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FFCP PHASE1:Mm9::chr17:15841927..15841958,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:15841927..15841958,+
|short_description=p1@Chd1
|description=CAGE_peak_1_at_Chd1_5end
|association_with_transcript=0bp_to_ENSMUST00000024627,ENSMUST00000173311,NM_007690,uc008aot.2,uc008aou.2,uc012akw.1,uc012akx.1_5end
|EntrezGene=12648
|EntrezGene=12648
|HGNC=
|HGNC=
|UniProt=P40201,Q8C7Q2,Q9CRD9,Q3UQG5
|UniProt=P40201,Q8C7Q2,Q9CRD9,Q3UQG5
|association_with_transcript=0bp_to_ENSMUST00000024627,ENSMUST00000173311,NM_007690,uc008aot.2,uc008aou.2,uc012akw.1,uc012akx.1_5end
|description=CAGE_peak_1_at_Chd1_5end
|id=chr17:15841927..15841958,+
|ontology_enrichment_disease=
|phase1_expression=15.0539916278506,36.9913932097723,34.1249429542152,45.3696316960245,36.064492556137,25.853407874431,20.5579123724063,33.5720640948098,117.558582996642,155.418845477804,49.1395568807199,51.213726075006,36.4657554753468,41.1750095393478,23.9839028507277,20.4500020063724,22.3859801001007,29.8111746263535,35.9239816047036,30.9804445812562,16.2432684188543,18.170244069762,16.7167865048919,19.679068003589,15.1410125504332,24.1177424928308,24.9841957772263,17.2376986148711,10.6413114895569,23.9428623271934,13.5255611499736,13.9706748161119,13.5314253268605,0,14.1537293678125,13.4650062740379,16.9460565697766,24.2748345827406,18.7520482685712,32.4584721263755,27.0586484494267,38.250547157673,29.1306211818692,18.8845226963366,18.5519784131712,19.2724089769766,10.1710874765245,5.23260375313072,3.73466510648602,7.77719596297134,5.31948402176378,10.062679505548,34.395434241836,49.3246256567714,36.6342241065286,12.6057123657614,12.8940047972441,12.8918023069361,9.3065571995415,7.93486468908049,8.23980824558033,7.45457970552091,5.33576877666684,9.89889689009539,7.9109309005358,7.104801149461,8.68840320503374,8.06858441175265,16.4866483570479,10.8004750665353,14.302097371894,7.14127461009509,5.07997644188711,12.9840247167851,11.3097655801519,10.1114066527102,8.8092704799511,11.7472351038373,9.67721159514334,9.62769900430415,8.59983849862651,7.8137005583514,7.53794097303729,7.31591393041184,9.32069311438542,12.374400589894,10.9626194215309,13.6071595452469,24.0809294799525,18.2127459857353,41.7404863730416,20.6501730475533,31.9586526842643,6.47643829965381,10.3964226791627,19.7131830322828,10.9546647702766,11.2484012901518,4.93593408745451,8.12681021373782,12.9575946194546,28.2318250311499,66.2493623237279,92.4386714099331,15.8038459938186,14.6948721975557,15.1657333504435,19.1828917928021,29.5189187357776,14.9926560455473,12.3174582003956,10.9607572192371,11.5307748628029,11.4549206819993,15.1689432205059,13.1949920896159,21.0115722574218,16.7735254027098,12.3845477272982,14.8825501951616,20.0965781798958,16.9706338597328,18.6391761218122,17.8596286177044,15.9179497178226,15.5828803677241,38.2210247173886,23.3962065087429,26.1764667770513,10.0359728401231,11.4375150704657,11.8115090986093,10.4294592115366,10.4843337505436,9.55825004973976,10.707923362472,19.0439610400091,15.5508713262616,13.6470289554184,15.7831391914855,19.9084277732937,13.7941262660084,18.3663372401456,14.9197769657358,21.5675702309709,18.8327168818729,17.9907311154679,18.1092359517311,21.9879352791499,26.0966390631591,20.4103304030181,14.9053098050751,17.2389294519871,20.89512999133,16.6683530490434,18.3111525473014,14.7464769335779,15.9555702411123,19.3231179589003,18.8484453007307,14.7751417788091,14.2249028554202,14.9149183418682,16.1346670032871,15.7352455145126,14.8821724640261,15.5598572811779,13.6615450569588,14.4812667923863,14.4467368389604,15.8084178614419,15.2047986922346,10.3188554186794,14.6284996448805,14.5100064509248,15.4356918568927,20.1555457620117,26.4450566663544,20.2623838008472,26.2427439202296,20.3610588888907,14.117846723634,15.7888411129858,10.4624094361908,15.1849299694244,12.6818195137488,12.3154252312132,9.15199771389294,15.5971269695296,13.4822911298133,16.4264917904768,14.7364542208232,10.6214024533726,20.7932292949706,14.6520056375005,15.8848035719345,16.0980564349129,21.5316967063278,18.4018323031589,16.679946