FFCP PHASE1:Mm9::chrX:98469362..98469373,+: Difference between revisions
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{{FFCP|EntrezGene=59024|HGNC=|UniProt=A2AGH8|association_with_transcript=0bp_to_ENSMUST00000117706_5end|description=CAGE_peak_4_at_Med12_5end|id=chrX:98469362..98469373,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,1.66e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!8.30e-16!94;UBERON:0007811!2.52e-13!86;UBERON:0003056!5.63e-08!49;UBERON:0000033!8.13e-08!63;UBERON:0004121!3.61e-07!102;UBERON:0000924!3.61e-07!102;UBERON:0006601!3.61e-07!102;UBERON:0001017!3.84e-07!73;UBERON:0005743!3.84e-07!73;UBERON:0002020!5.10e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0000153,5.85e-12,43;UBERON:0003528,3.32e-09,29;UBERON:0002791,3.32e-09,29;UBERON:0001893,3.32e-09,29;UBERON:0007811,5.71e-09,36;UBERON:0002370,8.19e-09,23;UBERON:0000974,8.19e-09,23;UBERON:0004807,8.19e-09,23;UBERON:0005058,8.19e-09,23;UBERON:0003351,8.19e-09,23;UBERON:0009113,8.19e-09,23;UBERON:0003295,8.19e-09,23;UBERON:0009722,8.19e-09,23;UBERON:0005562,8.19e-09,23;UBERON:0007690,8.19e-09,23;UBERON:0003056,1.79e-08,49;UBERON:0006562,3.15e-08,24;UBERON:0003408,3.15e-08,24;UBERON:0001557,3.15e-08,24;UBERON:0001042,3.15e-08,24;UBERON:0008814,3.15e-08,24;UBERON:0009145,3.15e-08,24;UBERON:0002020,5.61e-08,34;UBERON:0000956,2.15e-07,21;UBERON:0001869,2.15e-07,21;UBERON:0000203,2.15e-07,21;UBERON:0002780,2.15e-07,39;UBERON:0001890,2.15e-07,39;UBERON:0006240,2.15e-07,39;UBERON:0003080,4.81e-07,40;UBERON:0004177,9.19e-07,29;UBERON:0005057,9.19e-07,29;UBERON:0000072,9.38e-07,27|phase1_expression=0.960893082628764,0,0,0.90739263392049,1.50268718983904,0,0.233612640595526,0.387369970324729,0.84473233291,0.234064526321993,1.54096171402954,1.35612670292072,0.684802919724823,0.961624426608971,0.333109761815663,0.607425802169478,2.09868563438444,0.157731082679119,0.548457734422955,0.42438965179803,0.680346321208558,0.0992909512008853,0.261199789138935,0,0,0,0,0.215471232685889,0,0.504060259519861,0,0.635030673459631,0,0,0.288851619751275,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0.439372365468944,0.194429899074283,0.55994568650145,0,0,0.725362142011344,0,0,0,0,2.02316460859598,0.528990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,0.768436610643109,3.31806759387129,2.8351247049655,3.15487442027073,0.856952953211411,0.441737081903227,2.9397791811589,2.58782771749238,4.5960939330501,1.10115880999389,0.893811366596314,0.307213066512487,1.18697658957174,1.82975287204819,3.64639359389732,0.279182999001381,0.56276261003168,0.763991238884051,2.06240009831567,0.996601765593721,0.745597783301202,0.227178579999552,0.151143120213571,0.869593466105033,0,0,0.539703191637817,0,0.448026887097336,0,0.170430322578058,0.779358013808606,0.35333957451034,1.26759077799012,1.28326477414318,0,0,0,0,0,0.5709193985953,0.776813650941515,0.29688427812965,1.21439728736295,0.304465478312141,0.230615497256059,0.452167921657868,0.823120949949934,0.125666591329675,0,0,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0.878342391034642,0.628340120440365,0.510914110417183,0.479260498023681,0,0.127070227073065,0.599162557619291,2.28750301409313,3.14135880282161,1.73824320192276,0.255715457330331,0.83115217823824,0.648965052271031,0.81471491080253,