FFCP PHASE1:Hg19::chr1:45987548..45987566,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9352 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 07:52, 18 September 2015
| Short description: | p1@PRDX1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_PRDX1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -9bp_to_ENST00000483583_5end |
| EntrezGene: | PRDX1 |
| HGNC: | 9352 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@PRDX1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 4.29e-17 | 250 |
| mesodermal cell | 8.66e-17 | 121 |
| epithelial cell | 5.08e-15 | 253 |
| electrically responsive cell | 4.51e-10 | 61 |
| electrically active cell | 4.51e-10 | 61 |
| muscle precursor cell | 8.42e-10 | 58 |
| myoblast | 8.42e-10 | 58 |
| multi-potent skeletal muscle stem cell | 8.42e-10 | 58 |
| muscle cell | 2.78e-09 | 55 |
| smooth muscle cell | 2.36e-08 | 43 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| unilaminar epithelium | 6.80e-11 | 148 |
| epithelial tube | 2.93e-10 | 117 |
| trunk | 1.07e-09 | 199 |
| splanchnic layer of lateral plate mesoderm | 1.17e-09 | 83 |
| multilaminar epithelium | 1.64e-09 | 83 |
| epithelial vesicle | 1.85e-09 | 78 |
| artery | 1.94e-09 | 42 |
| arterial blood vessel | 1.94e-09 | 42 |
| arterial system | 1.94e-09 | 42 |
| somite | 2.89e-09 | 71 |
Showing 1 to 10 of 36 entries
