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FFCP PHASE1:Mm9::chr10:127896024..127896045,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:127896024..127896045,+
|short_description=p3@Smarcc2
|description=CAGE_peak_3_at_Smarcc2_5end
|association_with_transcript=-246bp_to_ENSMUST00000026433,ENSMUST00000099131,ENSMUST00000105235,NM_001114096,NM_001114097,NM_198160,uc007hmw.2,uc007hmx.2,uc007hmy.2_5end
|EntrezGene=68094
|EntrezGene=68094
|HGNC=
|HGNC=
|UniProt=Q6PDG5,Q3UID0
|UniProt=Q6PDG5,Q3UID0
|association_with_transcript=-246bp_to_ENSMUST00000026433,ENSMUST00000099131,ENSMUST00000105235,NM_001114096,NM_001114097,NM_198160,uc007hmw.2,uc007hmx.2,uc007hmy.2_5end
|description=CAGE_peak_3_at_Smarcc2_5end
|id=chr10:127896024..127896045,+
|ontology_enrichment_disease=
|phase1_expression=1.60148847104794,0,0,1.51232105653415,0.500895729946347,0.33575854382378,0.700837921786577,1.67860320474049,0.985521055061667,1.63845168425395,0,0.0797721589953364,0.513602189793617,0.874204024189974,0.333109761815663,0.607425802169478,0,0.630924330716475,0.685572168028694,1.69755860719212,3.14660173558958,0.496454756004426,0.783599367416806,0.47997726838022,0.22940928106717,0,0,0.430942465371778,0.570070258369122,0,0.443461021310609,0,0,0,1.73310971850765,0.831173226792462,0.816677425049476,0.837063261473815,0,1.57057123192139,1.17646297606203,1.36609096991689,0,1.00717454380462,0.506884656097573,1.65192076945513,3.9119567217402,0.65407546914134,1.5378032791413,1.55543919259427,0.699932108126813,1.43752564364972,2.85230430298152,2.90144856804538,3.02484419228218,0,0.85960031981627,1.03134418455488,4.65327859977075,2.11596391708813,3.80298842103708,0,2.66788438833342,2.6996991518442,0.988866362566974,2.1314403448383,1.19840044207362,1.53687322128622,2.48855069540346,1.62007125998029,2.73422449756797,2.28520787523043,1.98781686856452,3.1847607795888,2.20444583341944,0.919218786610021,0,1.78762273319263,1.84327839907492,4.3522474950964,3.38504281328916,2.08365348222704,1.3959149950069,1.68828783009504,2.75036845998258,2.06240009831567,2.27794689278565,2.60959224155421,0.227178579999552,0.68014404096107,3.47837386442013,0.860423876981386,2.719885334831,2.69851595818909,1.29955283489534,1.79210754838934,0.702222100658759,0.340860645156116,1.03914401841148,0.35333957451034,1.26759077799012,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0,1.37020655662872,1.8125651855302,0.890652834388949,1.56136794089522,1.21786191324856,1.38369298353635,0.753613202763113,1.05829836422134,0.753999547978053,0.741584903203122,2.74738778147832,1.76922110389975,0.808834249737046,1.32504911076236,0.969750506270444,1.86391761218122,4.09893115816166,1.67557365450764,1.27728527604296,1.07833612055328,1.19980546198682,0.508280908292259,2.39665023047716,2.74500361691176,4.90051973240171,3.82413504423008,4.85859368927628,2.70124457927428,2.75810147215188,2.03678727700633,1.11966273549084,1.26361379216837,2.73574412652416,1.04096354370163,1.14951052216736,1.62055916824814,1.9591626318643,2.17716797284249,2.17793324484245,1.78033276663485,3.62184719034622,0.646703978798527,2.45837904218165,2.81521798662318,0.876782929710299,2.78047249225598,1.0447564995665,2.67516777330327,0.995171334092466,1.40442637462647,0.51469581422943,0.284163499395593,0.621377317606506,0.703578179943289,1.08037236876609,0.946978942340841,1.96764231747404,1.07986979021165,0.465067889500816,0.536546802799238,1.05088808130453,0.658239399653922,1.31333971263276,1.70244500046297,1.90059983652932,1.75640092232841,0.939