Personal tools

FFCP PHASE1:Mm9::chr13:74946058..74946128,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:74946058..74946128,-
|short_description=p2@Cast
|description=CAGE_peak_2_at_Cast_5end
|association_with_transcript=79bp_to_uc007rfq.1_5end
|EntrezGene=12380
|EntrezGene=12380
|HGNC=
|HGNC=
|UniProt=P51125
|UniProt=P51125
|association_with_transcript=79bp_to_uc007rfq.1_5end
|description=CAGE_peak_2_at_Cast_5end
|id=chr13:74946058..74946128,-
|ontology_enrichment_disease=
|phase1_expression=5.60520964866779,33.850614541018,40.9499315450582,18.4503168897166,21.5385163876929,15.4448930158939,14.9512089981136,52.5531926407215,19.006477490475,9.59664557920173,5.65019295144166,1.91453181588807,50.1618138698433,38.7272382716158,10.6595123781012,9.51633756732182,2.09868563438444,20.5050407482854,27.834230021965,16.9755860719212,10.4603246885816,8.53902180327614,4.17919662622297,28.6386436800198,33.4937550358068,32.1569899904411,29.7225777349762,32.7516273682551,32.3039813075836,39.8207605020691,26.164200257326,0,1.23012957516914,0,9.82095507154334,7.31432439577366,8.77928231928187,94.1696169158042,50.786797394047,74.8638953882532,91.7641121328382,73.0858668905537,79.138187544078,26.9419190467735,24.026332699025,15.9685674380663,13.3006528539167,4.36050312760893,5.93152693383074,7.58276606389705,14.6985742706631,4.31257693094915,21.9795213935635,53.6767985088395,47.3892256790874,41.6760286378234,42.9800159908135,29.3933092598142,1.21389876515759,1.05798195854407,0,14.5703148789727,16.0073063300005,4.94944844504769,4.94433181283487,2.8419204597844,1.79760066311043,2.68952813725088,1.14058573539325,0.675029691658453,0.841299845405528,1.42825492201902,1.76694832761291,1.10241719293459,0.766763768145891,0,3.30347642998166,1.53224805702225,2.15049146558741,1.18697658957174,0.914876436024097,0.52091337055676,3.90856198601933,1.12552522006336,2.29197371665215,4.12480019663135,4.55589378557129,2.79599168737951,26.2012628932817,45.9475085449256,30.4357713136762,8.60423876981386,5.439770669662,2.15881276655127,7.79731700937203,7.6164570806547,12.2186645514624,58.1167399991177,39.4874726996361,39.9273719196684,7.46470124816407,35.931413676009,96.8259910885254,71.1066703153331,11.2575341325831,11.6545538118545,15.6712577954583,9.24889425724386,56.1895207514363,13.0629082377046,6.24547176358089,6.39377504455497,9.4552353874984,9.19408107370998,13.1699351991989,15.3313241422204,15.8204779349999,42.8014096482938,10.6153266233985,32.5151368394292,23.1883594383413,25.2135131630315,24.2309289583559,0.585561594023094,0.83778682725382,29.377561348988,12.1013275750979,8.99854096490112,13.4694440697449,3.89455662452539,2.74500361691176,1.13088916901578,2.25971616249959,1.53429274398198,3.1168206683934,1.94689515681309,16.8034950353022,21.0247780331057,6.82351447770922,16.8353484709179,4.81445638962004,3.90833577536904,5.76198815377118,7.9873553452929,8.23241639731067,7.04625461566674,7.77724313845749,12.9351685369508,2.80238390812695,9.26619792822314,8.79755620819744,10.7405908889512,15.0145514581823,23.6811473235073,26.3401134602168,7.56330213910274,8.42655824775882,10.0365683774739,13.924011470384,13.2560494422721,11.7263029990548,11.523971933505,17.5191104333056,20.2667158699826,18.8205877722601,19.0677834695334,23.6080593231665,27.556620798652,24.1902979372816,29.221808606079,30.9682852465169,28.8013975227905,24.1505126820156,28.0491415209177,1.89260953707715,1.9551876352064,47.9107235326507,15.073682299822,5.54549451391608,6.0381534683714,7.98978260196979,7.66397393568702,5.33707305227689,5.32631753115166,20.8792787079585,10.7054320570607,12.3154252312132,13.3300836267571,13.2575579241002,22.4704852163555,23.7751854862164,22.9012464242522,3.03468641524931,6.85491075658373,12.3978509240388,9.16430975303914,10.2794818198842,10.9411879028897,16.5679727265554,14.465794502001,12.55989822731,9.25478729413504,8.59712618552732,4.00428253718626,5.30709286805648,5.8464149220062,7.50582449137461,4.58236603529592,8.65727896056827,13.8094145976389,7.7824908852017,6.31491250332587,41.6927798929328,10.0478055870496,10.2972432127805,10.1031551178845,7.53469136792031,8.20153986317724,41.7542209776527,7.20067364727842,10.2667935158476,9.50572480341054,18.3058393665032,19.5982321206924,29.5174114698657,36.2948585015506,37.2018940090611,36.7631384816