FFCP PHASE1:Mm9::chr11:69479664..69479671,-: Difference between revisions
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{{FFCP|EntrezGene=12514|HGNC=|MCL_coexpression_id=38|UniProt=P31996|association_with_transcript=-9bp_to_ENSMUST00000018918_5end|description=CAGE_peak_2_at_Cd68_5end|id=chr11:69479664..69479671,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002194,5.53e-23,4;CL:0000766,5.53e-23,4;CL:0000234,5.53e-23,4;CL:0000576,5.53e-23,4;CL:0000235,5.53e-23,4;CL:0000864,5.53e-23,4;CL:0002009,5.53e-23,4;CL:0000040,5.53e-23,4;CL:0000559,5.53e-23,4;CL:0002092,2.54e-18,3;CL:0002540,2.54e-18,3;CL:0000473,2.97e-13,7;CL:0000557,2.97e-13,7;CL:0002476,1.37e-12,2;CL:0000878,4.37e-12,2;CL:0000129,4.37e-12,2;CL:0002453,4.12e-11,8;CL:0000219,3.60e-09,54;CL:0000333,6.23e-09,10;CL:0000095,6.23e-09,10;CL:0000243,6.23e-09,10;CL:0000123,6.23e-09,10;CL:0000125,6.23e-09,10;CL:0000030,6.23e-09,10;CL:0000339,6.23e-09,10;CL:0000839,3.23e-07,13;CL:0002320,4.39e-07,46;CL:0000134,4.39e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!2.10e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.29e-17,3;UBERON:0000478,2.29e-17,3;UBERON:0000158,2.29e-17,3;UBERON:0002371,4.46e-17,16;UBERON:0005795,4.72e-13,4;UBERON:0000995,4.72e-13,4;UBERON:0001474,3.01e-12,22;UBERON:0004765,3.01e-12,22;UBERON:0001434,3.01e-12,22;UBERON:0001987,4.37e-12,2;UBERON:0003124,4.37e-12,2;UBERON:0004340,4.37e-12,2;UBERON:0003975,1.49e-10,5;UBERON:0002204,3.30e-08,32;UBERON:0002384,4.39e-07,46;UBERON:0000305,6.09e-07,1;UBERON:0003134,8.82e-07,8;UBERON:0006834,8.98e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.468129052643987,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,0,1.36609096991689,0.485510353031154,0.377690453926732,0.304130793658544,0,1.56478268869608,0.218025156380447,0,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0.338844532069132,0,15.7482450524245,17.7995945262055,9.9467216092454,3.59520132622086,3.84218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0.284743361598206,0,0.37863096666592,0.0755715601067855,0,0,2.719885334831,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0.22836775943812,1.03575153458869,0.29688427812965,0,0,0,0.150722640552623,0,0.125666591329675,4.6967043869531,0.578397427679647,0.884610551949874,0.485300549842228,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0.173824320192276,0.255715457330331,0,0,0,0.373220911830279,0.252722758433675,0.841767423545896,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,13.5712155545345,9.79030230873677,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,3.28540391289194,8.26145076368899,0,0.32977250588296,0.322928853391811,0.241251699712623,0.119372344003136,0,0,0,0.170870880797853,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0.954670618015114,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0.443971906748129,0.179427713218951,0.839423081820392,0,3.37828455812128,0.549454872801795,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0.294397840268795,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p2@Cd68}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12514 | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P31996 | |||
|association_with_transcript=-9bp_to_ENSMUST00000018918_5end | |||
|cluster_id=chr11:69479664..69479671,- | |||
|description=CAGE_peak_2_at_Cd68_5end | |||
|id=chr11:69479664..69479671,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.53e-23,4;CL:0000766,5.53e-23,4;CL:0000234,5.53e-23,4;CL:0000576,5.53e-23,4;CL:0000235,5.53e-23,4;CL:0000864,5.53e-23,4;CL:0002009,5.53e-23,4;CL:0000040,5.53e-23,4;CL:0000559,5.53e-23,4;CL:0002092,2.54e-18,3;CL:0002540,2.54e-18,3;CL:0000473,2.97e-13,7;CL:0000557,2.97e-13,7;CL:0002476,1.37e-12,2;CL:0000878,4.37e-12,2;CL:0000129,4.37e-12,2;CL:0002453,4.12e-11,8;CL:0000219,3.60e-09,54;CL:0000333,6.23e-09,10;CL:0000095,6.23e-09,10;CL:0000243,6.23e-09,10;CL:0000123,6.23e-09,10;CL:0000125,6.23e-09,10;CL:0000030,6.23e-09,10;CL:0000339,6.23e-09,10;CL:0000839,3.23e-07,13;CL:0002320,4.39e-07,46;CL:0000134,4.39e