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FFCP PHASE1:Mm9::chr17:36046977..36047021,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:36046977..36047021,-
|short_description=p1@Atat1
|description=CAGE_peak_1_at_Atat1_5end
|association_with_transcript=0bp_to_ENSMUST00000025296,ENSMUST00000056034,ENSMUST00000061052,ENSMUST00000077494,ENSMUST00000127959,ENSMUST00000141662,ENSMUST00000149277,NM_001142744,NM_001142745,NM_028476,uc008cja.2,uc008cjb.2,uc008cjc.2,uc008cjd.2,uc008cje.2_5end
|EntrezGene=73242
|EntrezGene=73242
|HGNC=
|HGNC=
|UniProt=Q8K341,B8JJ73,B8JJ76,B8JJ74
|UniProt=Q8K341,B8JJ73,B8JJ76,B8JJ74
|association_with_transcript=0bp_to_ENSMUST00000025296,ENSMUST00000056034,ENSMUST00000061052,ENSMUST00000077494,ENSMUST00000127959,ENSMUST00000141662,ENSMUST00000149277,NM_001142744,NM_001142745,NM_028476,uc008cja.2,uc008cjb.2,uc008cjc.2,uc008cjd.2,uc008cje.2_5end
|description=CAGE_peak_1_at_Atat1_5end
|id=chr17:36046977..36047021,-
|ontology_enrichment_disease=
|phase1_expression=25.1433689954527,19.5426228278042,28.6649520815408,26.616850595001,33.5600139064053,23.3352187957527,18.221785966451,7.23090611272827,4.646027831005,5.38348410540585,4.96532107853964,3.82906363177615,4.62241970814255,3.4968160967599,2.33176833270964,2.83465374345756,4.19737126876888,6.78243655520211,5.62169177783529,8.06340338416257,20.0702164756525,15.2908064849363,13.0599894569468,11.1994695955385,8.48814339948529,17.8011908875656,12.0613358924541,14.4365725899546,6.46079626151671,5.54466285471848,7.98229838359097,5.08024538767705,3.69038872550742,0,6.93243887403059,6.64938581433969,8.77928231928187,5.85944283031671,3.906676722619,2.61761871986899,12.3528612486513,8.87959130445979,6.79714494243615,31.3483076759187,31.4268486780495,35.0574296628812,32.0780451182696,40.9887293995239,32.0741826792329,31.8865034481825,18.6181940761732,34.5006154475932,5.20126078778983,5.07753499407941,0.672187598284928,13.3774906738692,10.601737277734,14.4388185837684,284.254627507735,250.741724174944,246.560415963904,20.3306719241479,8.89294796111139,12.5985960419396,7.9109309005358,11.3676818391376,60.5192223247178,92.2123932771731,193.588506179928,216.279513207368,196.653838863542,80.5535776018726,73.7700926778389,224.403144161796,262.233208705895,209.581883347085,23.1243350098716,33.326395240234,28.2636021191488,310.987866467797,337.772380180096,280.772306730094,30.4309468911505,21.3849791812038,33.3100180153446,80.1389752488376,87.7009553722474,191.432230862584,10.9045718399785,15.9455991825317,11.5945795480671,6.0229671388697,1.3599426674155,15.6513925574967,10.3964226791627,13.4408066129201,11.7973312910672,11.5892619353079,13.2490862347463,16.2536204274756,28.4503707948895,7.69958864485907,15.2883143823987,35.5533351576666,10.8245520505607,9.62767488805375,11.62706223534,5.36664234679582,22.7865337609511,21.8209944425292,21.3386951922347,15.8322048722313,16.6043158024362,15.2229866958149,17.4031286560843,20.6093209780668,10.6293836125781,17.2073234734695,9.73071607144862,9.86777784679196,5.07935492458905,5.81850303762267,9.31958806090611,26.6430525280508,23.0391377494801,11.240110429178,5.27186547826049,2.39961092397363,3.81210681219194,39.3949381634684,36.6000482254901,256.083569606018,42.7607827673,36.8230258555676,44.2588534911863,37.477731768652,17.9237280376557,10.3257785606377,17.6905930903572,12.8369532090749,47.4939616813869,50.8083650797975,67.523298677006,49.732589885786,51.1634473617985,43.6867786171338,43.196495022035,20.4375662883822,43.1135985865684,54.4625510883319,55.6005552358078,33.0985555965638,27.2486304241086,14.9748431604532,14.610531684964,38.0155449623322,2.1066395619397,2.31613116403244,1.70498099637356,33.1401236056803,27.4395490177883,30.0703642639895,31.0135603616625,28.727577835121,24.5284709490931,24.6485981435432,22.2666923161684,13.4280143722245,17.7724637906559,15.9242440156722,13.0520783368828,9.0643992203706,8.56245449635098,6.84452735677896,45.8432087869797,208.690553905189,19.4947081960441,8.46241813323342,39.2450380984831,37.3901041695306,22.8095406540105,21.176770085451,18.6797556829691,14.0766963323294,12.3377556001573,5.76446341534038,12.8180956488137,11.3405189063456,12.2827374885046,8.98819408654222,13.400559092