0.373220911830279,0.758168275301024,1.47309299120532,0.780722657776222,0.459804208866946,1.0803727788321,1.05493372485001,2.51735046859913,0.768682321709099,1.21812241927647,1.03481348295606,1.29340795759705,2.08016688184601,2.28736461413134,1.31517439456545,2.22437799380478,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,0.621377317606506,1.40715635988658,0.720248245844059,0.710234206755631,0.983821158737019,0.308534225774757,0.697601834251224,0.536546802799238,0.350296027101508,0.493679549740441,0.820837320395476,0.405344047729279,0.292399974850665,0.439100230582101,0.402619256281115,1.47202963994889,2.16099685996497,0.330418782983798,0.264450566663544,1.2797295032114,1.16118335930219,0.77320476793256,0.80673409849337,0.22237804384487,0,0,0,0.502670417600539,0.795825888164603,1.55971269695296,0,0,0.597423819763102,0.189667900953082,0.913988100877831,1.1270773567308,0.610953983535943,0.775809948670503,0.420814919341911,0.822074982615345,0.442830443938806,0.627994911365499,0,0,0.333690211432188,0.589676985339609,0.674586337154561,0.405720242777006,0.482354319504834,0.763877555344259,0.575392274901621,0.486405680325106,0.823684239564244,1.43768206527355,0,0,0.505157755894224,0.179397413521912,0,0.184753190166605,0,0.977789858652155,1.18821560042632,1.17345124144251,1.00503754465089,1.6663054862021,0.780534591431195,0.630540576424764,0.8858587585951,0.637819074629948,0.81931657357869,0.345369963731791,0.723245292907558,0,0,0.491764273019036,0.551873492609465,0.642202359951168,1.17211686592203,0.819674726883377,0.252470927204373,0.631016438832513,0.780877488593277,0.215423397732799,0.716906393857656,1.33679204449436,1.132306123155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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:59024 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AGH8 | |||
|association_with_transcript=0bp_to_ENSMUST00000117706_5end | |||
|cluster_id=chrX:98469362..98469373,+ | |||
|description=CAGE_peak_4_at_Med12_5end | |||
|id=chrX:98469362..98469373,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.66e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!8.30e-16!94;UBERON:0007811!2.52e-13!86;UBERON:0003056!5.63e-08!49;UBERON:0000033!8.13e-08!63;UBERON:0004121!3.61e-07!102;UBERON:0000924!3.61e-07!102;UBERON:0006601!3.61e-07!102;UBERON:0001017!3.84e-07!73;UBERON:0005743!3.84e-07!73;UBERON:0002020!5.10e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,5.85e-12,43;UBERON:0003528,3.32e-09,29;UBERON:0002791,3.32e-09,29;UBERON:0001893,3.32e-09,29;UBERON:0007811,5.71e-09,36;UBERON:0002370,8.19e-09,23;UBERON:0000974,8.19e-09,23;UBERON:0004807,8.19e-09,23;UBERON:0005058,8.19e-09,23;UBERON:0003351,8.19e-09,23;UBERON:0009113,8.19e-09,23;UBERON:0003295,8.19e-09,23;UBERON:0009722,8.19e-09,23;UBERON:0005562,8.19e-09,23;UBERON:0007690,8.19e-09,23;UBERON:0003056,1.79e-08,49;UBERON:0006562,3.15e-08,24;UBERON:0003408,3.15e-08,24;UBERON:0001557,3.15e-08,24;UBERON:0001042,3.15e-08,24;UBERON:0008814,3.15e-08,24;UBERON:0009145,3.15e-08,24;UBERON:0002020,5.61e-08,34;UBERON:0000956,2.15e-07,21;UBERON:0001869,2.15e-07,21;UBERON:0000203,2.15e-07,21;UBERON:0002780,2.15e-07,39;UBERON:0001890,2.15e-07,39;UBERON:0006240,2.15e-07,39;UBERON:0003080,4.81e-07,40;UBERON:0004177,9.19e-07,29;UBERON:0005057,9.19e-07,29;UBERON:0000072,9.38e-07,27 | |||
