;UBERON:0000019,1.81e-07,9;UBERON:0000047,1.81e-07,9;UBERON:0010312,1.81e-07,9;UBERON:0004088,1.81e-07,9;UBERON:0002104,1.81e-07,9;UBERON:0001456,1.81e-07,9;UBERON:0003072,1.81e-07,9;UBERON:0004128,1.81e-07,9;UBERON:0003071,1.81e-07,9;UBERON:0000033,4.84e-07,13;UBERON:0000025,6.16e-07,114;UBERON:0000020,9.11e-07,12;UBERON:0001032,9.11e-07,12;UBERON:0004456,9.11e-07,12|phase1_expression=22.9012851359855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39921408534059,3.34543873024398,1.46837401729345,6.25913075478431,0.436050312760893,0.878744730937887,1.74986909166855,0,1.43752564364972,0,0,0,51.1946277711534,43.8396163106298,42.2851115667503,0.202316460859598,0,0,0.338844532069132,0,0,0,0,1.19840044207362,0.384218305321555,0.207379224616955,0.270011876663381,0,0.856952953211411,1.10434270475807,0,0,0,0,1.27687338085188,1.53606533256243,0.131886287730194,0.365950574409639,0.52091337055676,2.23346399201105,4.50210088025344,2.13917546887534,2.35702868378934,3.55929201997757,1.1183966749518,0.151452386666368,0.226714680320357,12.1743085254705,14.6272059086836,3.39985666853875,7.55584468292944,23.3919510281161,17.9210754838934,6.03911006566533,0,0.259786004602869,0,0.985903938436763,0,0,0,1.94841936910093,1.26679932737549,2.02209778005913,7.65031994117702,8.2860122767095,23.1569736941127,0.173485326766136,2.74018930480927,7.37969591219387,15.0722640552623,17.52071736322,8.92232798440696,3.46072954828123,5.35017620603673,1.76922110389975,1.13236794963186,1.32504911076236,1.45462575940567,1.86391761218122,2.63502717310392,2.09446706813455,0,0,0,0,2.24685959107234,0.457500602818626,0,3.12883776346098,2.04572365864264,1.87009240103604,1.78465389374533,11.4060087512354,20.6515571212754,54.8408385801074,10.5220927943237,27.8457747940186,28.2779588453172,38.3532336485394,32.4015358346787,53.2725788354897,59.9572210933097,46.0075467588269,25.3529303324235,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0,0,0,0,0.207125772535502,0.469052119962192,0,0.473489471170421,0,0.617068451549513,0.465067889500816,1.07309360559848,3.73649095574942,1.97471819896177,4.43252153013557,13.2142159559745,16.2281986042119,16.9053588774109,48.8511364287753,1.26173969138476,2.26390147234426,0,0.793351699990633,0,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0.949058123089023,1.31759163779209,1.00534083520108,1.39269530428806,0.974820435595601,0.898819408654221,1.29682829924817,0.597423819763102,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.631222379012867,1.64414996523069,3.39503340353085,3.29697328466887,5.92306386824642,12.1545577105731,0.333690211432188,0,2.02375901146368,6.49152388443209,21.9471215374699,57.2908166508195,38.2635862809578,47.6677566718604,33.2219309957579,25.8782771749238,64.0082429989826,43.997311909153,19.7011524798747,11.4814344654024,19.7801843758981,13.6717360723287,0,0.325929952884052,0.339490171550376,1.17345124144251,6.365237782789,14.7587057349329,8.97614780145875,13.0837169608139,13.0664166892777,12.756381492599,18.1888279334469,16.577758259126,17.6471851469444,0,0.54390568381871,36.3905562034087,35.043966780701,3.21101179975584,3.28192722458169,0,3.02965112645248,0,1.17131623288992,4.52389135238878,0.716906393857656,1.11399337041197,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,2.89189184779626,5.53566332312248,1.42452482933804,2.60619134965722,5.77395430403874,1.32745138339963,0,0.302323556964751,0,0,1.22974059177571,2.32585463851399,3.27180356529755,2.13