231,13.7407478545513,33.9505542706016,23.8779391354333,31.5581659884625,23.6235540300565,22.8863934857798,16.2715102145539,20.9945303252534,12.989693022205,10.9899109488962,9.25478729413504,8.00422093135302,10.67808676583,9.43483176543374,6.2961391467759,7.91154473415161,8.20002343158217,6.62027214631691,9.49397253587675,4.05338066937588,4.66754402419738,8.62609239164127,8.93138274404408,10.6092808858951,7.32478746046624,7.89348619496414,10.6137574699941,12.1937105509959,34.8664197657692,36.1782247701297,24.6130374374023,19.0099101113687,29.3135950523178,17.377185784679,12.4885534628991,24.1181770482472,21.4820748959312,22.1642128433907,10.651115456523,12.9513736399422,12.0058718622655,10.5553898757491,4.89515115436839,12.7858710984949,10.2096596132751,34.5183768473753,42.7822656061542,7.54100748732707,5.80683132570058,32.1818383804582,28.8924670779512,37.0528244100414,40.8636644498864,46.1193255350556,48.1230102341015,42.100312974189,40.9158201075837,45.8533822417967,51.7327319439109,27.5363765304041,30.0930870197661,16.125808976004,29.1997117661388,9.2921596837974,25.4919667962731,16.0231485191318,10.3732793865744,13.2885851796348,15.0643222492524,6.46070732920553,15.2684166380552,11.4079161083111,8.21695570633122,3.16255825724996,8.25084345985495,30.6395645178409,42.4944181913892,49.1562998374467,45.6537884617292,37.9508099994465,28.8957484515354,30.1124707701881,17.3545020995322,9.62154003061212,16.7347335982418,20.2886126210565,18.3023740765043,10.4951877352339,11.3388298864933,9.31104283224465,8.20704498725306,11.659233465194,50.9919580528902,4.61351378154202,18.1620443807636,11.8524497516615,5.27431679613135,5.46776910884101,4.57556346413045,8.32894306969891,8.81694149639045,7.46279858543889,10.5013767981662,52.0372709440968,32.3277952731689,17.4968652131318,16.517975385143,14.8486543347401,12.9469772529428,13.3898598275044,8.37619014348895,7.12882353104861,13.6694648879124,31.5668045663147,35.8839710505549,32.4298641295911,30.7232877583595,20.7947315799147,24.4986381961628,21.00694571759,20.5722928053441,21.2864469184193,21.2594026326885,34.275570744686,8.84831137758899,19.0561702372754,16.2283312320427,13.1220031207573,14.143108957731,10.7287931581883,8.41368146639782,8.86137163047463,7.57248374611107,8.38274873204998,12.4016207718314,9.25849867027648,11.5454209968395,8.88264456579924,9.74940649545409,4.66170502085536,5.20340368334959,3.52557694364565,18.5462010270903,15.5776454624481,24.3591660275463,13.076471123823,19.0597399533438,45.1801474093653,28.540164663445,41.2484769676366,34.5424896510812,25.3480532315138,24.9279986138601,29.7009900101995,32.8734478353681,30.8136838109259,27.4412965228465,47.6383925411371,79.8049746802062,63.0007005232755,49.593770281932,54.4994222832754,32.9079880125525,41.5601380989021,43.8854671918845,37.8684667318342,39.1680678233886,39.2892914829872,44.3271902257279,39.5167161522904,44.8176066834085,47.7863101710702,47.6293691283074,44.6154654887694,39.7392994155232,31.7306143618546,40.3325041168249,40.1157025290936,37.6248709057795,42.4416418106231,35.6098720749205,38.3025178290396,40.530397180113,35.6709547101906,34.9882716212331,36.5313066245368,29.1793981262024,43.0645115790752,40.8793601858588,36.0123317989327,39.6638313436073,36.6522560864169,111.665328338262,37.4290573512653,31.3711738910516,13.0076065806813,12.1325280515734,11.3615239454007
|phase1_expression=25.1433689954527,19.5426228278042,28.6649520815408,26.616850595001,33.5600139064053,23.3352187957527,18.221785966451,7.23090611272827,4.646027831005,5.38348410540585,4.96532107853964,3.82906363177615,4.62241970814255,3.4968160967599,2.33176833270964,2.83465374345756,4.19737126876888,6.78243655520211,5.62169177783529,8.06340338416257,20.0702164756525,15.2908064849363,13.0599894569468,11.1994695955385,8.48814339948529,17.8011908875656,12.0613358924541,14.4365725899546,6.46079626151671,5.54466285471848,7.98229838359097,5.08024538767705,3.69038872550742,0,6.93243887403059,6.64938581433969,8.77928231928187,5.85944283031671,3.906676722619,2.61761871986899,12.3528612486513,8.87959130445979,6.79714494243615,31.3483076759187,31.4268486780495,35.0574296628812,32.0780451182696,40.9887293995239,32.0741826792329,31.8865034481825,18.6181940