721695,11.1469096767376,11.9695249004147,14.8226313543574,20.5219480030796,17.6903095601883,18.2138311031732,18.8659912891308,12.7823894668781,12.4766667372896,18.9879450717535,20.9154442539796,12.3552635934637,25.8782771749238,15.2577788544086,14.0416952901552,15.4073115547738,14.8899853223187,13.0259750768109,20.1380977281599,21.4125295300648,20.6965520081373,19.3509397783714,20.1833613528112,23.1158635269706,19.5195785526531,26.7333097565184,22.5418256071853,18.8244986201459,26.6289463658003,16.0586048421423,16.0597033135283,22.9992003144603,24.1266054302836,10.3342079925555,17.2117495556663,20.1433824802455,11.2385412991454,8.55645312123083,14.4262751931474,12.1186045058099,18.2994767261429,15.6175497718655,20.4652227846159,23.6579109973027,19.3834846451683,33.4030306330822,23.074209995469,21.3346776275258,23.7172666767914,14.7807805554031,17.458630480617,15.1355763117167,19.220661203722,18.806594018869,15.9294166007955,14.8096188054539,12.9999129494843,8.86443874852721,12.993283286754,16.6014979889721,15.5056975900933,17.0860852854428,14.2598951353889,14.5376908650475,16.8669773719998,16.5016869197099,11.9153862013826,21.0671480016633,8.92574918101006,18.2186479776853,15.6059405605201,16.7666688545946,15.3030589159972,7.61162372786498,23.7018425144347,22.8778636532926,20.5091410191115,35.4505443824182,29.2250612319589,22.3157822234177,20.4126708245363,24.6211349617592,21.8610627472388,11.6817940266621,21.8714727421251,17.1301100409475,17.2230910453832,12.2439497053049,20.7775226135958,16.0144721244566,32.2959016988325,37.3670377704167,39.9397924294785,9.54670618015114,21.5108475635172,17.0788352386553,14.7967316925868,15.4725339050707,13.1017538247707,13.2167059457124,15.5388496763632,13.0877970992015,18.6645561540182,16.1548221402601,14.6560164057889,18.0915020713214,15.222181122053,14.3893879374595,13.949260935595,14.8681390431885,19.8333733311324,18.228613878153,19.7135567520336,19.8098979077325,15.8416503441826,45.5056013704577,12.1635129174099,14.7903778317351,18.0589943939135,27.9281645241271,28.8087964432834,29.9286669304722,26.5841148914239,34.3285929823702,36.2744399677799,37.7089932411784,40.6399362684768,41.0824563804207,45.2313611442672,17.6849699219865,33.7418649128578,28.0804371187659,28.2046155491652,18.3530114330581,15.9530104133505,17.948859178192,22.723048182381,11.034586288778,11.8597886949584,11.5081309126794,6.30185064783336,12.0297227640581,12.3314853558716,15.8632718451837,14.8504950050997,7.20513925158753,12.6879874515577,11.39072685854,23.9748772919448,25.138567024265,13.4879548545766,19.9347507996001,16.7690530102386,22.0612210140017,21.1134391411534,19.7793654949338,26.6362943961207,26.7859044469625,19.7713853914387,26.5963141354367,24.3467919421694,20.8721996839874,22.6295747685116,23.8146845641537,22.0180219295225,21.0271050305439,21.8405527425753,19.8718542181436,14.7433778525729,17.5701048097744,18.1211504359964,21.5112696615846,21.645157495526,21.8305688360525,17.3781574229134,19.9932980692761,20.2348129630334,20.7622640513363,23.6083686067107,20.3904278517416,19.2338590289754,21.8460946072212,19.2906610981141,14.2392029424629,14.7376913320607,14.6112316752843,20.2765631992974,14.7796250810075,14.1439379728457
|phase1_expression=15.0539916278506,36.9913932097723,34.1249429542152,45.3696316960245,36.064492556137,25.853407874431,20.5579123724063,33.5720640948098,117.558582996642,155.418845477804,49.1395568807199,51.213726075006,36.4657554753468,41.1750095393478,23.9839028507277,20.4500020063724,22.3859801001007,29.8111746263535,35.9239816047036,30.9804445812562,16.2432684188543,18.170244069762,16.7167865048919,19.679068003589,15.1410125504332,24.1177424928308,24.9841957772263,17.2376986148711,10.6413114895569,23.9428623271934,13.5255611499736,13.9706748161119,13.5314253268605,0,14.1537293678125,13.4650062740379,16.9460565697766,24.2748345827406,18.7520482685712,32.4584721263755,27.0586484494267,38.250547157673,29.1306211818692,18.8845226963366,18.5519784131712,19.2724089769766,10.1710874765245,5.23260375313072,3.73466510648602,7.77719596297134,5.31948402176378,10.062679505548,34.395434241