FFCP PHASE2:Hg19::chr19:54705025..54705034,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6203 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10442 |TSSclas...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10442 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JM19 | ||
|association_with_transcript=0bp_to_ENST00000441429,ENST00000460761,uc002qeb.2,uc002qec.2,uc002qed.1_5end | |association_with_transcript=0bp_to_ENST00000441429,ENST00000460761,uc002qeb.2,uc002qec.2,uc002qed.1_5end | ||
|cluster_id=chr19:54705025..54705034,+ | |cluster_id=chr19:54705025..54705034,+ | ||
Latest revision as of 21:33, 19 September 2015
| Short description: | p7@RPS9 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_RPS9_5end |
| Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
| Association with transcript: | 0bp_to_ENST00000441429, ENST00000460761, uc002qeb.2, uc002qec.2, uc002qed.1_5end |
| EntrezGene: | RPS9 |
| HGNC: | 10442 |
| UniProt: | C9JM19 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@RPS9 |
|---|
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3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 5.71e-93 | 42 |
| CD14-positive, CD16-negative classical monocyte | 5.71e-93 | 42 |
| defensive cell | 3.76e-86 | 48 |
| phagocyte | 3.76e-86 | 48 |
| myeloid lineage restricted progenitor cell | 6.30e-72 | 66 |
| monopoietic cell | 1.92e-67 | 59 |
| monocyte | 1.92e-67 | 59 |
| monoblast | 1.92e-67 | 59 |
| promonocyte | 1.92e-67 | 59 |
| granulocyte monocyte progenitor cell | 1.34e-66 | 67 |
Showing 1 to 10 of 27 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 6.46e-58 | 76 |
| bone element | 3.58e-53 | 82 |
| skeletal element | 8.08e-48 | 90 |
| immune system | 4.79e-46 | 93 |
| hematopoietic system | 2.49e-43 | 98 |
| blood island | 2.49e-43 | 98 |
| skeletal system | 2.56e-42 | 100 |
| hemolymphoid system | 1.21e-38 | 108 |
| musculoskeletal system | 1.33e-27 | 167 |
| lateral plate mesoderm | 2.74e-21 | 203 |
Showing 1 to 10 of 14 entries
