FFCP PHASE2:Hg19::chr1:53556639..53556664,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6512 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10945 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10945 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 13:29, 18 September 2015
| Short description: | p2@SLC1A7 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SLC1A7_5end |
| Coexpression cluster: | C3986_hepatoblastoma_gall_Mesenchymal_Natural_locus_tongue_mesothelioma |
| Association with transcript: | 0bp_to_ENST00000488036, uc001cux.2_5end |
| EntrezGene: | SLC1A7 |
| HGNC: | 10945 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SLC1A7 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatic stem cell | 1.51e-07 | 2 |
| hepatic mesenchymal stem cell | 1.51e-07 | 2 |
| fibroblast of tunica adventitia of artery | 7.93e-07 | 4 |
| fibroblast of the aortic adventitia | 7.93e-07 | 4 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 2.21e-21 | 114 |
| neural tube | 6.14e-12 | 56 |
| neural rod | 6.14e-12 | 56 |
| future spinal cord | 6.14e-12 | 56 |
| neural keel | 6.14e-12 | 56 |
| regional part of nervous system | 3.08e-11 | 53 |
| regional part of brain | 3.08e-11 | 53 |
| blood vessel layer | 2.27e-10 | 7 |
| neural plate | 5.85e-09 | 82 |
| presumptive neural plate | 5.85e-09 | 82 |
Showing 1 to 10 of 30 entries
