FFCP PHASE2:Hg19::chr7:135412540..135412552,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:26266 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:15827 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=26266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=15827 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 13:19, 16 September 2015
| Short description: | p2@SLC13A4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SLC13A4_5end |
| Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
| Association with transcript: | 369bp_to_ENST00000478310_5end |
| EntrezGene: | SLC13A4 |
| HGNC: | 15827 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SLC13A4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| medulla oblongata | 5.01e-55 | 3 |
| myelencephalon | 5.01e-55 | 3 |
| future myelencephalon | 5.01e-55 | 3 |
| multi cell component structure | 9.84e-37 | 2 |
| neuron projection bundle | 9.84e-37 | 2 |
| brainstem | 5.91e-28 | 6 |
| retina | 1.93e-27 | 6 |
| photoreceptor array | 1.93e-27 | 6 |
| posterior segment of eyeball | 1.93e-27 | 6 |
| segmental subdivision of nervous system | 1.20e-22 | 13 |
Showing 1 to 10 of 80 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system cancer | 4.85e-07 | 11 |
Showing 1 to 1 of 1 entries