|phase1_expression=0.960893082628764,0,0,0.90739263392049,1.50268718983904,0,0.233612640595526,0.387369970324729,0.84473233291,0.234064526321993,1.54096171402954,1.35612670292072,0.684802919724823,0.961624426608971,0.333109761815663,0.607425802169478,2.09868563438444,0.157731082679119,0.548457734422955,0.42438965179803,0.680346321208558,0.0992909512008853,0.261199789138935,0,0,0,0,0.215471232685889,0,0.504060259519861,0,0.635030673459631,0,0,0.288851619751275,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0.439372365468944,0.194429899074283,0.55994568650145,0,0,0.725362142011344,0,0,0,0,2.02316460859598,0.528990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,0.768436610643109,3.31806759387129,2.8351247049655,3.15487442027073,0.856952953211411,0.441737081903227,2.9397791811589,2.58782771749238,4.5960939330501,1.10115880999389,0.893811366596314,0.307213066512487,1.18697658957174,1.82975287204819,3.64639359389732,0.279182999001381,0.56276261003168,0.763991238884051,2.06240009831567,0.996601765593721,0.745597783301202,0.227178579999552,0.151143120213571,0.869593466105033,0,0,0.539703191637817,0,0.448026887097336,0,0.170430322578058,0.779358013808606,0.35333957451034,1.26759077799012,1.28326477414318,0,0,0,0,0,0.5709193985953,0.776813650941515,0.29688427812965,1.21439728736295,0.304465478312141,0.230615497256059,0.452167921657868,0.823120949949934,0.125666591329675,0,0,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0.878342391034642,0.628340120440365,0.510914110417183,0.479260498023681,0,0.127070227073065,0.599162557619291,2.28750301409313,3.14135880282161,1.73824320192276,0.255715457330331,0.83115217823824,0.648965052271031,0.81471491080253,0.373220911830279,0.758168275301024,1.47309299120532,0.780722657776222,0.459804208866946,1.0803727788321,1.05493372485001,2.51735046859913,0.768682321709099,1.21812241927647,1.03481348295606,1.29340795759705,2.08016688184601,2.28736461413134,1.31517439456545,2.22437799380478,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,0.621377317606506,1.40715635988658,0.720248245844059,0.710234206755631,0.983821158737019,0.308534225774757,0.697601834251224,0.536546802799238,0.350296027101508,0.493679549740441,0.820837320395476,0.405344047729279,0.292399974850665,0.439100230582101,0.402619256281115,1.47202963994889,2.16099685996497,0.330418782983798,0.264450566663544,1.2797295032114,1.16118335930219,0.77320476793256,0.80673409849337,0.22237804384487,0,0,0,0.502670417600539,0.795825888164603,1.55971269695296,0,0,0.597423819763102,0.189667900953082,0.913988100877831,1.1270773567308,0.610953983535943,0.775809948670503,0.420814919341911,0.822074982615345,0.442830443938806,0.627994911365499,0,0,0.333690211432188,0.589676985339609,0.674586337154561,0.405720242777006,0.482354319504834,0.763877555344259,0.575392274901621,0.486405680325106,0.823684239564244,1.43768206527355,0,0,0.505157755894224,0.179397413521912,0,0.184753190166605,0,0.977789858652155,1.18821560042632,1.17345124144251,1.00503754465089,1.6663054862021,0.780534591431195,0.630540576424764,0.8858587585951,0.637819074629948,0.81931657357869,0.345369963731791,0.723245292907558,0,0,0.491764273019036,0.551873492609465,0.642202359951168,1.17211686592203,0.819674726883377,0.252470927204373