FFCP PHASE2:Hg19::chr19:4402613..4402658,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:10036 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1910 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1910 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JLF8 | ||
|association_with_transcript=0bp_to_ENST00000344143,ENST00000535117_5end | |association_with_transcript=0bp_to_ENST00000344143,ENST00000535117_5end | ||
|cluster_id=chr19:4402613..4402658,+ | |cluster_id=chr19:4402613..4402658,+ | ||
Latest revision as of 11:13, 18 September 2015
| Short description: | p1@CHAF1A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CHAF1A_5end |
| Coexpression cluster: | C1011_acute_granulocyte_Hodgkin_neuroepithelioma_retinoblastoma_hepatoblastoma_merkel |
| Association with transcript: | 0bp_to_ENST00000344143, ENST00000535117_5end |
| EntrezGene: | CHAF1A |
| HGNC: | 1910 |
| UniProt: | C9JLF8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CHAF1A |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 2.28e-10 | 253 |
| neural cell | 9.52e-08 | 25 |
| migratory neural crest cell | 1.50e-07 | 41 |
| neurectodermal cell | 8.14e-07 | 59 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| cancer | 2.20e-46 | 235 |
| disease of cellular proliferation | 5.91e-45 | 239 |
| hematologic cancer | 5.29e-23 | 51 |
| immune system cancer | 5.29e-23 | 51 |
| cell type cancer | 6.55e-23 | 143 |
| organ system cancer | 1.19e-20 | 137 |
| leukemia | 2.36e-19 | 39 |
| carcinoma | 1.46e-16 | 106 |
| myeloid leukemia | 1.93e-15 | 31 |
| germ cell and embryonal cancer | 2.58e-07 | 22 |
Showing 1 to 10 of 11 entries