444931322602,2.73376933133365,2.98423375899925,0.660837565967596,0,2.34617075588757,0.928946687441754,1.41754207454303,1.00841762311671,1.33426826306922,1.33157938278791,1.42358718463353,1.31759163779209,2.5133520880027,2.78539060857611,1.9496408711912,0,0.648414149624083,0.995706366271836,0.569003702859245,1.02823661348756,0,1.4255592949172,1.93952487167626,1.75339549725796,2.15004226222475,1.62371162777562,2.04098346193787,2.09775178667061,2.66807364378434,0.667380422864376,1.17935397067922,1.34917267430912,1.21716072833102,1.4470629585145,0.50925170356284,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,1.11642284300551,1.87222603868736,1.76805214562978,1.4351793081753,0.964887042726734,0.554259570499814,0.189491411770485,1.95557971730431,0.169745085775188,1.40814148973101,1.67506257441816,0.714130922658041,0.975668239288994,1.89162172927429,1.55025282754142,0.637819074629948,0.983179888294428,0.690739927463582,1.88043776155965,0,2.17562273527484,1.47529281905711,1.65562047782839,2.0871576698413,1.64096361229084,0.491804836130026,0.504941854408746,1.26203287766503,0.390438744296638,1.50796378412959,1.19484398976276,1.78238939265915,0.849229592366497,0.404810701674894,0.876767573733936,0.790575555893047,4.4984984299053,1.56134093729095,1.95872164033981,1.79175655288934,2.96946221350564,1.32745138339963,0.728341908464944,0,0.565815239267694,1.77181135728464,0.922305443831782,1.29214146584111,0.363533729477506,1.42598951353889,0.632073515871632,1.05418608574999,0,1.70219802876894,1.98067203434441,4.2688365648309,2.35770738534752,1.95074257006501,2.14042581122485,2.13913726782757,0.608929898229199,0.23467170806371,0.21183207086382,0.220528398054962,2.4732937941222,0.968786560175433,2.0506394475573,2.02932984805332,2.29797259643086,0.874442509889552,2.96680483216816,1.53783792718067,2.06386867963222,1.66675074632741,1.13021074202815,1.23024804948923,1.37266903923914,1.18984900995699,0.839708713941948,0.690999869022119,0.954670618015114,2.05618395827738,1.62655573701479,1.08005340821801,1.04544148007234,1.9652630737156,1.21377911746339,0.826534557253359,0,0.388844919875379,0.621339313086926,18.0381740378941,2.0932316446157,1.32366792365678,2.33341426012857,1.16243841129958,2.19642963138012,1.64300134104056,2.47388331203505,5.13810787685983,8.93861247056222,8.06484017522023,1.58005560314089,1.41907650703115,1.33524244314275,1.03936658382236,1.61124026100733,2.38417625737518,1.56254084375959,2.06765338044408,0.908698049533329,1.905170166375,1.10908803650525,2.14407337627455,1.34696578296461,1.16876902181569,0.226730383615211,0,0,0,1.73870634628971,0.187682475451182,2.01466786693992,0,1.00314420807073,3.3885110557024,2.30162618253588,1.71868654031819,3.43706364687375,2.74033007908257,1.5107877947794,0.675022500231806,4.5032120322422,3.62513927187364,3.10656187051092,1.03787347584177,3.59122386060928,2.21953687480374,0.972426868273176,1.25767897576789,2.20612210140017,1.33348036680969,2.26638562962784,2.88827288632634,2.27427490587418,0.760437899670719,2.07488975524684,1.591905626988,1.02440243847791,1.14870937911227,2.38146845641537,1.27472758539341,1.15745532278223,2.47251540481984,2.06078488188156,1.02860775715625,0.532427418478012,0.476872379894642,1.59881058295561,1.2234219453993,1.69229215783353,1.82927972872773,1.31534855718921,0.679020569229309,2.24456908663095,1.66089025373844,1.37906275325789,3.27384834535751,1.39443157067369,1.54325288784913,2.49810577937946,1.16965804222704,1.28922632428979,1.3390183244819,1.10295709559758,0.927471342481686