898427030833,2.52829406348653,2.10837217149998,2.06271086496374,3.74483566329167,5.04171063287669,0.388076051348264,0.643011105094777,0.532020700926821,0.713475270408282,0.987294123612726,1.2178597964584,0.23467170806371,2.75381692122966,6.3953235435939,3.13283880588812,3.22928853391811,0.663442174209714,1.43246812803764,0.656563598980245,0.874442509889552,2.78137953015765,2.05045056957423,0.412773735926445,0.185194527369712,1.50694765603753,0.956859594047176,1.83022538565218,0,0,0,0.954670618015114,0,0,0,0,0.87345025498471,1.88810084938749,4.79390043206948,0.26175594198403,0.90730481304255,6.83473244395618,1.12738587736838,0.149516546043979,0.330916980914195,0.388902376688095,0.904118764344118,1.520605129417,4.3422178298929,13.9318691783027,11.5345278868282,11.1128695579963,10.0810502190253,1.26404448251271,0,0.205421914329655,0,0,0,0,0.295379054349154,0,0.15241361331,0,0.584747284438515,0.481059208201647,0.116876902181569,2.26730383615211,0,0,0,2.89784391048286,2.43987218086537,3.84618410961257,0.643105137237198,9.5298699766719,2.25900737046827,0.460325236507177,0,1.71853182343688,0,0.755393897389701,2.02506750069542,0.900642406448441,0.453142408984205,2.07104124700728,0.207574695168353,1.19707462020309,0.512200817262403,1.70174701947806,0.628839487883947,3.67687016900028,9.55660929546946,8.65347240403356,7.06022261101994,8.33900798820532,6.08350319736575,7.54505365544305,7.30403758265083,8.32326981263301,6.4902079919843,8.09699275181225,6.48952225291191,8.48800570040302,8.65380391686944,5.88795680537589,6.85738504770831,7.0990322463735,8.10683045820891,8.57543858130738,6.68176600948847,6.51532480765909,5.67076715905595,8.15516105457313,5.70377278152619,8.41713407486608,4.86403574309114,6.30428687203606,7.7753898202241,6.66228417099654,7.71626443924566,1.24905288968973,4.67863216890817,7.73535794573874,1.91288332068843,2.42650561031467,2.31867835620421|short_description=p2@Cp}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12870 | |||
|HGNC= | |||
|MCL_coexpression_id=1790 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3X8Q5,uniprot:Q61147,uniprot:E9PZD8,uniprot:Q8BU82,uniprot:Q2F3J4 | |||
|association_with_transcript=0bp_to_ENSMUST00000003714,ENSMUST00000091309,ENSMUST00000108329,ENSMUST00000128615,NM_001042611,NM_007752,uc008ory.1,uc008orz.1,uc008osa.1,uc008osb.1,uc008osc.1,uc012cnu.1_5end | |||
|cluster_id=chr3:19857037..19857073,+ | |||
|description=CAGE_peak_2_at_Cp_5end | |||
|id=chr3:19857037..19857073,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.39e-12!47;UBERON:0009569!4.03e-11!66;UBERON:0003914!8.27e-11!47;UBERON:0002100!1.18e-10!98;UBERON:0002365!2.25e-10!25;UBERON:0002330!2.25e-10!25;UBERON:0004111!4.72e-10!122;UBERON:0005177!7.53e-10!85;UBERON:0000466!1.19e-09!79;UBERON:0002107!6.56e-09!22;UBERON:0007499!6.56e-09!22;UBERON:0006925!6.56e-09!22;UBERON:0009497!6.56e-09!22;UBERON:0000015!6.56e-09!22;UBERON:0002423!6.56e-09!22;UBERON:0006235!6.56e-09!22;UBERON:0008835!6.56e-09!22;UBERON:0003894!6.56e-09!22;UBERON:0004161!6.56e-09!22;UBERON:0008836!6.56e-09!22;UBERON:0009854!8.86e-09!23;UBERON:0009856!8.86e-09!23;UBERON:0000025!9.88e-09!114;UBERON:0000468!1.52e-08!333;UBERON:0005172!1.68e-08!49;UBERON:0005173!1.68e-08!49;UBERON:0002417!1.68e-08!49;UBERON:0000916!1.68e-08!49;UBERON:0005085!3.96e-08!13;UBERON:0001048!3.73e-07!147;UBERON:0001444!6.15e-07!11;UBERON:0000970!6.72e-07!9;UBERON:0000019!6.72e-07!9;UBERON:0000047!6.72e-07!9;UBERON:0004088!6.72e