Personal tools

FFCP PHASE1:Mm9::chr13:23627280..23627296,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:23627280..23627296,+
|short_description=p3@Hist1h3a,p3@Hist1h3g,p3@Hist1h3h,p3@Hist1h3i
|description=CAGE_peak_3_at_Hist1h3a_5end,CAGE_peak_3_at_Hist1h3g_5end,CAGE_peak_3_at_Hist1h3h_5end,CAGE_peak_3_at_Hist1h3i_5end
|association_with_transcript=0bp_to_ENSMUST00000080859,NM_145073,uc007ptx.1_5end
|EntrezGene=319152,319153,360198,97908
|EntrezGene=319152,319153,360198,97908
|HGNC=
|HGNC=
|UniProt=P68433,A1L0V4
|UniProt=P68433,A1L0V4
|association_with_transcript=0bp_to_ENSMUST00000080859,NM_145073,uc007ptx.1_5end
|description=CAGE_peak_3_at_Hist1h3a_5end,CAGE_peak_3_at_Hist1h3g_5end,CAGE_peak_3_at_Hist1h3h_5end,CAGE_peak_3_at_Hist1h3i_5end
|id=chr13:23627280..23627296,+
|ontology_enrichment_disease=
|phase1_expression=133.403989638293,62.1176225598063,38.219936108721,15.1232105653415,52.0931559144201,350.196161208202,293.183863947385,9.42600261123507,0.985521055061667,3.04283884218592,0.171217968225505,0.239316476986009,1.19840510951844,1.31130603628496,1670.54545550555,2103.71802818029,2717.09833464972,143.062091989961,124.637020147617,450.27742055771,47.9644156452034,707.646609208709,810.241745908978,306.385489649374,399.63096761901,197.535795655567,255.011101726172,238.526654583279,315.248852878124,430.719491759722,775.391595761601,10540.239118083,10681.2151011936,11188.80667969,744.370624099035,1119.25786719873,885.07415939737,1495.41351662297,3107.37066517115,1945.41423260663,793.524277353838,1586.03161607351,1204.06567551726,41.4200531139649,27.980033016586,40.7473789798933,261.318709012245,700.732852606755,53.8231147699456,42.3857179981938,263.034486234056,339.256051901333,31.207564726739,17.4086914082723,16.8046899571232,114.994967908068,60.1720223871389,10.3134418455488,137.575193384527,111.088105647127,188.881758244841,245.662285750121,442.868808463347,69.7422280893084,82.0759080930589,72.4689717245022,333.454923006984,315.827446974318,388.421287707557,388.142072703611,553.364973315486,86.5522482743525,116.3977210815,682.273751627294,604.784922125071,460.528612091621,4.40463523997555,2.17068474744819,1.22885226604995,80.1868629399579,50.5926669121325,83.3461392890816,3.07101298901519,4.50210088025344,1.22238598221448,142.894863954729,63.0706545940026,60.3934204473974,18.931548333296,168.826865278559,2.89864488701678,14.6272059086836,2.719885334831,1.61910957491345,1.94932925234301,0.448026887097336,162.072860832042,381.593492252271,713.891940648683,571.70343155773,130.843536972536,74.4293569003043,12.7402619853323,21.3320010945999,1180.95862871617,815.818766829817,834.620858719407,92.2605748130005,107.977097480871,9.94562331734326,844.526570697549,577.26654687982,362.296946189268,203.47556474604,93.7181995871567,55.9216331417056,1.73036477414062,13.158541479712,871.341393670626,254.13572126738,594.063684658459,721.494376665211,190.119596442485,0.292780797011547,0.628340120440365,185.461822081437,1099.54339759083,1742.71743353585,1048.83765426108,1.19832511523858,8.6925114535539,89.5915530564723,2.9550134432687,4.09144731728529,2.0778804455956,5.51620294430376,309.591666104962,474.488185906895,10.6143558542143,5.26104639716185,964.062361910672,1370.9062487368,701.522057721641,580.66566312101,432.98428059905,568.440576903879,499.711297077034,15.78090561508,1329.40781241684,720.305059359224,520.111523028633,684.986663836171,546.3628447283,255.965342393792,288.506555243937,548.737473618586,1995.68987834421,1332.54746304,777.187170846946,453.812567625285,634.627518308846,508.855385688828,356.537571791327,448.622448384081,436.884463697055,321.129377700313,240.641241055458,185.073067651964,174.762560608116,90.4562727075815,22.7803354823855,14.9123987173839,39.9581209829712,26.8412837520744,3.36463917702604,82.4265945158068,13.8775888853195,331.621010596085,981.765817213682,743.389586625264,514.438905597797,331.164347431528,303.323651804403,308.355739928458,200.725793033328,160.581480855911,207.100212051422,194.181516712163,146.22306