761732,34.5006154475932,5.20126078778983,5.07753499407941,0.672187598284928,13.3774906738692,10.601737277734,14.4388185837684,284.254627507735,250.741724174944,246.560415963904,20.3306719241479,8.89294796111139,12.5985960419396,7.9109309005358,11.3676818391376,60.5192223247178,92.2123932771731,193.588506179928,216.279513207368,196.653838863542,80.5535776018726,73.7700926778389,224.403144161796,262.233208705895,209.581883347085,23.1243350098716,33.326395240234,28.2636021191488,310.987866467797,337.772380180096,280.772306730094,30.4309468911505,21.3849791812038,33.3100180153446,80.1389752488376,87.7009553722474,191.432230862584,10.9045718399785,15.9455991825317,11.5945795480671,6.0229671388697,1.3599426674155,15.6513925574967,10.3964226791627,13.4408066129201,11.7973312910672,11.5892619353079,13.2490862347463,16.2536204274756,28.4503707948895,7.69958864485907,15.2883143823987,35.5533351576666,10.8245520505607,9.62767488805375,11.62706223534,5.36664234679582,22.7865337609511,21.8209944425292,21.3386951922347,15.8322048722313,16.6043158024362,15.2229866958149,17.4031286560843,20.6093209780668,10.6293836125781,17.2073234734695,9.73071607144862,9.86777784679196,5.07935492458905,5.81850303762267,9.31958806090611,26.6430525280508,23.0391377494801,11.240110429178,5.27186547826049,2.39961092397363,3.81210681219194,39.3949381634684,36.6000482254901,256.083569606018,42.7607827673,36.8230258555676,44.2588534911863,37.477731768652,17.9237280376557,10.3257785606377,17.6905930903572,12.8369532090749,47.4939616813869,50.8083650797975,67.523298677006,49.732589885786,51.1634473617985,43.6867786171338,43.196495022035,20.4375662883822,43.1135985865684,54.4625510883319,55.6005552358078,33.0985555965638,27.2486304241086,14.9748431604532,14.610531684964,38.0155449623322,2.1066395619397,2.31613116403244,1.70498099637356,33.1401236056803,27.4395490177883,30.0703642639895,31.0135603616625,28.727577835121,24.5284709490931,24.6485981435432,22.2666923161684,13.4280143722245,17.7724637906559,15.9242440156722,13.0520783368828,9.0643992203706,8.56245449635098,6.84452735677896,45.8432087869797,208.690553905189,19.4947081960441,8.46241813323342,39.2450380984831,37.3901041695306,22.8095406540105,21.176770085451,18.6797556829691,14.0766963323294,12.3377556001573,5.76446341534038,12.8180956488137,11.3405189063456,12.2827374885046,8.98819408654222,13.400559092231,13.7407478545513,33.9505542706016,23.8779391354333,31.5581659884625,23.6235540300565,22.8863934857798,16.2715102145539,20.9945303252534,12.989693022205,10.9899109488962,9.25478729413504,8.00422093135302,10.67808676583,9.43483176543374,6.2961391467759,7.91154473415161,8.20002343158217,6.62027214631691,9.49397253587675,4.05338066937588,4.66754402419738,8.62609239164127,8.93138274404408,10.6092808858951,7.32478746046624,7.89348619496414,10.6137574699941,12.1937105509959,34.8664197657692,36.1782247701297,24.6130374374023,19.0099101113687,29.3135950523178,17.377185784679,12.4885534628991,24.1181770482472,21.4820748959312,22.1642128433907,10.651115456523,12.9513736399422,12.0058718622655,10.5553898757491,4.89515115436839,12.7858710984949,10.2096596132751,34.5183768473753,42.7822656061542,7.54100748732707,5.80683132570058,32.1818383804582,28.8924670779512,37.0528244100414,40.8636644498864,46.1193255350556,48.1230102341015,42.100312974189,40.9158201075837,45.8533822417967,51.7327319439109,27.5363765304041,30.0930870197661,16.125808976004,29.1997117661388,9.2921596837974,25.4919667962731,16.0231485191318,10.3732793865744,13.2885851796348,15.0643222492524,6.46070732920553,15.2684166380552,11.4079161083111,8.21695570633122,3.16255825724996,8.25084345985495,30.6395645178409,42.4944181913892,49.1562998374467,45.6537884617292,37.9508099994465,28.8957484515354,30.1124707701881,17.3545020995322,9.62154003061212,16.7347335982418,20.2886126210565,18.3023740765043,10.4951877352339,11.3388298864933,9.31104283224465,8.20704498725306,11.659233465194,50.9919580528902,4.61351378154202,18.1620443807636,11.8524497516615,5.27431679613135,5.46776910884101,4.57556346413045,8.32894306969891,8.81694149639045,7.46279858543889,10.5013767981662,52.0372709440968,32.3277952731689,17.4968652131318,16.517975385143,14.8486543347401,12.9469772529428