FFCP PHASE1:Mm9::chrX:70738575..70738604,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=188|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:70738575..70738604,+|id=chrX:70738575..70738604,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,1.71e-11,7;CL:0000680,9.67e-11,6;CL:0000187,9.67e-11,6;CL:0000056,9.67e-11,6;CL:0000355,9.28e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!4.54e-07!33;UBERON:0004535!4.63e-07!23;UBERON:0001009!4.63e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.85e-08,5;UBERON:0007500,4.85e-08,5;UBERON:0001981,4.85e-08,5;UBERON:0002049,4.85e-08,5;UBERON:0007798,4.85e-08,5;UBERON:0004537,4.85e-08,5;UBERON:0006965,4.85e-08,5;UBERON:0000947,2.90e-07,4;UBERON:0001637,2.90e-07,4;UBERON:0004573,2.90e-07,4;UBERON:0003509,2.90e-07,4;UBERON:0004571,2.90e-07,4;UBERON:0010191,2.90e-07,4;UBERON:0004572,2.90e-07,4;UBERON:0002204,6.15e-07,32;UBERON:0001134,9.28e-07,9;UBERON:0002036,9.28e-07,9;UBERON:0002385,9.28e-07,9;UBERON:0000486,9.28e-07,9;UBERON:0007503,9.28e-07,9;UBERON:0001015,9.28e-07,9;UBERON:0002329,9.28e-07,9;UBERON:0003082,9.28e-07,9;UBERON:0003059,9.28e-07,9;UBERON:0007282,9.28e-07,9;UBERON:0004290,9.28e-07,9;UBERON:0009618,9.28e-07,9|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79125362687656,4.76471576731718,5.32285581268876,8.60630478782843,0,0.878744730937887,0.388859798148567,3.3596741190087,1.43752564364972,0,0,0,18.2654199585522,13.1805382371828,17.0171790451556,0,0,0,3.04960078862219,0.889294796111139,2.2497492932035,4.94433181283487,2.8419204597844,2.99600110518405,2.30530983192933,0.311068836925433,0.270011876663381,0,0.571301968807607,1.10434270475807,0,0,0,1.10115880999389,0.127687338085188,0,0,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0.075726193333184,0.302286240427142,1.15945795480671,0,0,0,0,0,1.12355536105401,18.9177658061644,14.2882302531578,10.2468476607999,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0.776813650941515,0.29688427812965,0,0.608930956624282,0.461230994512117,0.753613202763113,0.352766121407114,0.376999773989026,0.741584903203122,2.4581890676385,0,2.26473589926373,3.3126227769059,1.93950101254089,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.73126918545538,0.995255764880744,0.252722758433675,0.420883711772948,0.130120442962704,0,0.540186389416048,0.60281927134286,0.612328492361951,1.0249097622788,0.562210347358373,2.06962696591213,0,0.189106080167819,0.175951124163949,0.657587197282725,2.22437799380478,3.48252166522167,2.67516777330327,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0.590292695242212,0.462801338662135,0.930135779001631,1.3413670069981,0.467061369468678,0.493679549740441,1.14917224855367,0.56748166682099,0.584799949701329,0.658650345873152,0.134206418760372,0,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0.949058123089023,0,0.251335208800269,0.596869416123452,0.38992817423824,0,0.216138049874694,0.199141273254367,0.379335801906163,0.456994050438915,0,0.203651327845314,0.581857461502877,0.561086559122548,0.948548056863859,0.738050739898011,2.04098346193787,0.987177311374404,0.296452627087149,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,4.31304619582064,0,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,2.03228509183265,0,0.325929952884052,0.848725428875941,0.704070744865506,0.335012514883631,0.714130922658041,0.975668239288994,2.52216230569906,2.43611158613652,2.07291199254733,1.63863314715738,1.38147985492716,2.16973587872267,0,0,0,0.275936746304732,0,0,5.08198330667694,0.504941854408746,0.315508219416257,0,0,0.238968797952552,0,0,0,0.876767573733936,0,0.642642632843614,0.567760340833074,0.178065603667255,1.14020871547503,1.15479086080775,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.354680467284547,1.24858172321449,0.987294123612726,0.304464949114599,0,0.21183207086382,0,0.32977250