966,35.2395038733046,35.2306126638837,31.2559817177271,29.0744607748838,24.1266054302836,22.3001330365671,11.8023425524569,19.0396354950265,3.69266356971921,2.57865710502847,17.0492343191742,12.6235463602186,5.67914794949262,7.02789739733949,6.46270193198397,11.4705023017225,14.0363164671908,18.3999745012741,8.50102473517278,14.028281179743,9.48690667071656,2.89189184779626,23.1362338889478,8.01295216502649,13.5196176263468,21.6110861094021,6.63725691699814,5.58395463156457,4.53485335447127,6.78978287121233,9.44966057218473,10.1453598821496,17.0562673491026,10.9060118843252,12.83390562185,12.9575070753685,12.6502330289999,11.3449097573006,5.10659408630682,5.94201610303324,3.75140182969988,4.07240366560025,5.49754724291048,7.13475270408282,7.89835298890181,3.65357938937519,24.6405293466896,24.9961843619308,8.38007912608855,54.5773497236299,33.9075296061402,32.9911699357013,29.4849689687747,28.2322347561505,17.7803310344209,5.37733375830478,17.5997007221788,17.1301100409475,14.0747840800981,10.5486335922627,13.2593400889394,15.0993594316305,22.6071311891828,19.3133004206648,25.5669951538184,19.0934123603023,3.47969592939249,13.2157653632452,11.7725821495763,16.3088870891286,13.9752040797554,19.8250589185686,21.8205123114887,16.2288684030098,35.3848877086595,13.6694648879124,1.12738587736838,6.57872802593507,5.12921320417003,9.13920585217024,9.94530640778529,12.6717094118084,12.0877955805127,10.0257376329842,6.50127935439407,2.89900944991207,4.32045009386798,30.0210564596769,6.89265731986558,5.85452455839515,9.87398254631242,13.7850555663961,16.490552446845,18.7504901251151,23.6303243479324,25.6454782868295,25.1482461961499,27.5255485423575,30.9916060752413,26.5544682927309,34.2449323391997,20.405734525369,5.77163478772568,9.15081337416652,5.37230772365051,32.2626622033758,32.4690682530545,18.4983140509938,20.7937327706694,11.5361583928134,1.6942555278512,1.84130094602871,1.14579102687879,2.23409137046794,0,0,1.35004500046361,0.900642406448441,1.35942722695261,0,6.01966615988225,4.78829848081237,6.82934423016537,12.1553358534147,8.59413966774727,14.7074806760011,15.5572709461131,17.7190149225449,19.5760717851007,13.1402550117175,18.5039888919875,17.1649970661329,17.1363958669885,20.6160990743679,18.7813983484855,17.1465728861907,22.1339062554674,18.9051036054431,16.4834360321323,22.227036940294,14.7433778525729,16.8602015851371,17.8827142460491,18.6043413289381,16.5632509530982,18.1075260888188,20.6708609346233,14.2057644176435,17.654534799962,16.2731258780744,18.0325227548745,19.3068785456104,23.3261694606723,18.7473577835019,17.9403148212461,10.2422336954558,19.1823918925235,21.2722343507815,25.8239248292939,28.676884485537,22.2593122195605
|phase1_expression=5.60520964866779,33.850614541018,40.9499315450582,18.4503168897166,21.5385163876929,15.4448930158939,14.9512089981136,52.5531926407215,19.006477490475,9.59664557920173,5.65019295144166,1.91453181588807,50.1618138698433,38.7272382716158,10.6595123781012,9.51633756732182,2.09868563438444,20.5050407482854,27.834230021965,16.9755860719212,10.4603246885816,8.53902180327614,4.17919662622297,28.6386436800198,33.4937550358068,32.1569899904411,29.7225777349762,32.7516273682551,32.3039813075836,39.8207605020691,26.164200257326,0,1.23012957516914,0,9.82095507154334,7.31432439577366,8.77928231928187,94.1696169158042,50.786797394047,74.8638953882532,91.7641121328382,73.0858668905537,79.138187544078,26.9419190467735,24.026332699025,15.9685674380663,13.3006528539167,4.36050312760893,5.93152693383074,7.58276606389705,14.6985742706631,4.31257693094915,21.9795213935635,53.6767985088395,47.3892256790874,41.6760286378234,42.9800159908135,29.3933092598142,1.21389876515759,1.05798195854407,0,14.5703148789727,16.0073063300005,4.94944844504769,4.94433181283487,2.8419204597844,1.79760066311043,2.68952813725088,1.14058573539325,0.675029691658453,0.841299845405528,1.42825492201902,1.76694832761291,1.10241719293459,0.766763768145891,0,3.30347642998166,1.53224805702225,2.15049146558741,1.18697658957174,0.914876436024097,0.52091337055676,3.90856198601933,1.12552522006336,2.29197371665215,4.12480019663135,4.55589378557129,2.79599168737951,26.2012628932817,45.9475085449256,30.4357713136762,8.60423876981386,5.439770669662,2.15881276655127,7.79731700937203,7.6164570806547,12.2186645514624,58.