FFCP PHASE1:Hg19::chr7:49814902..49814919,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=375567 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | ||
|HGNC= | |HGNC=30200 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q2TAL6 | ||
|association_with_transcript=-112bp_to_AB292671_5end | |association_with_transcript=-112bp_to_AB292671_5end | ||
|cluster_id=chr7:49814902..49814919,+ | |cluster_id=chr7:49814902..49814919,+ | ||
Latest revision as of 22:38, 18 September 2015
| Short description: | p3@VWC2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_VWC2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -112bp_to_AB292671_5end |
| EntrezGene: | VWC2 |
| HGNC: | 30200 |
| UniProt: | Q2TAL6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@VWC2 |
|---|
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3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 7.01e-21 | 53 |
| regional part of brain | 7.01e-21 | 53 |
| neural tube | 9.19e-20 | 56 |
| neural rod | 9.19e-20 | 56 |
| future spinal cord | 9.19e-20 | 56 |
| neural keel | 9.19e-20 | 56 |
| insula | 2.71e-19 | 1 |
| occipital pole | 3.25e-19 | 1 |
| pole of cerebral hemisphere | 3.25e-19 | 1 |
| mitral valve | 4.69e-19 | 1 |
Showing 1 to 10 of 64 entries
