FFCP PHASE2:Hg19::chr1:21794935..21794964,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:84224 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:2507...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=84224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=25076 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9H094 | ||
|association_with_transcript=-78bp_to_AY894564_5end | |association_with_transcript=-78bp_to_AY894564_5end | ||
|cluster_id=chr1:21794935..21794964,+ | |cluster_id=chr1:21794935..21794964,+ | ||
Latest revision as of 04:21, 25 September 2015
| Short description: | p6@NBPF3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_NBPF3_5end |
| Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
| Association with transcript: | -78bp_to_AY894564_5end |
| EntrezGene: | NBPF3 |
| HGNC: | 25076 |
| UniProt: | Q9H094 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@NBPF3 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| testis | 6.50e-34 | 8 |
| male reproductive organ | 4.86e-25 | 11 |
| gonad | 1.02e-13 | 21 |
| indifferent external genitalia | 1.02e-13 | 21 |
| indifferent gonad | 1.02e-13 | 21 |
| gonad primordium | 1.02e-13 | 21 |
| external genitalia | 3.77e-13 | 22 |
| male organism | 3.77e-13 | 22 |
| male reproductive system | 3.77e-13 | 22 |
| body cavity | 7.30e-07 | 46 |
Showing 1 to 10 of 10 entries