1167399991177,39.4874726996361,39.9273719196684,7.46470124816407,35.931413676009,96.8259910885254,71.1066703153331,11.2575341325831,11.6545538118545,15.6712577954583,9.24889425724386,56.1895207514363,13.0629082377046,6.24547176358089,6.39377504455497,9.4552353874984,9.19408107370998,13.1699351991989,15.3313241422204,15.8204779349999,42.8014096482938,10.6153266233985,32.5151368394292,23.1883594383413,25.2135131630315,24.2309289583559,0.585561594023094,0.83778682725382,29.377561348988,12.1013275750979,8.99854096490112,13.4694440697449,3.89455662452539,2.74500361691176,1.13088916901578,2.25971616249959,1.53429274398198,3.1168206683934,1.94689515681309,16.8034950353022,21.0247780331057,6.82351447770922,16.8353484709179,4.81445638962004,3.90833577536904,5.76198815377118,7.9873553452929,8.23241639731067,7.04625461566674,7.77724313845749,12.9351685369508,2.80238390812695,9.26619792822314,8.79755620819744,10.7405908889512,15.0145514581823,23.6811473235073,26.3401134602168,7.56330213910274,8.42655824775882,10.0365683774739,13.924011470384,13.2560494422721,11.7263029990548,11.523971933505,17.5191104333056,20.2667158699826,18.8205877722601,19.0677834695334,23.6080593231665,27.556620798652,24.1902979372816,29.221808606079,30.9682852465169,28.8013975227905,24.1505126820156,28.0491415209177,1.89260953707715,1.9551876352064,47.9107235326507,15.073682299822,5.54549451391608,6.0381534683714,7.98978260196979,7.66397393568702,5.33707305227689,5.32631753115166,20.8792787079585,10.7054320570607,12.3154252312132,13.3300836267571,13.2575579241002,22.4704852163555,23.7751854862164,22.9012464242522,3.03468641524931,6.85491075658373,12.3978509240388,9.16430975303914,10.2794818198842,10.9411879028897,16.5679727265554,14.465794502001,12.55989822731,9.25478729413504,8.59712618552732,4.00428253718626,5.30709286805648,5.8464149220062,7.50582449137461,4.58236603529592,8.65727896056827,13.8094145976389,7.7824908852017,6.31491250332587,41.6927798929328,10.0478055870496,10.2972432127805,10.1031551178845,7.53469136792031,8.20153986317724,41.7542209776527,7.20067364727842,10.2667935158476,9.50572480341054,18.3058393665032,19.5982321206924,29.5174114698657,36.2948585015506,37.2018940090611,36.7631384816966,35.2395038733046,35.2306126638837,31.2559817177271,29.0744607748838,24.1266054302836,22.3001330365671,11.8023425524569,19.0396354950265,3.69266356971921,2.57865710502847,17.0492343191742,12.6235463602186,5.67914794949262,7.02789739733949,6.46270193198397,11.4705023017225,14.0363164671908,18.3999745012741,8.50102473517278,14.028281179743,9.48690667071656,2.89189184779626,23.1362338889478,8.01295216502649,13.5196176263468,21.6110861094021,6.63725691699814,5.58395463156457,4.53485335447127,6.78978287121233,9.44966057218473,10.1453598821496,17.0562673491026,10.9060118843252,12.83390562185,12.9575070753685,12.6502330289999,11.3449097573006,5.10659408630682,5.94201610303324,3.75140182969988,4.07240366560025,5.49754724291048,7.13475270408282,7.89835298890181,3.65357938937519,24.6405293466896,24.9961843619308,8.38007912608855,54.5773497236299,33.9075296061402,32.9911699357013,29.4849689687747,28.2322347561505,17.7803310344209,5.37733375830478,17.5997007221788,17.1301100409475,14.0747840800981,10.5486335922627,13.2593400889394,15.0993594316305,22.6071311891828,19.3133004206648,25.5669951538184,19.0934123603023,3.47969592939249,13.2157653632452,11.7725821495763,16.3088870891286,13.9752040797554,19.8250589185686,21.8205123114887,16.2288684030098,35.3848877086595,13.6694648879124,1.12738587736838,6.57872802593507,5.12921320417003,9.13920585217024,9.94530640778529,12.6717094118084,12.0877955805127,10.0257376329842,6.50127935439407,2.89900944991207,4.32045009386798,30.0210564596769,6.89265731986558,5.85452455839515,9.87398254631242,13.7850555663961,16.490552446845,18.7504901251151,23.6303243479324,25.6454782868295,25.1482461961499,27.5255485423575,30.9916060752413,26.5544682927309,34.2449323391997,20.405734525369,5.77163478772568,9.15081337416652,5.37230772365051,32.2626622033758,32.4690682530545,18.4983140509938,20.7937327706694,11.5361583928134,1.6942555278512,1.84130094602871,1.14579102687879,2.23409137046794,0,0,1.35004500046361,0.900642406448441,1.35942722695261,0,6.01966615988225,4.78829848081237,6.82934423016537,12.1553358534147,8.59413966774727,14.7074806760011,15.5572709461131,17.7190149225449,19.5760717851007,13.1402550117175,18.5039888919875,17.1649970661329,17.1363958669885,20.6160990743679,18.7813983484855,17.1465728861907,22.1339062554674,18.9051036054431,16.4834360321323,22.227036940294,14.7433778525729,16.8602015851371,17.8827142460491,18.6043413289381,16.5632509530982,18.1075260888188,20.6708609346233,14.2057644176435,17.654534799962,16.2731258780744,18.0325227548745,19.3068785456104,23.3261694606723,18.7473577835019,17.9403148212461,10.2422336954558,19.1823918925235,21.2722343507815,25.8239248292939,28.676884485537,22.2593122195605
