FFCP PHASE2:Hg19::chr14:70655655..70655683,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6547 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11070 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11070 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96QG2,P57103,Q96QG1 | ||
|association_with_transcript=103bp_to_ENST00000356921,ENST00000357887,ENST00000381269,ENST00000494208,NM_033262,NM_058240,NM_182932,NM_183002,uc001xlw.2,uc001xlx.2,uc001xly.2,uc001xlz.2,uc010ara.2_5end | |association_with_transcript=103bp_to_ENST00000356921,ENST00000357887,ENST00000381269,ENST00000494208,NM_033262,NM_058240,NM_182932,NM_183002,uc001xlw.2,uc001xlx.2,uc001xly.2,uc001xlz.2,uc010ara.2_5end | ||
|cluster_id=chr14:70655655..70655683,- | |cluster_id=chr14:70655655..70655683,- | ||
Latest revision as of 20:15, 15 September 2015
| Short description: | p1@SLC8A3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SLC8A3_5end |
| Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
| Association with transcript: | 103bp_to_ENST00000356921, ENST00000357887, ENST00000381269, ENST00000494208, NM_033262, NM_058240, NM_182932, NM_183002, uc001xlw.2, uc001xlx.2, uc001xly.2, uc001xlz.2, uc010ara.2_5end |
| EntrezGene: | SLC8A3 |
| HGNC: | 11070 |
| UniProt: | Q96QG2P57103Q96QG1 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@SLC8A3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mast cell | 7.02e-12 | 5 |
| basophil mast progenitor cell | 7.02e-12 | 5 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 2.51e-55 | 56 |
| neural rod | 2.51e-55 | 56 |
| future spinal cord | 2.51e-55 | 56 |
| neural keel | 2.51e-55 | 56 |
| regional part of nervous system | 4.94e-53 | 53 |
| regional part of brain | 4.94e-53 | 53 |
| nervous system | 1.36e-48 | 89 |
| central nervous system | 1.83e-48 | 81 |
| regional part of forebrain | 2.49e-48 | 41 |
| forebrain | 2.49e-48 | 41 |
Showing 1 to 10 of 61 entries
