FFCP PHASE2:Hg19::chr4:178230985..178230997,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:55247 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:24573 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=55247 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=24573 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8TAT5 | ||
|association_with_transcript=0bp_to_ENST00000264596,NM_018248,uc003iut.2,uc010irs.2_5end | |association_with_transcript=0bp_to_ENST00000264596,NM_018248,uc003iut.2,uc010irs.2_5end | ||
|cluster_id=chr4:178230985..178230997,+ | |cluster_id=chr4:178230985..178230997,+ | ||
Latest revision as of 22:53, 16 September 2015
| Short description: | p3@NEIL3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_NEIL3_5end |
| Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
| Association with transcript: | 0bp_to_ENST00000264596, NM_018248, uc003iut.2, uc010irs.2_5end |
| EntrezGene: | NEIL3 |
| HGNC: | 24573 |
| UniProt: | Q8TAT5 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@NEIL3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| migratory neural crest cell | 2.58e-11 | 41 |
| neurectodermal cell | 1.10e-09 | 59 |
| neural cell | 8.73e-08 | 25 |
| ectodermal cell | 4.77e-07 | 72 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| cancer | 4.36e-30 | 235 |
| disease of cellular proliferation | 1.00e-28 | 239 |
| organ system cancer | 9.07e-19 | 137 |
| leukemia | 1.62e-17 | 39 |
| hematologic cancer | 3.28e-16 | 51 |
| immune system cancer | 3.28e-16 | 51 |
| cell type cancer | 3.18e-12 | 143 |
| myeloid leukemia | 8.29e-11 | 31 |
| carcinoma | 8.88e-09 | 106 |
Showing 1 to 9 of 9 entries