533934,142.912285976021,194.091968787475,119.285622679366,1245.73877345984,911.817379138246,483.516186037515,562.077664853067,441.823765767851,188.244540585615,124.575978134787,16.3847264257358,36.1097074035162,22.0880923420023,5.33614728756868,1565.17393672268,1732.47098292777,1692.31225780841,1907.69658153748,1650.61648134554,1848.32905808133,1005.49800039058,360.264473894129,860.475468931447,195.524760877202,205.793944060682,149.466045421875,78.5520310415518,88.9811171068684,15.4381926836277,67.0654080304775,1467.80047557417,679.563951763248,988.425634468921,881.261882323325,334.007477338981,189.244694504381,38.0510613322708,182.068591442651,191.124027166893,65.2170003809122,26.2181303545181,46.1068901581941,45.4198043945946,21.1107797514981,34.2660580805787,121.465775435702,58.2226534702986,0.481651769963376,1.52375192569864,517.706557499541,36.6082844446341,490.615281192279,447.442800963948,270.14094075693,226.064482863114,178.461737939998,178.055137866176,255.030742055183,158.402674987931,142.698887838695,1.60660658210904,74.2346645639245,477.393883431911,255.406752266407,48.666186276898,3.98235415019888,1473.67846146074,969.249323628992,478.491087340713,302.389138309911,186.30569965402,118.877014857382,286.464578828274,285.910897464547,95.4431008966164,47.4383738587494,59.8186150839484,4.42571487479924,848.627936169565,841.995672741949,493.403854642725,228.059540463964,257.207834982186,191.041412919062,291.677421251786,196.889563065453,8.26145076368899,6.3953235435939,121.521168417871,162.594677682777,288.054529456872,401.449192882548,277.398120569154,122.421951384537,3.70850604021019,1406.95083248952,642.275933101548,903.934488091563,2211.63405369208,1448.82211961515,1492.54880199935,223.181678581932,274.864652363664,281.927946561025,6.68269432610579,824.84610326281,489.186637907198,499.956722664118,391.204201843071,337.151798424098,314.773384462172,140.34556782162,90.0440440425062,108.358117671939,25.474911836564,15.2197093444731,443.765108658529,694.098367467525,315.010925117357,550.737487309045,393.836728519004,346.790640198203,207.545789441256,93.6393945721598,30.9227674657288,12.6733202753461,1408.77757576042,1238.04288977703,1041.89994948001,1486.68397733491,1423.44125725214,1236.39407080381,1719.63629628219,1498.16256365891,1402.12109042993,1357.16701971889,1467.32347229644,1375.61798664161,1041.58939759821,624.707042160486,38.0907044473555,388.253432451239,621.537598590448,306.557309480807,7.14801497919105,66.0642313588161,41.3922670844019,105.254874127821,7.02200945649509,14.6835479080437,10.1271552031579,10.8850147553485,10.1393377582776,6.16574267793578,5.2877572817279,5.40018000185445,4.95353323546643,3.62513927187364,1.55328093525546,1755.8743464291,553.846524280631,942.108036551312,694.312783947048,1266.6923417609,527.447025743091,340.926480447678,340.575949615892,324.449320897325,287.064032563674,320.144355761373,272.753689644266,277.085220603382,252.002999865565,227.042408781539,242.433488863085,212.8795067607,213.164688612394,230.768104449852,247.294185825788,435.101081277092,328.152765588615,241.774296606583,285.024323015996,255.130530305961,250.459239359362,273.477319444795,290.165891715941,246.077054288702,425.906984188223,240.710451773949,228.431894628932,243.083239642795,231.165767049461,382.340902964622,380.71132077743,254.75152159705,202.408532913497,98.896067679592,374.123046826698,302.81939332027
|phase1_expression=133.403989638293,62.1176225598063,38.219936108721,15.1232105653415,52.0931559144201,350.196161208202,293.183863947385,9.42600261123507,0.985521055061667,3.04283884218592,0.171217968225505,0.239316476986009,1.19840510951844,1.31130603628496,1670.54545550555,2103.71802818029,2717.09833464972,143.062091989961,124.637020147617,450.27742055771,47.9644156452034,707.646609208709,810.241745908978,306.385489649374,399.63096761901,197.535795655567,255.011101726172,238.526654583279,315.248852878124,430.719491759722,775.391595761601,10540.239118083,10681.2151011936,11188.80667969,744.370624099035,1119.25786