FFCP PHASE2:Hg19::chr8:38261849..38261864,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:137994 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:14648 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=137994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=14648 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 03:35, 18 September 2015
| Short description: | p2@LETM2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_LETM2_5end |
| Coexpression cluster: | C2011_mucinous_mesothelioma_squamous_glioblastoma_anaplastic_Mallassezderived_amniotic |
| Association with transcript: | 0bp_to_ENST00000530448_5end |
| EntrezGene: | LETM2 |
| HGNC: | 14648 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@LETM2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 8.54e-26 | 253 |
| embryonic cell | 4.63e-23 | 250 |
| squamous epithelial cell | 1.18e-18 | 63 |
| mesodermal cell | 4.81e-18 | 121 |
| lining cell | 1.95e-14 | 58 |
| barrier cell | 1.95e-14 | 58 |
| mesothelial cell | 7.14e-13 | 19 |
| endo-epithelial cell | 3.75e-09 | 42 |
| respiratory epithelial cell | 1.34e-07 | 13 |
| extraembryonic cell | 2.27e-07 | 19 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| vasculature | 1.10e-10 | 78 |
| vascular system | 1.10e-10 | 78 |
| vessel | 2.25e-10 | 68 |
| splanchnic layer of lateral plate mesoderm | 5.43e-10 | 83 |
| epithelial tube open at both ends | 1.40e-09 | 59 |
| blood vessel | 1.40e-09 | 59 |
| blood vasculature | 1.40e-09 | 59 |
| vascular cord | 1.40e-09 | 59 |
| epithelial tube | 1.10e-08 | 117 |
| unilaminar epithelium | 1.49e-08 | 148 |
Showing 1 to 10 of 18 entries
| Ontology term | p-value | n |
|---|---|---|
| female reproductive organ cancer | 3.35e-07 | 27 |
| ovarian cancer | 4.59e-07 | 14 |
| reproductive organ cancer | 6.50e-07 | 29 |
Showing 1 to 3 of 3 entries