|phase1_expression=1.60148847104794,0,0,1.51232105653415,0.500895729946347,0.33575854382378,0.700837921786577,1.67860320474049,0.985521055061667,1.63845168425395,0,0.0797721589953364,0.513602189793617,0.874204024189974,0.333109761815663,0.607425802169478,0,0.630924330716475,0.685572168028694,1.69755860719212,3.14660173558958,0.496454756004426,0.783599367416806,0.47997726838022,0.22940928106717,0,0,0.430942465371778,0.570070258369122,0,0.443461021310609,0,0,0,1.73310971850765,0.831173226792462,0.816677425049476,0.837063261473815,0,1.57057123192139,1.17646297606203,1.36609096991689,0,1.00717454380462,0.506884656097573,1.65192076945513,3.9119567217402,0.65407546914134,1.5378032791413,1.55543919259427,0.699932108126813,1.43752564364972,2.85230430298152,2.90144856804538,3.02484419228218,0,0.85960031981627,1.03134418455488,4.65327859977075,2.11596391708813,3.80298842103708,0,2.66788438833342,2.6996991518442,0.988866362566974,2.1314403448383,1.19840044207362,1.53687322128622,2.48855069540346,1.62007125998029,2.73422449756797,2.28520787523043,1.98781686856452,3.1847607795888,2.20444583341944,0.919218786610021,0,1.78762273319263,1.84327839907492,4.3522474950964,3.38504281328916,2.08365348222704,1.3959149950069,1.68828783009504,2.75036845998258,2.06240009831567,2.27794689278565,2.60959224155421,0.227178579999552,0.68014404096107,3.47837386442013,0.860423876981386,2.719885334831,2.69851595818909,1.29955283489534,1.79210754838934,0.702222100658759,0.340860645156116,1.03914401841148,0.35333957451034,1.26759077799012,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0,1.37020655662872,1.8125651855302,0.890652834388949,1.56136794089522,1.21786191324856,1.38369298353635,0.753613202763113,1.05829836422134,0.753999547978053,0.741584903203122,2.74738778147832,1.76922110389975,0.808834249737046,1.32504911076236,0.969750506270444,1.86391761218122,4.09893115816166,1.67557365450764,1.27728527604296,1.07833612055328,1.19980546198682,0.508280908292259,2.39665023047716,2.74500361691176,4.90051973240171,3.82413504423008,4.85859368927628,2.70124457927428,2.75810147215188,2.03678727700633,1.11966273549084,1.26361379216837,2.73574412652416,1.04096354370163,1.14951052216736,1.62055916824814,1.9591626318643,2.17716797284249,2.17793324484245,1.78033276663485,3.62184719034622,0.646703978798527,2.45837904218165,2.81521798662318,0.876782929710299,2.78047249225598,1.0447564995665,2.67516777330327,0.995171334092466,1.40442637462647,0.51469581422943,0.284163499395593,0.621377317606506,0.703578179943289,1.08037236876609,0.946978942340841,1.96764231747404,1.07986979021165,0.465067889500816,0.536546802799238,1.05088808130453,0.658239399653922,1.31333971263276,1.70244500046297,1.90059983652932,1.75640092232841,0.939444931322602,2.73376933133365,2.98423375899925,0.660837565967596,0,2.34617075588757,0.928946687441754,1.41754207454303,1.00841762311671,1.33426826306922,1.33157938278791,1.42358718463353,1.31759163779209,2.5133520880027,2.78539060857611,1.9496408711912,0,0.648414149624083,0.995706366271836,0.569003702859245,1.02823661348756,0,1.4255592949172,1.93952487167626,1.75339549725796,2.15004226222475,1.62371162777562,2.04098346193787,2.09775178667061,2.66807364378434,0.667380422864376,1.17935397067922,1.34917267430912,1.21716072833102,1.4470629585145,0.50925170356284,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,1.11642284300551,1.87222603868736,1.76805214562978,1.4351793081753,0.964887042726734,0.554259570499814,0.189491411770485,1.95557971730431,0.169745085775188,1.40814