836,49.3246256567714,36.6342241065286,12.6057123657614,12.8940047972441,12.8918023069361,9.3065571995415,7.93486468908049,8.23980824558033,7.45457970552091,5.33576877666684,9.89889689009539,7.9109309005358,7.104801149461,8.68840320503374,8.06858441175265,16.4866483570479,10.8004750665353,14.302097371894,7.14127461009509,5.07997644188711,12.9840247167851,11.3097655801519,10.1114066527102,8.8092704799511,11.7472351038373,9.67721159514334,9.62769900430415,8.59983849862651,7.8137005583514,7.53794097303729,7.31591393041184,9.32069311438542,12.374400589894,10.9626194215309,13.6071595452469,24.0809294799525,18.2127459857353,41.7404863730416,20.6501730475533,31.9586526842643,6.47643829965381,10.3964226791627,19.7131830322828,10.9546647702766,11.2484012901518,4.93593408745451,8.12681021373782,12.9575946194546,28.2318250311499,66.2493623237279,92.4386714099331,15.8038459938186,14.6948721975557,15.1657333504435,19.1828917928021,29.5189187357776,14.9926560455473,12.3174582003956,10.9607572192371,11.5307748628029,11.4549206819993,15.1689432205059,13.1949920896159,21.0115722574218,16.7735254027098,12.3845477272982,14.8825501951616,20.0965781798958,16.9706338597328,18.6391761218122,17.8596286177044,15.9179497178226,15.5828803677241,38.2210247173886,23.3962065087429,26.1764667770513,10.0359728401231,11.4375150704657,11.8115090986093,10.4294592115366,10.4843337505436,9.55825004973976,10.707923362472,19.0439610400091,15.5508713262616,13.6470289554184,15.7831391914855,19.9084277732937,13.7941262660084,18.3663372401456,14.9197769657358,21.5675702309709,18.8327168818729,17.9907311154679,18.1092359517311,21.9879352791499,26.0966390631591,20.4103304030181,14.9053098050751,17.2389294519871,20.89512999133,16.6683530490434,18.3111525473014,14.7464769335779,15.9555702411123,19.3231179589003,18.8484453007307,14.7751417788091,14.2249028554202,14.9149183418682,16.1346670032871,15.7352455145126,14.8821724640261,15.5598572811779,13.6615450569588,14.4812667923863,14.4467368389604,15.8084178614419,15.2047986922346,10.3188554186794,14.6284996448805,14.5100064509248,15.4356918568927,20.1555457620117,26.4450566663544,20.2623838008472,26.2427439202296,20.3610588888907,14.117846723634,15.7888411129858,10.4624094361908,15.1849299694244,12.6818195137488,12.3154252312132,9.15199771389294,15.5971269695296,13.4822911298133,16.4264917904768,14.7364542208232,10.6214024533726,20.7932292949706,14.6520056375005,15.8848035719345,16.0980564349129,21.5316967063278,18.4018323031589,16.679946721695,11.1469096767376,11.9695249004147,14.8226313543574,20.5219480030796,17.6903095601883,18.2138311031732,18.8659912891308,12.7823894668781,12.4766667372896,18.9879450717535,20.9154442539796,12.3552635934637,25.8782771749238,15.2577788544086,14.0416952901552,15.4073115547738,14.8899853223187,13.0259750768109,20.1380977281599,21.4125295300648,20.6965520081373,19.3509397783714,20.1833613528112,23.1158635269706,19.5195785526531,26.7333097565184,22.5418256071853,18.8244986201459,26.6289463658003,16.0586048421423,16.0597033135283,22.9992003144603,24.1266054302836,10.3342079925555,17.2117495556663,20.1433824802455,11.2385412991454,8.55645312123083,14.4262751931474,12.1186045058099,18.2994767261429,15.6175497718655,20.4652227846159,23.6579109973027,19.3834846451683,33.4030306330822,23.074209995469,21.3346776275258,23.7172666767914,14.7807805554031,17.458630480617,15.1355763117167,19.220661203722,18.806594018869,15.9294166007955,14.8096188054539,12.9999129494843,8.86443874852721,12.993283286754,16.6014979889721,15.5056975900933,17.0860852854428,14.2598951353889,14.5376908650475,16.8669773719998,16.5016869197099,11.9153862013826,21.0671480016633,8.92574918101006,18.2186479776853,15.6059405605201,16.7666688545946,15.3030589159972,7.61162372786498,23.7018425144347,22.8778636532926,20.5091410191115,35.4505443824182,29.2250612319589,22.3157822234177,20.4126708245363,24.6211349617592,21.8610627472388,11.6817940266621,21.8714727421251,17.1301100409475,17.2230910453832,12.2439497053049,20.7775226135958,16.0144721244566,32.2959016988325,37.3670377704167,39.9397924294785,9.54670618015114,21.5108475635