FFCP PHASE2:Hg19::chr4:5894777..5894799,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:1400 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:2365 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2365 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A0EJG6,B3KT07,Q96I11 | ||
|association_with_transcript=0bp_to_ENST00000324989,NM_001014809,uc003gis.2_5end | |association_with_transcript=0bp_to_ENST00000324989,NM_001014809,uc003gis.2_5end | ||
|cluster_id=chr4:5894777..5894799,- | |cluster_id=chr4:5894777..5894799,- | ||
Latest revision as of 04:05, 18 September 2015
| Short description: | p3@CRMP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_CRMP1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000324989, NM_001014809, uc003gis.2_5end |
| EntrezGene: | CRMP1 |
| HGNC: | 2365 |
| UniProt: | A0EJG6B3KT07Q96I11 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@CRMP1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 3.16e-18 | 8 |
| neuron | 3.37e-14 | 6 |
| neuroblast | 3.37e-14 | 6 |
| electrically signaling cell | 3.37e-14 | 6 |
| neural cell | 8.13e-09 | 25 |
| embryonic stem cell | 4.74e-07 | 5 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 4.21e-86 | 89 |
| central nervous system | 2.29e-83 | 81 |
| regional part of nervous system | 9.31e-74 | 53 |
| regional part of brain | 9.31e-74 | 53 |
| neural tube | 5.94e-73 | 56 |
| neural rod | 5.94e-73 | 56 |
| future spinal cord | 5.94e-73 | 56 |
| neural keel | 5.94e-73 | 56 |
| brain | 2.69e-66 | 68 |
| future brain | 2.69e-66 | 68 |
Showing 1 to 10 of 83 entries