719873,885.07415939737,1495.41351662297,3107.37066517115,1945.41423260663,793.524277353838,1586.03161607351,1204.06567551726,41.4200531139649,27.980033016586,40.7473789798933,261.318709012245,700.732852606755,53.8231147699456,42.3857179981938,263.034486234056,339.256051901333,31.207564726739,17.4086914082723,16.8046899571232,114.994967908068,60.1720223871389,10.3134418455488,137.575193384527,111.088105647127,188.881758244841,245.662285750121,442.868808463347,69.7422280893084,82.0759080930589,72.4689717245022,333.454923006984,315.827446974318,388.421287707557,388.142072703611,553.364973315486,86.5522482743525,116.3977210815,682.273751627294,604.784922125071,460.528612091621,4.40463523997555,2.17068474744819,1.22885226604995,80.1868629399579,50.5926669121325,83.3461392890816,3.07101298901519,4.50210088025344,1.22238598221448,142.894863954729,63.0706545940026,60.3934204473974,18.931548333296,168.826865278559,2.89864488701678,14.6272059086836,2.719885334831,1.61910957491345,1.94932925234301,0.448026887097336,162.072860832042,381.593492252271,713.891940648683,571.70343155773,130.843536972536,74.4293569003043,12.7402619853323,21.3320010945999,1180.95862871617,815.818766829817,834.620858719407,92.2605748130005,107.977097480871,9.94562331734326,844.526570697549,577.26654687982,362.296946189268,203.47556474604,93.7181995871567,55.9216331417056,1.73036477414062,13.158541479712,871.341393670626,254.13572126738,594.063684658459,721.494376665211,190.119596442485,0.292780797011547,0.628340120440365,185.461822081437,1099.54339759083,1742.71743353585,1048.83765426108,1.19832511523858,8.6925114535539,89.5915530564723,2.9550134432687,4.09144731728529,2.0778804455956,5.51620294430376,309.591666104962,474.488185906895,10.6143558542143,5.26104639716185,964.062361910672,1370.9062487368,701.522057721641,580.66566312101,432.98428059905,568.440576903879,499.711297077034,15.78090561508,1329.40781241684,720.305059359224,520.111523028633,684.986663836171,546.3628447283,255.965342393792,288.506555243937,548.737473618586,1995.68987834421,1332.54746304,777.187170846946,453.812567625285,634.627518308846,508.855385688828,356.537571791327,448.622448384081,436.884463697055,321.129377700313,240.641241055458,185.073067651964,174.762560608116,90.4562727075815,22.7803354823855,14.9123987173839,39.9581209829712,26.8412837520744,3.36463917702604,82.4265945158068,13.8775888853195,331.621010596085,981.765817213682,743.389586625264,514.438905597797,331.164347431528,303.323651804403,308.355739928458,200.725793033328,160.581480855911,207.100212051422,194.181516712163,146.22306533934,142.912285976021,194.091968787475,119.285622679366,1245.73877345984,911.817379138246,483.516186037515,562.077664853067,441.823765767851,188.244540585615,124.575978134787,16.3847264257358,36.1097074035162,22.0880923420023,5.33614728756868,1565.17393672268,1732.47098292777,1692.31225780841,1907.69658153748,1650.61648134554,1848.32905808133,1005.49800039058,360.264473894129,860.475468931447,195.524760877202,205.793944060682,149.466045421875,78.5520310415518,88.9811171068684,15.4381926836277,67.0654080304775,1467.80047557417,679.563951763248,988.425634468921,881.261882323325,334.007477338981,189.244694504381,38.0510613322708,182.068591442651,191.124027166893,65.2170003809122,26.2181303545181,46.1068901581941,45.4198043945946,21.1107797514981,34.2660580805787,121.465775435702,58.2226534702986,0.481651769963376,1.52375192569864,517.706557499541,36.6082844446341,490.615281192279,447.442800963948,270.14094075693,226.064482863114,178.461737939998,178.055137866176,255.030742055183,158.402674987931,142.698887838695,1.60660658210904,74.2346645639245,477.393883431911,255.406752266407,48.666186276898,3.98235415019888,1473.67846146074,969.249323628992,478.491087340713,302.389138309911,186.30569965402,118.877014857382,286.464578828274,285.910897464547,95.4431008966164,47.4383738587494,59.8186150839484,4.42571487479924,848.627936169565,841.995672741949,493.403854642725,228.059540463964,257.207834982186,191.041412919062,291.