172,17.0788352386553,14.7967316925868,15.4725339050707,13.1017538247707,13.2167059457124,15.5388496763632,13.0877970992015,18.6645561540182,16.1548221402601,14.6560164057889,18.0915020713214,15.222181122053,14.3893879374595,13.949260935595,14.8681390431885,19.8333733311324,18.228613878153,19.7135567520336,19.8098979077325,15.8416503441826,45.5056013704577,12.1635129174099,14.7903778317351,18.0589943939135,27.9281645241271,28.8087964432834,29.9286669304722,26.5841148914239,34.3285929823702,36.2744399677799,37.7089932411784,40.6399362684768,41.0824563804207,45.2313611442672,17.6849699219865,33.7418649128578,28.0804371187659,28.2046155491652,18.3530114330581,15.9530104133505,17.948859178192,22.723048182381,11.034586288778,11.8597886949584,11.5081309126794,6.30185064783336,12.0297227640581,12.3314853558716,15.8632718451837,14.8504950050997,7.20513925158753,12.6879874515577,11.39072685854,23.9748772919448,25.138567024265,13.4879548545766,19.9347507996001,16.7690530102386,22.0612210140017,21.1134391411534,19.7793654949338,26.6362943961207,26.7859044469625,19.7713853914387,26.5963141354367,24.3467919421694,20.8721996839874,22.6295747685116,23.8146845641537,22.0180219295225,21.0271050305439,21.8405527425753,19.8718542181436,14.7433778525729,17.5701048097744,18.1211504359964,21.5112696615846,21.645157495526,21.8305688360525,17.3781574229134,19.9932980692761,20.2348129630334,20.7622640513363,23.6083686067107,20.3904278517416,19.2338590289754,21.8460946072212,19.2906610981141,14.2392029424629,14.7376913320607,14.6112316752843,20.2765631992974,14.7796250810075,14.1439379728457
|short_description=p1@Chd1
}}
}}

Revision as of 01:16, 18 April 2012

Short description:p1@Chd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Chd1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000024627, ENSMUST00000173311, NM_007690, uc008aot.2, uc008aou.2, uc012akw.1, uc012akx.1_5end
EntrezGene:Chd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Chd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I536.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I634.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I345.37
CD326+ enterocyte, pool2.CNhs13197.11849-124I436.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I725.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I820.56
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E933.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7117.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2155.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E649.14
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F151.21
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E436.47
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E841.18
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A123.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A320.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A522.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A229.81
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A435.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A630.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.72
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.14
GP2+ M cell, pool1.CNhs13228.11845-124H924.12
GP2+ M cell, pool2.CNhs13231.11846-124I124.98
GP2+ M cell, pool3.CNhs13240.11847-124I217.24
Ileum epithelium, pool1.CNhs13199.10252-104B910.64
Ileum epithelium, pool2.CNhs13232.10253-104C123.94
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G613.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.15
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.47
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G824.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H118.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H332.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G927.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H238.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H429.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.55
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B319.27
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A234.40