-07!9;UBERON:0002104!6.72e-07!9;UBERON:0001456!6.72e-07!9;UBERON:0003072!6.72e-07!9;UBERON:0003071!6.72e-07!9;UBERON:0004128!6.72e-07!9;UBERON:0000020!8.79e-07!12;UBERON:0001032!8.79e-07!12;UBERON:0004456!8.79e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,5.05e-13,45;UBERON:0002365,2.58e-11,25;UBERON:0002330,2.58e-11,25;UBERON:0003914,5.17e-11,47;UBERON:0009569,6.86e-11,66;UBERON:0002100,2.02e-10,90;UBERON:0003104,7.55e-10,61;UBERON:0009142,7.55e-10,61;UBERON:0005177,8.54e-10,79;UBERON:0002107,1.07e-09,22;UBERON:0007499,1.07e-09,22;UBERON:0006925,1.07e-09,22;UBERON:0009497,1.07e-09,22;UBERON:0000015,1.07e-09,22;UBERON:0002423,1.07e-09,22;UBERON:0006235,1.07e-09,22;UBERON:0008835,1.07e-09,22;UBERON:0003894,1.07e-09,22;UBERON:0004161,1.07e-09,22;UBERON:0008836,1.07e-09,22;UBERON:0009854,1.49e-09,23;UBERON:0009856,1.49e-09,23;UBERON:0005085,3.28e-08,13;UBERON:0005172,3.51e-08,49;UBERON:0005173,3.51e-08,49;UBERON:0002417,3.51e-08,49;UBERON:0000916,3.51e-08,49;UBERON:0004111,8.43e-08,122;UBERON:0001048,1.61e-07,134;UBERON:0001444,1.64e-07,11;UBERON:0000970,1.81e-07,9;UBERON:0000019,1.81e-07,9;UBERON:0000047,1.81e-07,9;UBERON:0010312,1.81e-07,9;UBERON:0004088,1.81e-07,9;UBERON:0002104,1.81e-07,9;UBERON:0001456,1.81e-07,9;UBERON:0003072,1.81e-07,9;UBERON:0004128,1.81e-07,9;UBERON:0003071,1.81e-07,9;UBERON:0000033,4.84e-07,13;UBERON:0000025,6.16e-07,114;UBERON:0000020,9.11e-07,12;UBERON:0001032,9.11e-07,12;UBERON:0004456,9.11e-07,12 | |||
|phase1_expression=22.9012851359855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39921408534059,3.34543873024398,1.46837401729345,6.25913075478431,0.436050312760893,0.878744730937887,1.74986909166855,0,1.43752564364972,0,0,0,51.1946277711534,43.8396163106298,42.2851115667503,0.202316460859598,0,0,0.338844532069132,0,0,0,0,1.19840044207362,0.384218305321555,0.207379224616955,0.270011876663381,0,0.856952953211411,1.10434270475807,0,0,0,0,1.27687338085188,1.53606533256243,0.131886287730194,0.365950574409639,0.52091337055676,2.23346399201105,4.50210088025344,2.13917546887534,2.35702868378934,3.55929201997757,1.1183966749518,0.151452386666368,0.226714680320357,12.1743085254705,14.6272059086836,3.39985666853875,7.55584468292944,23.3919510281161,17.9210754838934,6.03911006566533,0,0.259786004602869,0,0.985903938436763,0,0,0,1.94841936910093,1.26679932737549,2.02209778005913,7.65031994117702,8.2860122767095,23.1569736941127,0.173485326766136,2.74018930480927,7.37969591219387,15.0722640552623,17.52071736322,8.92232798440696,3.46072954828123,5.35017620603673,1.76922110389975,1.13236794963186,1.32504911076236,1.45462575940567,1.86391761218122,2.63502717310392,2.09446706813455,0,0,0,0,2.24685959107234,0.457500602818626,0,3.12883776346098,2.04572365864264,1.87009240103604,1.78465389374533,11.4060087512354,20.6515571212754,54.8408385801074,10.5220927943237,27.8457747940186,28.2779588453172,38.3532336485394,32.4015358346787,53.2725788354897,59.9572210933097,46.0075467588269,25.3529303324235,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0,0,0,0,0.207125772535502,0.469052119962192,0,0.473489471170421,0,0.617068451549513,0.465067889500816,1.07309360559848,3.73649095574942,1.97471819896177,4.43252153013557,13.2142159559745,16.2281986042119,16.9053588774109,48.8511364287753,1.26173969138476,2.26390147234426,0,0.793351699990633,0,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0.949058123089023,1.31759163779209,1.00534083520108,1.39269530428806,0.974