588296,0.807322133479528,1.26657142349127,0.954978752025092,0.984845398470368,0.291480836629851,0.18542530201051,0.341741761595705,0.619160603889667,1.48155621895769,0,0.27338845544205,0.915112692826091,0,0,0,0,0,0.203319467126849,0.648032044930808,0.836353184057875,0.87345025498471,1.34864346384821,0.41326727862668,0,0.777689839750757,0.621339313086926,0,0.448549638131936,0.330916980914195,0.583353565032143,0.904118764344118,1.85851738039856,1.29092962510329,0.651021924219751,0.419437377702843,0.483168241652012,0.288030006257865,0,0.202725215290164,0.410843828659309,0.25984164595559,0.358053391334963,0,0,0,0.302899349844443,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,3.28422309854724,1.50145980360946,0.549454872801795,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,1.21553358534147,0.209613162627982,0.183843508450014,0.888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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=188 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:70738575..70738604,+ | |||
|description=CAGE_peak_at_chrX:70738575..70738604,+ | |||
|id=chrX:70738575..70738604,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.71e-11,7;CL:0000680,9.67e-11,6;CL:0000187,9.67e-11,6;CL:0000056,9.67e-11,6;CL:0000355,9.28e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!4.54e-07!33;UBERON:0004535!4.63e-07!23;UBERON:0001009!4.63e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.85e-08,5;UBERON:0007500,4.85e-08,5;UBERON:0001981,4.85e-08,5;UBERON:0002049,4.85e-08,5;UBERON:0007798,4.85e-08,5;UBERON:0004537,4.85e-08,5;UBERON:0006965,4.85e-08,5;UBERON:0000947,2.90e-07,4;UBERON:0001637,2.90e-07,4;UBERON:0004573,2.90e-07,4;UBERON:0003509,2.90e-07,4;UBERON:0004571,2.90e-07,4;UBERON:0010191,2.90e-07,4;UBERON:0004572,2.90e-07,4;UBERON:0002204,6.15e-07,32;UBERON:0001134,9.28e-07,9;UBERON:0002036,9.28e-07,9;UBERON:0002385,9.28e-07,9;UBERON:0000486,9.28e-07,9;UBERON:0007503,9.28e-07,9;UBERON:0001015,9.28e-07,9;UBERON:0002329,9.28e-07,9;UBERON:0003082,9.28e-07,9;UBERON:0003059,9.28e-07,9;UBERON:0007282,9.28e-07,9;UBERON:0004290,9.28e-07,9;UBERON:0009618,9.28e-07,9 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79125362687656,4.76471576731718,5.32285581268876,8.60630478782843,0,0.878744730937887,0.388859798148567,3.3596741190087,1.43752564364972,0,0,0,18.2654199585522,13.1805382371828,17.0171790451556,0,0,0,3.04960078862219,0.889294796111139,2.2497492932035,4.94433181283487,2.8419204597844,2.99600110518405,2.30530983192933,0.311068836925433,0.270011876663381,0,0.571301968807607,1.10434270475807,0,0,0,1.10115880999389,0.127687338085188,0,0,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0.075726193333184,0.302286240427142,1.15945795480671,0,0,0,0,0,1.12355536105401,18.9177658061644,14.2882302531578,10.2468476607999,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0.776813650941515,0.29688427812965,0,0.608930956624282,0.461230994512117,0.753613202763113,0.352766121407114,0.376999773989026,0.741584903203122,2.4581890676385,0,2.26473589926373,3.3126227769059,1.93950101254089,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.73126918545538,0.995255764880744,0.252722758433675,0.420883711772948,0.130120442962704,0,0.540186389416048,0.60281927134286,0.612328492361951,1.0249097622788,0.562210347358373,2.06962696591213,0,0.189106080167819,0.175951124163949,0.657587197282725,2.22437799380478,3.48252166522167,2.67516777330327,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0.590292695242212,0.462801338662135,0.930135779001631,1.3413670069981,0.467061369468678,0.493679549740441,1.14917224855367,0.56748166682099,0.584799949701329,0.658650345873152,0.134206418760372,0,0.205809224758569,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0.949058123089023,0,0.251335208800269,0.596869416123452,0.38992817423824