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I949.32
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A136.63
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.61
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.89
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C88.69
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.80
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.61
Mouse Schwann, donor1.CNhs12507.11728-123D924.08
Mouse Schwann, donor2.CNhs12573.11746-123F918.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G341.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F720.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C431.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F619.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.13
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H128.23
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I866.25
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B692.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.69
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.17
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.18
accessory axillary lymph node, adult.CNhs10475.1063-29H929.52
adrenal gland, adult.CNhs10508.49-24D714.99
adrenal gland, embryo E14.CNhs11038.406-44C512.32
adrenal gland, embryo E16.CNhs11004.1254-43D610.96
adrenal gland, embryo E17.CNhs11043.1263-45I111.53
adrenal gland, embryo E18.CNhs11026.1262-18F511.45
adrenal gland, neonate N00.CNhs11191.1311-23C115.17
adrenal gland, neonate N25.CNhs11223.1377-27I313.19
amnion, adult pregnant day17.5.CNhs10488.583-22A821.01
aorta, adult.CNhs10498.46-23H116.77
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F514.88
bone (os femoris), neonate N16.CNhs11225.1525-43A620.10
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B217.86
cerebellum, neonate N30.CNhs11135.1395-42I215.92
colon, adult.CNhs10468.36-18H715.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C738.22
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D123.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D426.18
corpora quadrigemina, adult.CNhs10501.16-22A410.04
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F111.81
cortex, adult.CNhs10473.12-14D510.43
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F29.56
diencephalon, neonate N30.CNhs11201.1388-42B210.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.55
epididymis, adult.CNhs10490.58-23B213.65
eyeball, adult.CNhs10484.31-12G415.78
eyeball, embryo E12.CNhs11016.345-16C619.91
eyeball, embryo E14.CNhs10521.399-16E213.79
eyeball, embryo E15.CNhs10593.426-16C918.37
eyeball, embryo E17.CNhs11023.1261-18D414.92
eyeball, neonate N00.CNhs11207.633-15C621.57
eyeball, neonate N01.CNhs11140.1532-43E718.83
eyeball, neonate N02.CNhs11205.1551-44G817.99
eyeball, neonate N16.CNhs11188.777-19A218.11
forelimb, embryo E11.CNhs10596.335-25E221.99
forelimb, embryo E12.CNhs10600.359-14H226.10
forelimb, embryo E13.CNhs10589.384-1E220.41
forelimb, embryo E14.CNhs10577.413-26A814.91
forelimb, embryo E15.CNhs11007.437-20E717.24
forelimb, embryo E17.CNhs10598.1517-43C420.90
forelimb, embryo E18.CNhs11008.1520-43B516.67
gonad, embryo E13.CNhs11044.1564-45I618.31
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.96
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.32
heart, embryo E11.CNhs10586.331-24E918.85
heart, embryo E12.CNhs11015.353-12F514.78
heart, embryo E13.CNhs11013.376-3I914.22
heart, embryo E14.CNhs10597.403-26D414.91
heart, embryo E15.CNhs11017.431-16C816.13
heart, embryo E16.CNhs11021.457-17C615.74
heart, embryo E17.CNhs11025.479-18E514.88
heart, embryo E18.CNhs11030.1283-20G315.56
heart, neonate N00.CNhs11213.639-21E313.66
heart, neonate N03.CNhs11221.1349-25I214.48
heart, neonate N10.CNhs11118.749-24G114.45
heart, neonate N16.CNhs11209.782-15G115.81
heart, neonate N20.CNhs11127.821-26I615.20
heart, neonate N25.CNhs11196.1351-25D310.32
heart, neonate N30.CNhs11202.1390-42D214.63
hippocampus, adult.CNhs10478.13-16E814.51
hippocampus, neonate N00.CNhs11228.627-43G115.44