677421251786,196.889563065453,8.26145076368899,6.3953235435939,121.521168417871,162.594677682777,288.054529456872,401.449192882548,277.398120569154,122.421951384537,3.70850604021019,1406.95083248952,642.275933101548,903.934488091563,2211.63405369208,1448.82211961515,1492.54880199935,223.181678581932,274.864652363664,281.927946561025,6.68269432610579,824.84610326281,489.186637907198,499.956722664118,391.204201843071,337.151798424098,314.773384462172,140.34556782162,90.0440440425062,108.358117671939,25.474911836564,15.2197093444731,443.765108658529,694.098367467525,315.010925117357,550.737487309045,393.836728519004,346.790640198203,207.545789441256,93.6393945721598,30.9227674657288,12.6733202753461,1408.77757576042,1238.04288977703,1041.89994948001,1486.68397733491,1423.44125725214,1236.39407080381,1719.63629628219,1498.16256365891,1402.12109042993,1357.16701971889,1467.32347229644,1375.61798664161,1041.58939759821,624.707042160486,38.0907044473555,388.253432451239,621.537598590448,306.557309480807,7.14801497919105,66.0642313588161,41.3922670844019,105.254874127821,7.02200945649509,14.6835479080437,10.1271552031579,10.8850147553485,10.1393377582776,6.16574267793578,5.2877572817279,5.40018000185445,4.95353323546643,3.62513927187364,1.55328093525546,1755.8743464291,553.846524280631,942.108036551312,694.312783947048,1266.6923417609,527.447025743091,340.926480447678,340.575949615892,324.449320897325,287.064032563674,320.144355761373,272.753689644266,277.085220603382,252.002999865565,227.042408781539,242.433488863085,212.8795067607,213.164688612394,230.768104449852,247.294185825788,435.101081277092,328.152765588615,241.774296606583,285.024323015996,255.130530305961,250.459239359362,273.477319444795,290.165891715941,246.077054288702,425.906984188223,240.710451773949,228.431894628932,243.083239642795,231.165767049461,382.340902964622,380.71132077743,254.75152159705,202.408532913497,98.896067679592,374.123046826698,302.81939332027
|short_description=p3@Hist1h3a,p3@Hist1h3g,p3@Hist1h3h,p3@Hist1h3i
}}
}}

Revision as of 19:32, 17 April 2012

Short description:p3@Hist1h3a, p3@Hist1h3g, p3@Hist1h3h, p3@Hist1h3i
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Hist1h3a_5end, CAGE_peak_3_at_Hist1h3g_5end, CAGE_peak_3_at_Hist1h3h_5end, CAGE_peak_3_at_Hist1h3i_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000080859, NM_145073, uc007ptx.1_5end
EntrezGene:319152,319153,360198,97908
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Hist1h3ap3@Hist1h3gp3@Hist1h3hp3@Hist1h3i

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7133.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I562.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I638.22
CD326+ enterocyte, pool1.CNhs13542.11848-124I315.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I452.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7350.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8293.18
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11670.55
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32103.72
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52717.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2143.06
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4124.64
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6450.28
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A347.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2707.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9810.24
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1306.39
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2399.63
GP2+ M cell, pool1.CNhs13228.11845-124H9197.54
GP2+ M cell, pool2.CNhs13231.11846-124I1255.01
GP2+ M cell, pool3.CNhs13240.11847-124I2238.53
Ileum epithelium, pool1.CNhs13199.10252-104B9315.25
Ileum epithelium, pool2.CNhs13232.10253-104C1430.72
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8775.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310540.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G610681.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E911188.81