|short_description=p2@Cast
}}
}}

Revision as of 20:28, 17 April 2012

Short description:p2@Cast
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cast_5end
Coexpression cluster:NA
Association with transcript: 79bp_to_uc007rfq.1_5end
EntrezGene:Cast
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cast

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I533.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I640.95
CD326+ enterocyte, pool1.CNhs13542.11848-124I318.45
CD326+ enterocyte, pool2.CNhs13197.11849-124I421.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.44
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.95
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E952.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E450.16
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E838.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.52
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A427.83
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D128.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D233.49
GP2+ M cell, pool1.CNhs13228.11845-124H932.16
GP2+ M cell, pool2.CNhs13231.11846-124I129.72
GP2+ M cell, pool3.CNhs13240.11847-124I232.75
Ileum epithelium, pool1.CNhs13199.10252-104B932.30
Ileum epithelium, pool2.CNhs13232.10253-104C139.82
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C826.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G894.17
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H150.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H374.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G991.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H273.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H479.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D826.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D924.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A221.98
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I953.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A147.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C141.68
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E142.98
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C529.39
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.57
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D926.20
Mouse Schwann, donor2.CNhs12573.11746-123F945.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G330.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I758.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E339.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I839.93
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H135.93
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I896.83
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B671.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.26
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.25
accessory axillary lymph node, adult.CNhs10475.1063-29H956.19
adrenal gland, adult.CNhs10508.49-24D713.06
adrenal gland, embryo E14.CNhs11038.406-44C56.25
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I19.46
adrenal gland, embryo E18.CNhs11026.1262-18F59.19
adrenal gland, neonate N00.CNhs11191.1311-23C113.17
adrenal gland, neonate N25.CNhs11223.1377-27I315.33
amnion, adult pregnant day17.5.CNhs10488.583-22A815.82
aorta, adult.CNhs10498.46-23H142.80
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F532.52
bone (os femoris), neonate N16.CNhs11225.1525-43A623.19
bone (os femoris), neonate N20.CNhs11195.1350-25C325.21
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H729.38
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.10
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.47
