FFCP PHASE2:Hg19::chrX:11684027..11684051,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:395 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:676 |TSSclassif...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=395 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=676 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O43182,Q59HG6 | ||
|association_with_transcript=-206bp_to_ENST00000337414,ENST00000380718,ENST00000495242,NM_006125,NM_013427,uc004cuo.1,uc004cup.1,uc004cur.1_5end | |association_with_transcript=-206bp_to_ENST00000337414,ENST00000380718,ENST00000495242,NM_006125,NM_013427,uc004cuo.1,uc004cup.1,uc004cur.1_5end | ||
|cluster_id=chrX:11684027..11684051,- | |cluster_id=chrX:11684027..11684051,- | ||
Latest revision as of 03:37, 19 September 2015
| Short description: | p2@ARHGAP6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_ARHGAP6_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -206bp_to_ENST00000337414, ENST00000380718, ENST00000495242, NM_006125, NM_013427, uc004cuo.1, uc004cup.1, uc004cur.1_5end |
| EntrezGene: | ARHGAP6 |
| HGNC: | 676 |
| UniProt: | O43182Q59HG6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@ARHGAP6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| kidney tubule cell | 6.67e-07 | 10 |
| nephron tubule epithelial cell | 6.67e-07 | 10 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| cavitated compound organ | 2.19e-09 | 31 |
| abdomen element | 1.27e-08 | 54 |
| abdominal segment element | 1.27e-08 | 54 |
| kidney | 1.01e-07 | 26 |
| kidney mesenchyme | 1.01e-07 | 26 |
| upper urinary tract | 1.01e-07 | 26 |
| kidney rudiment | 1.01e-07 | 26 |
| kidney field | 1.01e-07 | 26 |
| trunk region element | 1.07e-07 | 101 |
| abdominal segment of trunk | 1.98e-07 | 60 |
Showing 1 to 10 of 13 entries