148973101,1.67506257441816,0.714130922658041,0.975668239288994,1.89162172927429,1.55025282754142,0.637819074629948,0.983179888294428,0.690739927463582,1.88043776155965,0,2.17562273527484,1.47529281905711,1.65562047782839,2.0871576698413,1.64096361229084,0.491804836130026,0.504941854408746,1.26203287766503,0.390438744296638,1.50796378412959,1.19484398976276,1.78238939265915,0.849229592366497,0.404810701674894,0.876767573733936,0.790575555893047,4.4984984299053,1.56134093729095,1.95872164033981,1.79175655288934,2.96946221350564,1.32745138339963,0.728341908464944,0,0.565815239267694,1.77181135728464,0.922305443831782,1.29214146584111,0.363533729477506,1.42598951353889,0.632073515871632,1.05418608574999,0,1.70219802876894,1.98067203434441,4.2688365648309,2.35770738534752,1.95074257006501,2.14042581122485,2.13913726782757,0.608929898229199,0.23467170806371,0.21183207086382,0.220528398054962,2.4732937941222,0.968786560175433,2.0506394475573,2.02932984805332,2.29797259643086,0.874442509889552,2.96680483216816,1.53783792718067,2.06386867963222,1.66675074632741,1.13021074202815,1.23024804948923,1.37266903923914,1.18984900995699,0.839708713941948,0.690999869022119,0.954670618015114,2.05618395827738,1.62655573701479,1.08005340821801,1.04544148007234,1.9652630737156,1.21377911746339,0.826534557253359,0,0.388844919875379,0.621339313086926,18.0381740378941,2.0932316446157,1.32366792365678,2.33341426012857,1.16243841129958,2.19642963138012,1.64300134104056,2.47388331203505,5.13810787685983,8.93861247056222,8.06484017522023,1.58005560314089,1.41907650703115,1.33524244314275,1.03936658382236,1.61124026100733,2.38417625737518,1.56254084375959,2.06765338044408,0.908698049533329,1.905170166375,1.10908803650525,2.14407337627455,1.34696578296461,1.16876902181569,0.226730383615211,0,0,0,1.73870634628971,0.187682475451182,2.01466786693992,0,1.00314420807073,3.3885110557024,2.30162618253588,1.71868654031819,3.43706364687375,2.74033007908257,1.5107877947794,0.675022500231806,4.5032120322422,3.62513927187364,3.10656187051092,1.03787347584177,3.59122386060928,2.21953687480374,0.972426868273176,1.25767897576789,2.20612210140017,1.33348036680969,2.26638562962784,2.88827288632634,2.27427490587418,0.760437899670719,2.07488975524684,1.591905626988,1.02440243847791,1.14870937911227,2.38146845641537,1.27472758539341,1.15745532278223,2.47251540481984,2.06078488188156,1.02860775715625,0.532427418478012,0.476872379894642,1.59881058295561,1.2234219453993,1.69229215783353,1.82927972872773,1.31534855718921,0.679020569229309,2.24456908663095,1.66089025373844,1.37906275325789,3.27384834535751,1.39443157067369,1.54325288784913,2.49810577937946,1.16965804222704,1.28922632428979,1.3390183244819,1.10295709559758,0.927471342481686
|short_description=p3@Smarcc2
}}
}}

Revision as of 14:51, 17 April 2012

Short description:p3@Smarcc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Smarcc2_5end
Coexpression cluster:NA
Association with transcript: -246bp_to_ENSMUST00000026433, ENSMUST00000099131, ENSMUST00000105235, NM_001114096, NM_001114097, NM_198160, uc007hmw.2, uc007hmx.2, uc007hmy.2_5end
EntrezGene:Smarcc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Smarcc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H32.05
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G518.04
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D95.14
testis, neonate N20.CNhs11110.839-18H38.94
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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