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.80
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A221.02
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G416.84
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D47.99
eyeball, neonate N00.CNhs11207.633-15C68.23
eyeball, neonate N01.CNhs11140.1532-43E77.05
eyeball, neonate N02.CNhs11205.1551-44G87.78
eyeball, neonate N16.CNhs11188.777-19A212.94
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H29.27
forelimb, embryo E13.CNhs10589.384-1E28.80
forelimb, embryo E14.CNhs10577.413-26A810.74
forelimb, embryo E15.CNhs11007.437-20E715.01
forelimb, embryo E17.CNhs10598.1517-43C423.68
forelimb, embryo E18.CNhs11008.1520-43B526.34
gonad, embryo E13.CNhs11044.1564-45I67.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.04
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.92
heart, embryo E11.CNhs10586.331-24E913.26
heart, embryo E12.CNhs11015.353-12F511.73
heart, embryo E13.CNhs11013.376-3I911.52
heart, embryo E14.CNhs10597.403-26D417.52
heart, embryo E15.CNhs11017.431-16C820.27
heart, embryo E16.CNhs11021.457-17C618.82
heart, embryo E17.CNhs11025.479-18E519.07
heart, embryo E18.CNhs11030.1283-20G323.61
heart, neonate N00.CNhs11213.639-21E327.56
heart, neonate N03.CNhs11221.1349-25I224.19
heart, neonate N10.CNhs11118.749-24G129.22
heart, neonate N16.CNhs11209.782-15G130.97
heart, neonate N20.CNhs11127.821-26I628.80
heart, neonate N25.CNhs11196.1351-25D324.15
heart, neonate N30.CNhs11202.1390-42D228.05
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I347.91
intestine, adult.CNhs10496.178-9A315.07
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D87.99
intestine, embryo E16.CNhs10585.463-22H47.66
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F75.33
intestine, neonate N00.CNhs11126.644-26D120.88
intestine, neonate N01.CNhs11192.1322-23E910.71
intestine, neonate N06.CNhs11102.688-20B812.32
intestine, neonate N07.CNhs11095.720-20F213.33
intestine, neonate N10.CNhs11098.755-23A513.26
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E323.78
intestine, neonate N30.CNhs11131.1384-42G122.90
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F86.85
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I29.16
kidney, embryo E18.CNhs11001.1288-20C710.28
kidney, neonate N00.CNhs11214.646-21G710.94
kidney, neonate N10.CNhs11206.758-6D516.57
kidney, neonate N20.CNhs11113.832-19I114.47
kidney, neonate N25.CNhs11122.1353-25F312.56
kidney, neonate N30.CNhs11203.1385-42H19.25
liver, adult pregnant day01.CNhs10466.508-5B28.60
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H65.31
liver, embryo E14.CNhs10594.409-16E15.85
liver, embryo E15.CNhs10520.433-16D77.51
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A38.66
liver, embryo E18.CNhs10579.499-43G413.81
liver, neonate N00.CNhs11117.641-24F47.78
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A841.69
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B910.30
liver, neonate N20.CNhs11220.823-25A310.10
liver, neonate N25.CNhs11198.1368-26H17.53
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B141.75
lung, embryo E12.CNhs10522.354-16G27.20
lung, embryo E14.CNhs10604.404-26F810.27
lung, embryo E15.CNhs11020.432-17C59.51
lung, embryo E16.CNhs10998.458-17B618.31
lung, embryo E17.CNhs10605.480-44A619.60
lung, embryo E18.CNhs10583.1287-20I629.52
lung, neonate N00.CNhs11224.640-42C636.29
lung, neonate N06.CNhs11212.683-20E537.20
lung, neonate N07.CNhs11111.715-19A336.76
lung, neonate N10.CNhs11219.750-23E635.24
lung, neonate N20.CNhs11109.822-18A435.23
lung, neonate N25.CNhs11119.1359-25C731.26
lung, neonate N30.CNhs11133.1394-42H229.07
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A122.30
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H219.04
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.05
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.62
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.47
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.03
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.49
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I723.14
ovary, embryo E18.CNhs11040.505-44H78.01
ovary, neonate N00.CNhs11217.1299-22I413.52
oviduct, adult pregnant day01.CNhs10500.988-6G621.61
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F45.58
