FFCP PHASE2:Hg19::chr19:39694894..39694909,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:342898 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:18442 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=342898 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18442 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q0VAF6 | ||
|association_with_transcript=0bp_to_ENST00000318438,NM_001080468,uc002okr.2_5end | |association_with_transcript=0bp_to_ENST00000318438,NM_001080468,uc002okr.2_5end | ||
|cluster_id=chr19:39694894..39694909,- | |cluster_id=chr19:39694894..39694909,- | ||
Latest revision as of 21:29, 17 September 2015
| Short description: | p1@SYCN |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SYCN_5end |
| Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
| Association with transcript: | 0bp_to_ENST00000318438, NM_001080468, uc002okr.2_5end |
| EntrezGene: | SYCN |
| HGNC: | 18442 |
| UniProt: | Q0VAF6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SYCN |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| surface | 1.40e-12 | 1 |
| uterus or analog | 3.85e-12 | 1 |
| pulmonary valve | 4.81e-12 | 1 |
| semi-lunar valve | 4.81e-12 | 1 |
| small intestine | 7.11e-10 | 4 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| heart disease | 7.65e-23 | 2 |
| vascular disease | 2.46e-12 | 1 |
| ischemia | 2.46e-12 | 1 |
| extrinsic cardiomyopathy | 2.46e-12 | 1 |
| myocardial ischemia | 2.46e-12 | 1 |
| myocardial infarction | 2.46e-12 | 1 |
| cardiovascular system disease | 6.37e-12 | 4 |
Showing 1 to 7 of 7 entries