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5744.37
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61119.26
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7885.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81495.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13107.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31945.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9793.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21586.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41204.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D841.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D927.98
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B340.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7261.32
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2700.73
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B853.82
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C342.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C4263.03
Mouse Astrocytes, donor3.CNhs12107.11633-122C4339.26
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A231.21
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I917.41
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A116.80
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1114.99
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E160.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C3137.58
Mouse Granule cells, donor2.CNhs12357.11731-123E3111.09
Mouse Granule cells, donor3.CNhs12108.11636-122C7188.88
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6245.66
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1442.87
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C769.74
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E782.08
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D272.47
Mouse Microglia, donor1.CNhs12629.11718-123C8333.45
Mouse Microglia, donor2.CNhs12634.11736-123E8315.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5388.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5388.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9553.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F186.55
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5116.40
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2682.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2604.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6460.53
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D480.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F450.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D883.35
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6142.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F663.07
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E160.39
Mouse Schwann, donor1.CNhs12507.11728-123D918.93
Mouse Schwann, donor2.CNhs12573.11746-123F9168.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7162.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7381.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3713.89
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8571.70
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6130.84
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H174.43
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11180.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2815.82
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3834.62
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B692.26
accessory axillary lymph node, adult.CNhs10475.1063-29H9107.98
adrenal gland, adult.CNhs10508.49-24D79.95
adrenal gland, embryo E14.CNhs11038.406-44C5844.53
adrenal gland, embryo E16.CNhs11004.1254-43D6577.27
adrenal gland, embryo E17.CNhs11043.1263-45I1362.30
adrenal gland, embryo E18.CNhs11026.1262-18F5203.48
adrenal gland, neonate N00.CNhs11191.1311-23C193.72
adrenal gland, neonate N25.CNhs11223.1377-27I355.92
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H113.16
