FFCP PHASE2:Hg19::chr18:67956289..67956296,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9306 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16833 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16833 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O14544 | ||
|association_with_transcript=121bp_to_ENST00000397942_5end | |association_with_transcript=121bp_to_ENST00000397942_5end | ||
|cluster_id=chr18:67956289..67956296,+ | |cluster_id=chr18:67956289..67956296,+ | ||
Latest revision as of 07:10, 20 September 2015
| Short description: | p3@SOCS6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_SOCS6_5end |
| Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
| Association with transcript: | 121bp_to_ENST00000397942_5end |
| EntrezGene: | SOCS6 |
| HGNC: | 16833 |
| UniProt: | O14544 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@SOCS6 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid lineage restricted progenitor cell | 5.90e-18 | 66 |
| granulocyte monocyte progenitor cell | 1.36e-17 | 67 |
| myeloid leukocyte | 6.12e-16 | 72 |
| classical monocyte | 4.08e-15 | 42 |
| CD14-positive, CD16-negative classical monocyte | 4.08e-15 | 42 |
| mast cell | 1.83e-14 | 5 |
| basophil mast progenitor cell | 1.83e-14 | 5 |
| defensive cell | 2.00e-14 | 48 |
| phagocyte | 2.00e-14 | 48 |
| monopoietic cell | 4.38e-12 | 59 |
Showing 1 to 10 of 18 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 2.46e-16 | 76 |
| hematopoietic system | 9.48e-15 | 98 |
| blood island | 9.48e-15 | 98 |
| bone element | 1.15e-14 | 82 |
| skeletal element | 4.57e-14 | 90 |
| hemolymphoid system | 1.02e-12 | 108 |
| immune system | 3.56e-12 | 93 |
| skeletal system | 5.36e-12 | 100 |
| lateral plate mesoderm | 2.78e-08 | 203 |
Showing 1 to 9 of 9 entries
