FFCP PHASE2:Hg19::chr17:7166554..7166565,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:1366 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:2049 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2049 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O95471 | ||
|association_with_transcript=-42bp_to_ENST00000360325,NM_001185022,uc002gfn.3_5end | |association_with_transcript=-42bp_to_ENST00000360325,NM_001185022,uc002gfn.3_5end | ||
|cluster_id=chr17:7166554..7166565,- | |cluster_id=chr17:7166554..7166565,- | ||
Latest revision as of 06:29, 17 September 2015
| Short description: | p4@CLDN7 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_CLDN7_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -42bp_to_ENST00000360325, NM_001185022, uc002gfn.3_5end |
| EntrezGene: | CLDN7 |
| HGNC: | 2049 |
| UniProt: | O95471 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@CLDN7 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 5.50e-12 | 253 |
| endothelial cell of artery | 2.59e-10 | 9 |
| aortic endothelial cell | 2.72e-10 | 6 |
| kidney tubule cell | 5.15e-10 | 10 |
| nephron tubule epithelial cell | 5.15e-10 | 10 |
| epithelial cell of nephron | 2.91e-09 | 15 |
| thoracic aorta endothelial cell | 1.01e-08 | 2 |
| kidney cortical cell | 2.67e-08 | 12 |
| renal cortical epithelial cell | 2.67e-08 | 12 |
| kidney cell | 4.39e-08 | 17 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| larynx | 3.16e-19 | 9 |
| respiratory primordium | 6.80e-14 | 38 |
| endoderm of foregut | 6.80e-14 | 38 |
| segment of respiratory tract | 1.10e-10 | 47 |
| respiratory tract | 1.66e-10 | 54 |
| endothelial tube | 2.59e-10 | 9 |
| arterial system endothelium | 2.59e-10 | 9 |
| endothelium of artery | 2.59e-10 | 9 |
| nephron tubule epithelium | 5.15e-10 | 10 |
| urinary system structure | 2.01e-09 | 47 |
Showing 1 to 10 of 38 entries