bone (os femoris), adult.CNhs10483.56-12G2871.34
bone (os femoris), neonate N02.CNhs11227.1985-43F5254.14
bone (os femoris), neonate N16.CNhs11225.1525-43A6594.06
bone (os femoris), neonate N20.CNhs11195.1350-25C3721.49
cecum, adult.CNhs10467.37-13H4190.12
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H7185.46
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71099.54
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11742.72
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41048.84
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F189.59
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1309.59
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2474.49
epididymis, adult.CNhs10490.58-23B210.61
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C6964.06
eyeball, embryo E14.CNhs10521.399-16E21370.91
eyeball, embryo E15.CNhs10593.426-16C9701.52
eyeball, embryo E17.CNhs11023.1261-18D4580.67
eyeball, neonate N00.CNhs11207.633-15C6432.98
eyeball, neonate N01.CNhs11140.1532-43E7568.44
eyeball, neonate N02.CNhs11205.1551-44G8499.71
eyeball, neonate N16.CNhs11188.777-19A215.78
forelimb, embryo E11.CNhs10596.335-25E21329.41
forelimb, embryo E12.CNhs10600.359-14H2720.31
forelimb, embryo E13.CNhs10589.384-1E2520.11
forelimb, embryo E14.CNhs10577.413-26A8684.99
forelimb, embryo E15.CNhs11007.437-20E7546.36
forelimb, embryo E17.CNhs10598.1517-43C4255.97
forelimb, embryo E18.CNhs11008.1520-43B5288.51
gonad, embryo E13.CNhs11044.1564-45I6548.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81995.69
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21332.55
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5777.19
heart, embryo E11.CNhs10586.331-24E9453.81
heart, embryo E12.CNhs11015.353-12F5634.63
heart, embryo E13.CNhs11013.376-3I9508.86
heart, embryo E14.CNhs10597.403-26D4356.54
heart, embryo E15.CNhs11017.431-16C8448.62
heart, embryo E16.CNhs11021.457-17C6436.88
heart, embryo E17.CNhs11025.479-18E5321.13
heart, embryo E18.CNhs11030.1283-20G3240.64
heart, neonate N00.CNhs11213.639-21E3185.07
heart, neonate N03.CNhs11221.1349-25I2174.76
heart, neonate N10.CNhs11118.749-24G190.46
heart, neonate N16.CNhs11209.782-15G122.78
heart, neonate N20.CNhs11127.821-26I614.91
heart, neonate N25.CNhs11196.1351-25D339.96
heart, neonate N30.CNhs11202.1390-42D226.84
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G182.43
intestinal mucosa, adult.CNhs10506.860-29I313.88
intestine, adult.CNhs10496.178-9A3331.62
intestine, embryo E12.CNhs11019.1251-16I5981.77
intestine, embryo E13.CNhs11010.381-16D5743.39
intestine, embryo E15.CNhs10602.976-16D8514.44
intestine, embryo E16.CNhs10585.463-22H4331.16
intestine, embryo E17.CNhs10582.482-18D3303.32
intestine, embryo E18.CNhs10526.1289-20F7308.36
intestine, neonate N00.CNhs11126.644-26D1200.73
intestine, neonate N01.CNhs11192.1322-23E9160.58
intestine, neonate N06.CNhs11102.688-20B8207.10
intestine, neonate N07.CNhs11095.720-20F2194.18
intestine, neonate N10.CNhs11098.755-23A5146.22
intestine, neonate N20.CNhs11187.827-18D1142.91
intestine, neonate N25.CNhs11121.1352-25E3194.09
intestine, neonate N30.CNhs11131.1384-42G1119.29
kidney, embryo E14.CNhs10606.411-4I91245.74
kidney, embryo E15.CNhs10997.434-16F8911.82
kidney, embryo E16.CNhs10584.464-22A5483.52
kidney, embryo E17.CNhs11028.483-18I2562.08
kidney, embryo E18.CNhs11001.1288-20C7441.82
kidney, neonate N00.CNhs11214.646-21G7188.24
kidney, neonate N10.CNhs11206.758-6D5124.58
kidney, neonate N20.CNhs11113.832-19I116.38
kidney, neonate N25.CNhs11122.1353-25F336.11
kidney, neonate N30.CNhs11203.1385-42H122.09
liver, adult pregnant day01.CNhs10466.508-5B25.34
liver, embryo E12.CNhs10601.355-15F81565.17
liver, embryo E13.CNhs10524.378-3H61732.47
liver, embryo E14.CNhs10594.409-16E11692.31
liver, embryo E15.CNhs10520.433-16D71907.70
liver, embryo E16.CNhs10523.462-17F51650.62
liver, embryo E17.CNhs10510.481-18A31848.33
liver, embryo E18.CNhs10579.499-43G41005.50
liver, neonate N00.CNhs11117.641-24F4360.26
liver, neonate N03.CNhs11123.1345-25G2860.48