820435595601,0.898819408654221,1.29682829924817,0.597423819763102,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.631222379012867,1.64414996523069,3.39503340353085,3.29697328466887,5.92306386824642,12.1545577105731,0.333690211432188,0,2.02375901146368,6.49152388443209,21.9471215374699,57.2908166508195,38.2635862809578,47.6677566718604,33.2219309957579,25.8782771749238,64.0082429989826,43.997311909153,19.7011524798747,11.4814344654024,19.7801843758981,13.6717360723287,0,0.325929952884052,0.339490171550376,1.17345124144251,6.365237782789,14.7587057349329,8.97614780145875,13.0837169608139,13.0664166892777,12.756381492599,18.1888279334469,16.577758259126,17.6471851469444,0,0.54390568381871,36.3905562034087,35.043966780701,3.21101179975584,3.28192722458169,0,3.02965112645248,0,1.17131623288992,4.52389135238878,0.716906393857656,1.11399337041197,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,2.89189184779626,5.53566332312248,1.42452482933804,2.60619134965722,5.77395430403874,1.32745138339963,0,0.302323556964751,0,0,1.22974059177571,2.32585463851399,3.27180356529755,2.13898427030833,2.52829406348653,2.10837217149998,2.06271086496374,3.74483566329167,5.04171063287669,0.388076051348264,0.643011105094777,0.532020700926821,0.713475270408282,0.987294123612726,1.2178597964584,0.23467170806371,2.75381692122966,6.3953235435939,3.13283880588812,3.22928853391811,0.663442174209714,1.43246812803764,0.656563598980245,0.874442509889552,2.78137953015765,2.05045056957423,0.412773735926445,0.185194527369712,1.50694765603753,0.956859594047176,1.83022538565218,0,0,0,0.954670618015114,0,0,0,0,0.87345025498471,1.88810084938749,4.79390043206948,0.26175594198403,0.90730481304255,6.83473244395618,1.12738587736838,0.149516546043979,0.330916980914195,0.388902376688095,0.904118764344118,1.520605129417,4.3422178298929,13.9318691783027,11.5345278868282,11.1128695579963,10.0810502190253,1.26404448251271,0,0.205421914329655,0,0,0,0,0.295379054349154,0,0.15241361331,0,0.584747284438515,0.481059208201647,0.116876902181569,2.26730383615211,0,0,0,2.89784391048286,2.43987218086537,3.84618410961257,0.643105137237198,9.5298699766719,2.25900737046827,0.460325236507177,0,1.71853182343688,0,0.755393897389701,2.02506750069542,0.900642406448441,0.453142408984205,2.07104124700728,0.207574695168353,1.19707462020309,0.512200817262403,1.70174701947806,0.628839487883947,3.67687016900028,9.55660929546946,8.65347240403356,7.06022261101994,8.33900798820532,6.08350319736575,7.54505365544305,7.30403758265083,8.32326981263301,6.4902079919843,8.09699275181225,6.48952225291191,8.48800570040302,8.65380391686944,5.88795680537589,6.85738504770831,7.0990322463735,8.10683045820891,8.57543858130738,6.68176600948847,6.51532480765909,5.67076715905595,8.15516105457313,5.70377278152619,8.41713407486608,4.86403574309114,6.30428687203606,7.7753898202241,6.66228417099654,7.71626443924566,1.24905288968973,4.67863216890817,7.73535794573874,1.91288332068843,2.42650561031467,2.31867835620421 | |||
|short_description=p2@Cp | |||
}} |
Revision as of 07:31, 6 August 2015
Short description: | p2@Cp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1790 |
Association with transcript: | 0bp_to_ENSMUST00000003714, ENSMUST00000091309, ENSMUST00000108329, ENSMUST00000128615, NM_001042611, NM_007752, uc008ory.1, uc008orz.1, uc008osa.1, uc008osb.1, uc008osc.1, uc012cnu.1_5end |
EntrezGene: | 12870 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data