,13.3898598275044,8.37619014348895,7.12882353104861,13.6694648879124,31.5668045663147,35.8839710505549,32.4298641295911,30.7232877583595,20.7947315799147,24.4986381961628,21.00694571759,20.5722928053441,21.2864469184193,21.2594026326885,34.275570744686,8.84831137758899,19.0561702372754,16.2283312320427,13.1220031207573,14.143108957731,10.7287931581883,8.41368146639782,8.86137163047463,7.57248374611107,8.38274873204998,12.4016207718314,9.25849867027648,11.5454209968395,8.88264456579924,9.74940649545409,4.66170502085536,5.20340368334959,3.52557694364565,18.5462010270903,15.5776454624481,24.3591660275463,13.076471123823,19.0597399533438,45.1801474093653,28.540164663445,41.2484769676366,34.5424896510812,25.3480532315138,24.9279986138601,29.7009900101995,32.8734478353681,30.8136838109259,27.4412965228465,47.6383925411371,79.8049746802062,63.0007005232755,49.593770281932,54.4994222832754,32.9079880125525,41.5601380989021,43.8854671918845,37.8684667318342,39.1680678233886,39.2892914829872,44.3271902257279,39.5167161522904,44.8176066834085,47.7863101710702,47.6293691283074,44.6154654887694,39.7392994155232,31.7306143618546,40.3325041168249,40.1157025290936,37.6248709057795,42.4416418106231,35.6098720749205,38.3025178290396,40.530397180113,35.6709547101906,34.9882716212331,36.5313066245368,29.1793981262024,43.0645115790752,40.8793601858588,36.0123317989327,39.6638313436073,36.6522560864169,111.665328338262,37.4290573512653,31.3711738910516,13.0076065806813,12.1325280515734,11.3615239454007
|short_description=p1@Atat1
}}
}}

Revision as of 02:02, 18 April 2012

Short description:p1@Atat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Atat1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000025296, ENSMUST00000056034, ENSMUST00000061052, ENSMUST00000077494, ENSMUST00000127959, ENSMUST00000141662, ENSMUST00000149277, NM_001142744, NM_001142745, NM_028476, uc008cja.2, uc008cjb.2, uc008cjc.2, uc008cjd.2, uc008cje.2_5end
EntrezGene:Atat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Atat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G725.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I519.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I628.66
CD326+ enterocyte, pool1.CNhs13542.11848-124I326.62
CD326+ enterocyte, pool2.CNhs13197.11849-124I433.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.22
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.97
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.62
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.06
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.49
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I214.44
Ileum epithelium, pool1.CNhs13199.10252-104B96.46
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.93
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D831.35
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D931.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B335.06
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B732.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C240.99
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B832.07
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C331.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C434.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.20
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.38
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.44
Mouse Granule cells, donor1.CNhs12131.11713-123C3284.25
Mouse Granule cells, donor2.CNhs12357.11731-123E3250.74
Mouse Granule cells, donor3.CNhs12108.11636-122C7246.56
Mouse Meningeal cells, donor1.CNhs12132.11716-123C620.33
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C712.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C860.52
Mouse Microglia, donor2.CNhs12634.11736-123E892.21
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5193.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5216.28
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9196.65
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F180.55
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D573.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2224.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2262.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6209.58