liver, neonate N06.CNhs11101.684-20A8195.52
liver, neonate N07.CNhs11103.716-20H2205.79
liver, neonate N10.CNhs11115.751-24B9149.47
liver, neonate N20.CNhs11220.823-25A378.55
liver, neonate N25.CNhs11198.1368-26H188.98
liver, neonate N30.CNhs11106.1382-42D115.44
lung, adult.CNhs10474.28-22B167.07
lung, embryo E12.CNhs10522.354-16G21467.80
lung, embryo E14.CNhs10604.404-26F8679.56
lung, embryo E15.CNhs11020.432-17C5988.43
lung, embryo E16.CNhs10998.458-17B6881.26
lung, embryo E17.CNhs10605.480-44A6334.01
lung, embryo E18.CNhs10583.1287-20I6189.24
lung, neonate N00.CNhs11224.640-42C638.05
lung, neonate N06.CNhs11212.683-20E5182.07
lung, neonate N07.CNhs11111.715-19A3191.12
lung, neonate N10.CNhs11219.750-23E665.22
lung, neonate N20.CNhs11109.822-18A426.22
lung, neonate N25.CNhs11119.1359-25C746.11
lung, neonate N30.CNhs11133.1394-42H245.42
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A134.27
mammary gland, adult lactating day02.CNhs10480.595-22B6121.47
mammary gland, adult pregnant day19.CNhs10476.588-5H258.22
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7517.71
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C236.61
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1490.62
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2447.44
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3270.14
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7226.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8178.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9178.06
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4255.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5158.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6142.70
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I774.23
ovary, embryo E18.CNhs11040.505-44H7477.39
ovary, neonate N00.CNhs11217.1299-22I4255.41
oviduct, adult pregnant day01.CNhs10500.988-6G648.67
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41473.68
pancreas, embryo E15.CNhs11042.1556-45F2969.25
pancreas, embryo E16.CNhs11003.460-26E5478.49
pancreas, embryo E17.CNhs10599.1558-45G3302.39
pancreas, embryo E18.CNhs10580.1535-43I7186.31
pancreas, neonate N00.CNhs11105.645-26G9118.88
pancreas, neonate N01.CNhs11138.1531-43D7286.46
pancreas, neonate N02.CNhs11139.1539-43D8285.91
pancreas, neonate N16.CNhs11136.787-43B695.44
pancreas, neonate N25.CNhs11094.1555-45E247.44
pancreas, neonate N30.CNhs11182.1548-44H559.82
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E6848.63
pituitary gland, embryo E13.CNhs11009.370-44C7842.00
pituitary gland, embryo E14.CNhs11037.398-44A5493.40
pituitary gland, embryo E15.CNhs10592.427-16B9228.06
pituitary gland, embryo E16.CNhs11036.449-43F6257.21
pituitary gland, embryo E17.CNhs11039.1265-44F5191.04
pituitary gland, neonate N00.CNhs11190.1308-22E9291.68
placenta, adult pregnant day10.CNhs10472.539-13I7196.89
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F86.40
skin, adult.CNhs10492.30-1C3121.52
skin, neonate N00.CNhs11124.650-25G4162.59
skin, neonate N03.CNhs11215.662-22H3288.05
skin, neonate N06.CNhs11097.693-20I5401.45
skin, neonate N10.CNhs11108.762-6C4277.40
small intestine, neonate N16.CNhs11114.790-21I1122.42
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G21406.95
spleen, embryo E16.CNhs11035.461-43C1642.28
spleen, embryo E18.CNhs11011.1271-21F2903.93
spleen, neonate N10.CNhs11116.752-24D12211.63
spleen, neonate N20.CNhs11112.824-19H11448.82
spleen, neonate N25.CNhs11099.1354-25G31492.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6223.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9274.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3281.93
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E3824.85
stomach, embryo E15.CNhs10603.1252-16G8489.19
stomach, embryo E16.CNhs11022.459-17D4499.96
stomach, embryo E17.CNhs11006.1035-18D5391.20
stomach, embryo E18.CNhs10999.1286-20C6337.15
stomach, neonate N03.CNhs11193.1340-24B8314.77
stomach, neonate N07.CNhs11210.718-18A9140.35
stomach, neonate N25.CNhs11104.1355-25E490.04