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E56.79
pancreas, embryo E17.CNhs10599.1558-45G39.45
pancreas, embryo E18.CNhs10580.1535-43I710.15
pancreas, neonate N00.CNhs11105.645-26G917.06
pancreas, neonate N01.CNhs11138.1531-43D710.91
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B612.96
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E65.94
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F67.13
pituitary gland, embryo E17.CNhs11039.1265-44F57.90
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I724.64
placenta, adult pregnant day17.CNhs10464.577-18G325.00
prostate, adult.CNhs10470.859-1F88.38
skin, adult.CNhs10492.30-1C354.58
skin, neonate N00.CNhs11124.650-25G433.91
skin, neonate N03.CNhs11215.662-22H332.99
skin, neonate N06.CNhs11097.693-20I529.48
skin, neonate N10.CNhs11108.762-6C428.23
small intestine, neonate N16.CNhs11114.790-21I117.78
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G217.60
spleen, embryo E16.CNhs11035.461-43C117.13
spleen, embryo E18.CNhs11011.1271-21F214.07
spleen, neonate N10.CNhs11116.752-24D110.55
spleen, neonate N20.CNhs11112.824-19H113.26
spleen, neonate N25.CNhs11099.1354-25G315.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D325.57
stomach, adult.CNhs10503.33-1H619.09
stomach, embryo E12.CNhs10588.356-43E33.48
stomach, embryo E15.CNhs10603.1252-16G813.22
stomach, embryo E16.CNhs11022.459-17D411.77
stomach, embryo E17.CNhs11006.1035-18D516.31
stomach, embryo E18.CNhs10999.1286-20C613.98
stomach, neonate N03.CNhs11193.1340-24B819.83
stomach, neonate N07.CNhs11210.718-18A921.82
stomach, neonate N25.CNhs11104.1355-25E416.23
stomach, neonate N30.CNhs11134.1386-42I135.38
submandibular gland, adult.CNhs10469.59-29C113.67
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F56.58
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G59.14
testis, embryo E17.CNhs11029.486-18I59.95
testis, embryo E18.CNhs11027.503-18G512.67
testis, neonate N00.CNhs11189.1300-22B712.09
testis, neonate N07.CNhs11222.726-26I410.03
testis, neonate N10.CNhs11204.763-44D96.50
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B530.02
thymus, embryo E14.CNhs11041.402-44I46.89
thymus, embryo E15.CNhs11005.430-45I25.85
thymus, embryo E16.CNhs11002.456-26C59.87
thymus, embryo E17.CNhs10581.478-18C113.79
thymus, embryo E18.CNhs10595.1273-19G416.49
thymus, neonate N02.CNhs11181.1541-43F818.75
thymus, neonate N03.CNhs11137.2104-43C723.63
thymus, neonate N06.CNhs11197.681-26C425.65
thymus, neonate N07.CNhs11211.713-19D325.15
thymus, neonate N10.CNhs11194.748-24E427.53
thymus, neonate N20.CNhs11186.820-7A230.99
thymus, neonate N25.CNhs11125.1362-25G726.55
thymus, neonate N30.CNhs11132.1393-42G234.24
tongue, adult.CNhs10499.32-1B420.41
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.37
urinary bladder, adult.CNhs10481.879-12E432.26
uterus, adult pregnant day19.CNhs10497.590-15F532.47
uterus, adult.CNhs10509.92-27E518.50
vagina, adult.CNhs10502.89-27D520.79
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I86.02
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H26.83
whole body, embryo E14.5.CNhs10578.420-27D212.16
whole body, embryo E14.CNhs10519.395-14B18.59
whole body, embryo E16.CNhs10514.453-14F214.71
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.72
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.14
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.50
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.16
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.14
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G522.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.91
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.23
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G520.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.31
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G523.33
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G518.75
whole body, embryo E17.5.CNhs10513.490-9F917.94
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B319.18
whole body, neonate N00.CNhs10525.657-19C221.27
whole body, neonate N01.CNhs10576.659-23C625.82
whole body, neonate N06.CNhs10515.692-21D128.68
whole body, neonate N10.CNhs10518.761-6B422.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:74946058..74946128,-&oldid=758859"