FFCP PHASE2:Hg19::chr3:71294213..71294240,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:27086 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:3823 |TSSclas...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=27086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=3823 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9H334,Q548T7 | ||
|association_with_transcript=75bp_to_ENST00000498215,NM_001244814,uc003dol.2_5end | |association_with_transcript=75bp_to_ENST00000498215,NM_001244814,uc003dol.2_5end | ||
|cluster_id=chr3:71294213..71294240,- | |cluster_id=chr3:71294213..71294240,- | ||
Latest revision as of 13:28, 19 September 2015
| Short description: | p30@FOXP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_30_at_FOXP1_5end |
| Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
| Association with transcript: | 75bp_to_ENST00000498215, NM_001244814, uc003dol.2_5end |
| EntrezGene: | FOXP1 |
| HGNC: | 3823 |
| UniProt: | Q9H334Q548T7 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p30@FOXP1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| corpus striatum | 1.06e-19 | 4 |
| striatum | 1.06e-19 | 4 |
| ventral part of telencephalon | 1.06e-19 | 4 |
| future corpus striatum | 1.06e-19 | 4 |
| adult organism | 1.30e-15 | 114 |
| caudate-putamen | 1.53e-15 | 3 |
| dorsal striatum | 1.53e-15 | 3 |
| telencephalic nucleus | 2.57e-11 | 7 |
| large intestine | 3.30e-11 | 11 |
| caudate nucleus | 6.67e-11 | 2 |
Showing 1 to 10 of 23 entries
