Template:UBERON: Difference between revisions
From FANTOM5_SSTAR
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<html> | <html> | ||
<style type="text/css" title="currentStyle"> | <style type="text/css" title="currentStyle"> | ||
@import "/ | @import "/5/sstar/rb_js/html5button/datatables.css"; | ||
@import "/resource_browser/rb_js/datatables/extras/TableTools/media/css/TableTools.css"; | @import "/resource_browser/rb_js/datatables/extras/TableTools/media/css/TableTools.css"; | ||
table.details td { width:30%; background-color: #EAEBFF;} | table.details td { width:30%; background-color: #EAEBFF;} | ||
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<html> | <html> | ||
<script type="text/javascript" language="javascript" src="/resource_browser/rb_js/datatables/media/js/jquery.dataTables.js"></script> | <script type="text/javascript" language="javascript" src="/resource_browser/rb_js/datatables/media/js/jquery.dataTables.js"></script> | ||
<script type="text/javascript" src="/ | <script type="text/javascript" src="/5/sstar/rb_js/html5button/datatables.min.js"></script> | ||
<script type="text/javascript" src="/resource_browser/rb_js/datatables/extras/TableTools/media/js/TableTools.js"></script> | <script type="text/javascript" src="/resource_browser/rb_js/datatables/extras/TableTools/media/js/TableTools.js"></script> | ||
<script type="text/javascript" language="javascript" > | <script type="text/javascript" language="javascript" > | ||
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if( $('.ont_enrich_ffcp').length ) { | if( $('.ont_enrich_ffcp').length ) { | ||
var oTable= $('.ont_enrich_ffcp'). | var oTable= $('.ont_enrich_ffcp').DataTable({ | ||
dom: 'Blfrti', | |||
" | scrollY: "300px", | ||
scrollCollapse: true, | |||
order: [[0,'asc']], | |||
buttons: ['copyHtml5', 'excelHtml5', 'csvHtml5', 'pdfHtml5'], | |||
columnDefs: [{ width: "100px", targets: [0], type: "html-num"}], | |||
var title = | columns: [null, | ||
return "<a href=\"/resource_browser/index.php/"+title+"\">"+title+"</a>"; | { render: function ( data, type, row, meta ) { | ||
}, | var title = data.split("#")[0]; | ||
return "<a href=\"/resource_browser/index.php/"+title+"\">"+title+"</a>"; | |||
}, | |||
}, | |||
null | |||
] | |||
}); | |||
} | } | ||
else | else | ||
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---- | ---- | ||
{{#ifexpr: 0 = {{#ask:[[ffcp_ontology_enrichment_uberon_id::{{{id}}}]]|?#|format=count}} | No analysis results |{{#ask:[[ffcp_ontology_enrichment_uberon_id::{{{id}}}]] | {{#ifexpr: 0 = {{#ask:[[ffcp_ontology_enrichment_uberon_id::{{{id}}}]]|?#|format=count}} | No analysis results |{{#ask:[[ffcp_ontology_enrichment_uberon_id::{{{id}}}]] | ||
|?ffcp_ontology_enrichment_uberon_p-value|format=template|template=Triplecolumn_to_tbrow|link=none|intro=<html><span id="export_tool"></span><table class="ont_enrich_ffcp"><thead><tr><th>P-value</th><th>FFCP</th><th>Short description</th></tr></thead><tbody></html>|outro=<html></tbody></table></html>|sort=ffcp_ontology_enrichment_uberon_p-value|order=asc|limit=100|searchlabel=}} }} | |?ffcp_ontology_enrichment_uberon_p-value|format=template|template=Triplecolumn_to_tbrow|link=none|intro=<html><span id="export_tool"></span><table class="ont_enrich_ffcp stripe cell-border order-column compact"><thead><tr><th>P-value</th><th>FFCP</th><th>Short description</th></tr></thead><tbody></html>|outro=<html></tbody></table></html>|sort=ffcp_ontology_enrichment_uberon_p-value|order=asc|limit=100|searchlabel=}} }} | ||
{{#arraymap:{{{namespace}}}|;;|$|{{#set:namespace=$}}}} | {{#arraymap:{{{namespace}}}|;;|$|{{#set:namespace=$}}}} |
Revision as of 17:02, 15 February 2018
Name: | {{{name}}} | ||
---|---|---|---|
Namespace: | {{{namespace}}} | ||
Definition: | {{{def}}} | ||
Xrefs: |
| ||
Synonyms: | {{{synonym}}} | ||
Comments: | {{{comment}}} | ||
Alt_id: | {{{alt_id}}} | ||
Subset: | {{{subset}}} | ||
Created by: | {{{created_by}}} | ||
Creation date: | {{{obo_creation_date}}} | ||
Has quality: | {{{has_quality}}} |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
NA
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with {{{id}}} ({{{name}}}), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
"{{{obo_creation_date}}}" contains an extrinsic dash or other characters that are invalid for a date interpretation.
Property "Property value" (as page type) with input value "{{{property_value}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.