intestinal mucosa, adult.CNhs10506.860-29I320.16
intestine, adult.CNhs10496.178-9A326.45
intestine, embryo E12.CNhs11019.1251-16I520.26
intestine, embryo E13.CNhs11010.381-16D526.24
intestine, embryo E15.CNhs10602.976-16D820.36
intestine, embryo E16.CNhs10585.463-22H414.12
intestine, embryo E17.CNhs10582.482-18D315.79
intestine, embryo E18.CNhs10526.1289-20F710.46
intestine, neonate N00.CNhs11126.644-26D115.18
intestine, neonate N01.CNhs11192.1322-23E912.68
intestine, neonate N06.CNhs11102.688-20B812.32
intestine, neonate N07.CNhs11095.720-20F29.15
intestine, neonate N10.CNhs11098.755-23A515.60
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E316.43
intestine, neonate N30.CNhs11131.1384-42G114.74
kidney, embryo E14.CNhs10606.411-4I910.62
kidney, embryo E15.CNhs10997.434-16F820.79
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I215.88
kidney, embryo E18.CNhs11001.1288-20C716.10
kidney, neonate N00.CNhs11214.646-21G721.53
kidney, neonate N10.CNhs11206.758-6D518.40
kidney, neonate N20.CNhs11113.832-19I116.68
kidney, neonate N25.CNhs11122.1353-25F311.15
kidney, neonate N30.CNhs11203.1385-42H111.97
liver, adult pregnant day01.CNhs10466.508-5B214.82
liver, embryo E12.CNhs10601.355-15F820.52
liver, embryo E13.CNhs10524.378-3H617.69
liver, embryo E14.CNhs10594.409-16E118.21
liver, embryo E15.CNhs10520.433-16D718.87
liver, embryo E16.CNhs10523.462-17F512.78
liver, embryo E17.CNhs10510.481-18A312.48
liver, embryo E18.CNhs10579.499-43G418.99
liver, neonate N00.CNhs11117.641-24F420.92
liver, neonate N03.CNhs11123.1345-25G212.36
liver, neonate N06.CNhs11101.684-20A825.88
liver, neonate N07.CNhs11103.716-20H215.26
liver, neonate N10.CNhs11115.751-24B914.04
liver, neonate N20.CNhs11220.823-25A315.41
liver, neonate N25.CNhs11198.1368-26H114.89
liver, neonate N30.CNhs11106.1382-42D113.03
lung, adult.CNhs10474.28-22B120.14
lung, embryo E12.CNhs10522.354-16G221.41
lung, embryo E14.CNhs10604.404-26F820.70
lung, embryo E15.CNhs11020.432-17C519.35
lung, embryo E16.CNhs10998.458-17B620.18
lung, embryo E17.CNhs10605.480-44A623.12
lung, embryo E18.CNhs10583.1287-20I619.52
lung, neonate N00.CNhs11224.640-42C626.73
lung, neonate N06.CNhs11212.683-20E522.54
lung, neonate N07.CNhs11111.715-19A318.82
lung, neonate N10.CNhs11219.750-23E626.63
lung, neonate N20.CNhs11109.822-18A416.06
lung, neonate N25.CNhs11119.1359-25C716.06
lung, neonate N30.CNhs11133.1394-42H223.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.33
mammary gland, adult lactating day02.CNhs10480.595-22B617.21
mammary gland, adult pregnant day19.CNhs10476.588-5H220.14
medulla oblongata, adult.CNhs10477.17-12C211.24
medulla oblongata, neonate N30.CNhs11200.1396-42A38.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.12
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.47
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.66
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.38
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D933.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.33
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.72
olfactory brain, adult.CNhs10489.18-22I914.78
ovary, adult.CNhs10507.91-2I717.46
ovary, embryo E18.CNhs11040.505-44H715.14
ovary, neonate N00.CNhs11217.1299-22I419.22
oviduct, adult pregnant day01.CNhs10500.988-6G618.81
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F414.81
pancreas, embryo E15.CNhs11042.1556-45F213.00
pancreas, embryo E16.CNhs11003.460-26E58.86
pancreas, embryo E17.CNhs10599.1558-45G312.99
pancreas, embryo E18.CNhs10580.1535-43I716.60
pancreas, neonate N00.CNhs11105.645-26G915.51
pancreas, neonate N01.CNhs11138.1531-43D717.09
pancreas, neonate N02.CNhs11139.1539-43D814.26
pancreas, neonate N16.CNhs11136.787-43B614.54
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E621.07
pituitary gland, embryo E13.CNhs11009.370-44C78.93
pituitary gland, embryo E14.CNhs11037.398-44A518.22
pituitary gland, embryo E15.CNhs10592.427-16B915.61
pituitary gland, embryo E16.CNhs11036.449-43F616.77
pituitary gland, embryo E17.CNhs11039.1265-44F515.30
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I723.70