stomach, neonate N30.CNhs11134.1386-42I1108.36
submandibular gland, adult.CNhs10469.59-29C125.47
testis, adult.CNhs10504.57-7G515.22
testis, embryo E13.CNhs11031.389-23F5443.77
testis, embryo E15.CNhs11034.443-27C5694.10
testis, embryo E16.CNhs11033.470-26G5315.01
testis, embryo E17.CNhs11029.486-18I5550.74
testis, embryo E18.CNhs11027.503-18G5393.84
testis, neonate N00.CNhs11189.1300-22B7346.79
testis, neonate N07.CNhs11222.726-26I4207.55
testis, neonate N10.CNhs11204.763-44D993.64
testis, neonate N20.CNhs11110.839-18H330.92
testis, neonate N30.CNhs11130.1391-42E212.67
thymus, adult.CNhs10471.38-12B51408.78
thymus, embryo E14.CNhs11041.402-44I41238.04
thymus, embryo E15.CNhs11005.430-45I21041.90
thymus, embryo E16.CNhs11002.456-26C51486.68
thymus, embryo E17.CNhs10581.478-18C11423.44
thymus, embryo E18.CNhs10595.1273-19G41236.39
thymus, neonate N02.CNhs11181.1541-43F81719.64
thymus, neonate N03.CNhs11137.2104-43C71498.16
thymus, neonate N06.CNhs11197.681-26C41402.12
thymus, neonate N07.CNhs11211.713-19D31357.17
thymus, neonate N10.CNhs11194.748-24E41467.32
thymus, neonate N20.CNhs11186.820-7A21375.62
thymus, neonate N25.CNhs11125.1362-25G71041.59
thymus, neonate N30.CNhs11132.1393-42G2624.71
tongue, adult.CNhs10499.32-1B438.09
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3388.25
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7621.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5306.56
urinary bladder, adult.CNhs10481.879-12E47.15
uterus, adult pregnant day19.CNhs10497.590-15F566.06
uterus, adult.CNhs10509.92-27E541.39
vagina, adult.CNhs10502.89-27D5105.25
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81755.87
whole body, embryo E12.CNhs10587.857-27C9553.85
whole body, embryo E13.CNhs10512.372-23H2942.11
whole body, embryo E14.5.CNhs10578.420-27D2694.31
whole body, embryo E14.CNhs10519.395-14B11266.69
whole body, embryo E16.CNhs10514.453-14F2527.45
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5340.93
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5340.58
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5324.45
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5287.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5320.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5272.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5277.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5252.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5227.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5242.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5212.88
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5213.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5230.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5247.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5435.10
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5328.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5241.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5285.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5255.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5250.46
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5273.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5290.17
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5246.08
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5425.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5240.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5228.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5243.08
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5231.17
whole body, embryo E17.5.CNhs10513.490-9F9382.34
whole body, embryo E17.CNhs10517.475-3I5380.71
whole body, embryo E18.CNhs10516.493-3B3254.75
whole body, neonate N00.CNhs10525.657-19C2202.41
whole body, neonate N01.CNhs10576.659-23C698.90
whole body, neonate N06.CNhs10515.692-21D1374.12
whole body, neonate N10.CNhs10518.761-6B4302.82





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:23627280..23627296,%2B&oldid=752761"