FFCP PHASE1:Hg19::chr5:147258266..147258280,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=117156 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18391 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96PL1,Q2L6B3 | ||
|association_with_transcript=0bp_to_ENST00000296694,NM_054023,uc003lot.1_5end | |association_with_transcript=0bp_to_ENST00000296694,NM_054023,uc003lot.1_5end | ||
|cluster_id=chr5:147258266..147258280,+ | |cluster_id=chr5:147258266..147258280,+ | ||
Latest revision as of 23:06, 15 September 2015
| Short description: | p1@SCGB3A2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SCGB3A2_5end |
| Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
| Association with transcript: | 0bp_to_ENST00000296694, NM_054023, uc003lot.1_5end |
| EntrezGene: | SCGB3A2 |
| HGNC: | 18391 |
| UniProt: | Q96PL1Q2L6B3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SCGB3A2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| GAG secreting cell | 2.32e-10 | 9 |
| carbohydrate secreting cell | 2.32e-10 | 9 |
| chondroblast | 4.64e-09 | 6 |
| chondrocyte | 4.64e-09 | 6 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| open tracheal system trachea | 2.43e-13 | 2 |
| throat | 4.17e-13 | 2 |
| pituitary gland | 3.05e-12 | 2 |
| lower lobe of right lung | 1.65e-07 | 1 |
| right lung lobe | 1.65e-07 | 1 |
| lower lobe of lung | 1.65e-07 | 1 |
| lobe of lung | 1.65e-07 | 1 |
| right lung | 1.65e-07 | 1 |
| surface | 2.37e-07 | 1 |
| chest muscle | 6.49e-07 | 1 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| heart disease | 2.04e-12 | 2 |
| vascular disease | 3.40e-07 | 1 |
| ischemia | 3.40e-07 | 1 |
| extrinsic cardiomyopathy | 3.40e-07 | 1 |
| myocardial ischemia | 3.40e-07 | 1 |
| myocardial infarction | 3.40e-07 | 1 |
| epithelioid sarcoma | 8.67e-07 | 1 |
Showing 1 to 7 of 7 entries