,0.631016438832513,0.780877488593277,0.215423397732799,0.716906393857656,1.33679204449436,1.13230612315533,0,1.16902343164525,0.790575555893047,3.53453448063988,0.99358059645788,0.890328018336276,1.46598263418218,0.659880491890142,0,1.45668381692989,0.302323556964751,0.565815239267694,0,0,0.516856586336442,0.363533729477506,0,0,1.05418608574999,0,0,1.08036656418786,0.646793418913773,0.857348140126369,0.354680467284547,1.07021290561242,0.987294123612726,1.522324745573,0.938686832254841,0.63549621259146,0.220528398054962,1.31909002353184,1.29171541356724,1.02531972377865,0.596861720015682,1.64140899745061,0,0.741701208042039,0.683483523191411,1.23832120777933,0.740778109478847,0.941842285023455,0.410082683163076,0.457556346413045,0.509935289981566,0.139951452323658,0.276399947608848,0,0.632671987162271,1.01659733563424,0.540026704109006,0.418176592028937,0.436725127492355,0.944050424693745,0.41326727862668,0.26175594198403,0,0,0,1.49516546043979,0.992750942742586,1.55560950675238,1.29159823477731,1.01373675294467,1.17357238645754,0.911430693907651,2.83120229949419,1.93267296660805,2.01621004380506,6.00421129193539,0.405450430580328,1.23253148597793,1.16928740680016,1.79026695667481,2.38417625737518,3.24527713703916,2.36303243479324,3.23092639834072,3.81034033274999,4.2346997757473,4.97035191772737,4.71438024037614,5.2594605981706,0.453460767230423,0,0.269141569828427,0.167884616364078,1.15913756419314,0.187682475451182,0.73260649706906,0,0,0,0.920650473014354,0.572895513439397,0.859265911718438,2.74033007908257,3.7769694869485,2.02506750069542,1.80128481289688,0,1.03552062350364,0.518936737920883,0.798049746802062,0.8536680287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| |||
|short_description=p4@Med12 | |||
}} |
Revision as of 11:08, 6 August 2015
Short description: | p4@Med12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Med12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000117706_5end |
EntrezGene: | 59024 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.66e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 5.85e-12 | 43 |
brain grey matter | 3.32e-09 | 29 |
regional part of telencephalon | 3.32e-09 | 29 |
telencephalon | 3.32e-09 | 29 |
craniocervical region | 5.71e-09 | 36 |
thymus | 8.19e-09 | 23 |
neck | 8.19e-09 | 23 |
respiratory system epithelium | 8.19e-09 | 23 |
hemolymphoid system gland | 8.19e-09 | 23 |
pharyngeal epithelium | 8.19e-09 | 23 |
thymic region | 8.19e-09 | 23 |
pharyngeal gland | 8.19e-09 | 23 |
entire pharyngeal arch endoderm | 8.19e-09 | 23 |
thymus primordium | 8.19e-09 | 23 |
early pharyngeal endoderm | 8.19e-09 | 23 |
pre-chordal neural plate | 1.79e-08 | 49 |
pharynx | 3.15e-08 | 24 |
gland of gut | 3.15e-08 | 24 |
upper respiratory tract | 3.15e-08 | 24 |
chordate pharynx | 3.15e-08 | 24 |
pharyngeal arch system | 3.15e-08 | 24 |
pharyngeal region of foregut | 3.15e-08 | 24 |
gray matter | 5.61e-08 | 34 |
cerebral cortex | 2.15e-07 | 21 |
cerebral hemisphere | 2.15e-07 | 21 |
pallium | 2.15e-07 | 21 |
regional part of forebrain | 2.15e-07 | 39 |
forebrain | 2.15e-07 | 39 |
future forebrain | 2.15e-07 | 39 |
anterior neural tube | 4.81e-07 | 40 |
hemopoietic organ | 9.19e-07 | 29 |
immune organ | 9.19e-07 | 29 |
segment of respiratory tract | 9.38e-07 | 27 |