,0,0.216138049874694,0.199141273254367,0.379335801906163,0.456994050438915,0,0.203651327845314,0.581857461502877,0.561086559122548,0.948548056863859,0.738050739898011,2.04098346193787,0.987177311374404,0.296452627087149,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,4.31304619582064,0,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,2.03228509183265,0,0.325929952884052,0.848725428875941,0.704070744865506,0.335012514883631,0.714130922658041,0.975668239288994,2.52216230569906,2.43611158613652,2.07291199254733,1.63863314715738,1.38147985492716,2.16973587872267,0,0,0,0.275936746304732,0,0,5.08198330667694,0.504941854408746,0.315508219416257,0,0,0.238968797952552,0,0,0,0.876767573733936,0,0.642642632843614,0.567760340833074,0.178065603667255,1.14020871547503,1.15479086080775,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.354680467284547,1.24858172321449,0.987294123612726,0.304464949114599,0,0.21183207086382,0,0.32977250588296,0.807322133479528,1.26657142349127,0.954978752025092,0.984845398470368,0.291480836629851,0.18542530201051,0.341741761595705,0.619160603889667,1.48155621895769,0,0.27338845544205,0.915112692826091,0,0,0,0,0,0.203319467126849,0.648032044930808,0.836353184057875,0.87345025498471,1.34864346384821,0.41326727862668,0,0.777689839750757,0.621339313086926,0,0.448549638131936,0.330916980914195,0.583353565032143,0.904118764344118,1.85851738039856,1.29092962510329,0.651021924219751,0.419437377702843,0.483168241652012,0.288030006257865,0,0.202725215290164,0.410843828659309,0.25984164595559,0.358053391334963,0,0,0,0.302899349844443,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,3.28422309854724,1.50145980360946,0.549454872801795,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,1.21553358534147,0.209613162627982,0.183843508450014,0.888986911206461,0.618105171716683,0,0.252697211763798,1.2673964994512,1.32038438970253,0.842773567228942,0.640251524048693,0.746661096422973,0.476293691283074,0.347652977834566,0.38581844092741,0,0.294397840268795,0.685738504770831,0.532427418478012,0.476872379894642,0.581385666529314,0.470546902076653,0.507687647350059,0.365855945745545,0.789209134313529,1.08643291076689,0,0.118635018124174,1.18205378850676,0.818462086339379,0.464810523557898,0.771626443924566,0.999242311751784,1.63752125911786,1.07435527024149,3.06061331310149,1.98532277207564,1.62307484934295 | |||
|short_description=p@chrX:70738575..70738604,+ | |||
}} |
Latest revision as of 09:57, 6 August 2015
Short description: | p@chrX:70738575..70738604, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:70738575..70738604, + |
Coexpression cluster: | MCL_coexpression_mm9:188 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.71e-11 | 7 |
muscle precursor cell | 9.67e-11 | 6 |
muscle cell | 9.67e-11 | 6 |
myoblast | 9.67e-11 | 6 |
multi-potent skeletal muscle stem cell | 9.28e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.85e-08 | 5 |
epithelial tube open at both ends | 4.85e-08 | 5 |
blood vessel | 4.85e-08 | 5 |
vasculature | 4.85e-08 | 5 |
vascular system | 4.85e-08 | 5 |
blood vasculature | 4.85e-08 | 5 |
vascular cord | 4.85e-08 | 5 |
aorta | 2.90e-07 | 4 |
artery | 2.90e-07 | 4 |
systemic artery | 2.90e-07 | 4 |
arterial blood vessel | 2.90e-07 | 4 |
systemic arterial system | 2.90e-07 | 4 |
aortic system | 2.90e-07 | 4 |
arterial system | 2.90e-07 | 4 |
musculoskeletal system | 6.15e-07 | 32 |
skeletal muscle tissue | 9.28e-07 | 9 |
striated muscle tissue | 9.28e-07 | 9 |
muscle tissue | 9.28e-07 | 9 |
multilaminar epithelium | 9.28e-07 | 9 |
epithelial vesicle | 9.28e-07 | 9 |
musculature | 9.28e-07 | 9 |
somite | 9.28e-07 | 9 |
myotome | 9.28e-07 | 9 |
presomitic mesoderm | 9.28e-07 | 9 |
presumptive segmental plate | 9.28e-07 | 9 |
dermomyotome | 9.28e-07 | 9 |
trunk paraxial mesoderm | 9.28e-07 | 9 |