placenta, adult pregnant day17.CNhs10464.577-18G322.88
prostate, adult.CNhs10470.859-1F820.51
skin, adult.CNhs10492.30-1C335.45
skin, neonate N00.CNhs11124.650-25G429.23
skin, neonate N03.CNhs11215.662-22H322.32
skin, neonate N06.CNhs11097.693-20I520.41
skin, neonate N10.CNhs11108.762-6C424.62
small intestine, neonate N16.CNhs11114.790-21I121.86
spinal cord, adult.CNhs10505.24-13C911.68
spleen, adult.CNhs10465.25-2G221.87
spleen, embryo E16.CNhs11035.461-43C117.13
spleen, embryo E18.CNhs11011.1271-21F217.22
spleen, neonate N10.CNhs11116.752-24D112.24
spleen, neonate N20.CNhs11112.824-19H120.78
spleen, neonate N25.CNhs11099.1354-25G316.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C632.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C937.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D339.94
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E321.51
stomach, embryo E15.CNhs10603.1252-16G817.08
stomach, embryo E16.CNhs11022.459-17D414.80
stomach, embryo E17.CNhs11006.1035-18D515.47
stomach, embryo E18.CNhs10999.1286-20C613.10
stomach, neonate N03.CNhs11193.1340-24B813.22
stomach, neonate N07.CNhs11210.718-18A915.54
stomach, neonate N25.CNhs11104.1355-25E413.09
stomach, neonate N30.CNhs11134.1386-42I118.66
submandibular gland, adult.CNhs10469.59-29C116.15
testis, adult.CNhs10504.57-7G514.66
testis, embryo E13.CNhs11031.389-23F518.09
testis, embryo E15.CNhs11034.443-27C515.22
testis, embryo E16.CNhs11033.470-26G514.39
testis, embryo E17.CNhs11029.486-18I513.95
testis, embryo E18.CNhs11027.503-18G514.87
testis, neonate N00.CNhs11189.1300-22B719.83
testis, neonate N07.CNhs11222.726-26I418.23
testis, neonate N10.CNhs11204.763-44D919.71
testis, neonate N20.CNhs11110.839-18H319.81
testis, neonate N30.CNhs11130.1391-42E215.84
thymus, adult.CNhs10471.38-12B545.51
thymus, embryo E14.CNhs11041.402-44I412.16
thymus, embryo E15.CNhs11005.430-45I214.79
thymus, embryo E16.CNhs11002.456-26C518.06
thymus, embryo E17.CNhs10581.478-18C127.93
thymus, embryo E18.CNhs10595.1273-19G428.81
thymus, neonate N02.CNhs11181.1541-43F829.93
thymus, neonate N03.CNhs11137.2104-43C726.58
thymus, neonate N06.CNhs11197.681-26C434.33
thymus, neonate N07.CNhs11211.713-19D336.27
thymus, neonate N10.CNhs11194.748-24E437.71
thymus, neonate N20.CNhs11186.820-7A240.64
thymus, neonate N25.CNhs11125.1362-25G741.08
thymus, neonate N30.CNhs11132.1393-42G245.23
tongue, adult.CNhs10499.32-1B417.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H333.74
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F728.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G528.20
urinary bladder, adult.CNhs10481.879-12E418.35
uterus, adult pregnant day19.CNhs10497.590-15F515.95
uterus, adult.CNhs10509.92-27E517.95
vagina, adult.CNhs10502.89-27D522.72
vesicular gland, adult.CNhs10491.51-27F811.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I823.97
whole body, embryo E12.CNhs10587.857-27C925.14
whole body, embryo E13.CNhs10512.372-23H213.49
whole body, embryo E14.5.CNhs10578.420-27D219.93
whole body, embryo E14.CNhs10519.395-14B116.77
whole body, embryo E16.CNhs10514.453-14F222.06
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G521.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.78
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G526.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G524.35
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G522.02
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.03
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.84
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.87
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.12
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.85
whole body, embryo E17.5.CNhs10513.490-9F919.29
whole body, embryo E17.CNhs10517.475-3I514.24
whole body, embryo E18.CNhs10516.493-3B314.74
whole body, neonate N00.CNhs10525.657-19C214.61
whole body, neonate N01.CNhs10576.659-23C620.28
whole body, neonate N06.CNhs10515.692-21D114.78
whole body, neonate N10.CNhs10518.761-6B414.14





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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