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.10e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.29e-17,3;UBERON:0000478,2.29e-17,3;UBERON:0000158,2.29e-17,3;UBERON:0002371,4.46e-17,16;UBERON:0005795,4.72e-13,4;UBERON:0000995,4.72e-13,4;UBERON:0001474,3.01e-12,22;UBERON:0004765,3.01e-12,22;UBERON:0001434,3.01e-12,22;UBERON:0001987,4.37e-12,2;UBERON:0003124,4.37e-12,2;UBERON:0004340,4.37e-12,2;UBERON:0003975,1.49e-10,5;UBERON:0002204,3.30e-08,32;UBERON:0002384,4.39e-07,46;UBERON:0000305,6.09e-07,1;UBERON:0003134,8.82e-07,8;UBERON:0006834,8.98e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.468129052643987,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,0,1.36609096991689,0.485510353031154,0.377690453926732,0.304130793658544,0,1.56478268869608,0.218025156380447,0,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0.338844532069132,0,15.7482450524245,17.7995945262055,9.9467216092454,3.59520132622086,3.84218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0.284743361598206,0,0.37863096666592,0.0755715601067855,0,0,2.719885334831,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0.22836775943812,1.03575153458869,0.29688427812965,0,0,0,0.150722640552623,0,0.125666591329675,4.6967043869531,0.578397427679647,0.884610551949874,0.485300549842228,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0.173824320192276,0.255715457330331,0,0,0,0.373220911830279,0.252722758433675,0.841767423545896,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,13.5712155545345,9.79030230873677,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,3.28540391289194,8.26145076368899,0,0.32977250588296,0.322928853391811,0.241251699712623,0.119372344003136,0,0,0,0.170870880797853,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0.954670618015114,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0.443971906748129,0.179427713218951,0.839423081820392,0,3.37828455812128,0.549454872801795,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0.294397840268795,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p2@Cd68 | |||
}} |
Revision as of 10:26, 6 August 2015
Short description: | p2@Cd68 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cd68_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | -9bp_to_ENSMUST00000018918_5end |
EntrezGene: | 12514 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.53e-23 | 4 |
myeloid leukocyte | 5.53e-23 | 4 |
phagocyte | 5.53e-23 | 4 |
monocyte | 5.53e-23 | 4 |
macrophage | 5.53e-23 | 4 |
tissue-resident macrophage | 5.53e-23 | 4 |
macrophage dendritic cell progenitor | 5.53e-23 | 4 |
monoblast | 5.53e-23 | 4 |
promonocyte | 5.53e-23 | 4 |
bone marrow cell | 2.54e-18 | 3 |
mesenchymal stem cell of the bone marrow | 2.54e-18 | 3 |
defensive cell | 2.97e-13 | 7 |
granulocyte monocyte progenitor cell | 2.97e-13 | 7 |
bone marrow macrophage | 1.37e-12 | 2 |
central nervous system macrophage | 4.37e-12 | 2 |
microglial cell | 4.37e-12 | 2 |
oligodendrocyte precursor cell | 4.12e-11 | 8 |
motile cell | 3.60e-09 | 54 |
migratory neural crest cell | 6.23e-09 | 10 |
neuron associated cell | 6.23e-09 | 10 |
glial cell (sensu Vertebrata) | 6.23e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 6.23e-09 | 10 |
glial cell | 6.23e-09 | 10 |
glioblast | 6.23e-09 | 10 |
glioblast (sensu Vertebrata) | 6.23e-09 | 10 |
myeloid lineage restricted progenitor cell | 3.23e-07 | 13 |
connective tissue cell | 4.39e-07 | 46 |
mesenchymal cell | 4.39e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.29e-17 | 3 |
extraembryonic structure | 2.29e-17 | 3 |
membranous layer | 2.29e-17 | 3 |
bone marrow | 4.46e-17 | 16 |
embryonic uterus | 4.72e-13 | 4 |
uterus | 4.72e-13 | 4 |
bone element | 3.01e-12 | 22 |
skeletal element | 3.01e-12 | 22 |
skeletal system | 3.01e-12 | 22 |
placenta | 4.37e-12 | 2 |
chorion | 4.37e-12 | 2 |
allantois | 4.37e-12 | 2 |
internal female genitalia | 1.49e-10 | 5 |
musculoskeletal system | 3.30e-08 | 32 |
connective tissue | 4.39e-07 | 46 |
amnion | 6.09e-07 | 1 |
female reproductive organ | 8.82e-07 | 8 |
uterus or analog | 8.98e-07 | 1 |