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F333.33
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4310.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4337.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8280.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E430.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I633.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D680.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F687.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1191.43
Mouse Schwann, donor1.CNhs12507.11728-123D910.90
Mouse Schwann, donor2.CNhs12573.11746-123F915.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.59
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C815.65
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.44
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G628.45
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.82
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H922.79
adrenal gland, adult.CNhs10508.49-24D721.82
adrenal gland, embryo E14.CNhs11038.406-44C521.34
adrenal gland, embryo E16.CNhs11004.1254-43D615.83
adrenal gland, embryo E17.CNhs11043.1263-45I116.60
adrenal gland, embryo E18.CNhs11026.1262-18F515.22
adrenal gland, neonate N00.CNhs11191.1311-23C117.40
adrenal gland, neonate N25.CNhs11223.1377-27I320.61
amnion, adult pregnant day17.5.CNhs10488.583-22A810.63
aorta, adult.CNhs10498.46-23H117.21
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F59.87
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B226.64
cerebellum, neonate N30.CNhs11135.1395-42I223.04
colon, adult.CNhs10468.36-18H711.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A439.39
corpus striatum, adult.CNhs10487.19-21D836.60
corpus striatum, neonate N00.CNhs11226.630-43F1256.08
cortex, adult.CNhs10473.12-14D542.76
cortex, neonate N30.CNhs11107.1392-42F236.82
diencephalon, adult.CNhs10482.20-12F244.26
diencephalon, neonate N30.CNhs11201.1388-42B237.48
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.33
epididymis, adult.CNhs10490.58-23B217.69
eyeball, adult.CNhs10484.31-12G412.84
eyeball, embryo E12.CNhs11016.345-16C647.49
eyeball, embryo E14.CNhs10521.399-16E250.81
eyeball, embryo E15.CNhs10593.426-16C967.52
eyeball, embryo E17.CNhs11023.1261-18D449.73
eyeball, neonate N00.CNhs11207.633-15C651.16
eyeball, neonate N01.CNhs11140.1532-43E743.69
eyeball, neonate N02.CNhs11205.1551-44G843.20
eyeball, neonate N16.CNhs11188.777-19A220.44
forelimb, embryo E11.CNhs10596.335-25E243.11
forelimb, embryo E12.CNhs10600.359-14H254.46
forelimb, embryo E13.CNhs10589.384-1E255.60
forelimb, embryo E14.CNhs10577.413-26A833.10
forelimb, embryo E15.CNhs11007.437-20E727.25
forelimb, embryo E17.CNhs10598.1517-43C414.97
forelimb, embryo E18.CNhs11008.1520-43B514.61
gonad, embryo E13.CNhs11044.1564-45I638.02
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E933.14
heart, embryo E12.CNhs11015.353-12F527.44
heart, embryo E13.CNhs11013.376-3I930.07
heart, embryo E14.CNhs10597.403-26D431.01
heart, embryo E15.CNhs11017.431-16C828.73
heart, embryo E16.CNhs11021.457-17C624.53
heart, embryo E17.CNhs11025.479-18E524.65
heart, embryo E18.CNhs11030.1283-20G322.27
heart, neonate N00.CNhs11213.639-21E313.43
heart, neonate N03.CNhs11221.1349-25I217.77
heart, neonate N10.CNhs11118.749-24G115.92
heart, neonate N16.CNhs11209.782-15G113.05
heart, neonate N20.CNhs11127.821-26I69.06
heart, neonate N25.CNhs11196.1351-25D38.56
heart, neonate N30.CNhs11202.1390-42D26.84
hippocampus, adult.CNhs10478.13-16E845.84
hippocampus, neonate N00.CNhs11228.627-43G1208.69
intestinal mucosa, adult.CNhs10506.860-29I319.49
intestine, adult.CNhs10496.178-9A38.46
intestine, embryo E12.CNhs11019.1251-16I539.25
intestine, embryo E13.CNhs11010.381-16D537.39
intestine, embryo E15.CNhs10602.976-16D822.81
intestine, embryo E16.CNhs10585.463-22H421.18
intestine, embryo E17.CNhs10582.482-18D318.68
intestine, embryo E18.CNhs10526.1289-20F714.08
intestine, neonate N00.CNhs11126.644-26D112.34
intestine, neonate N01.CNhs11192.1322-23E95.76
intestine, neonate N06.CNhs11102.688-20B812.82
intestine, neonate N07.CNhs11095.720-20F211.34
intestine, neonate N10.CNhs11098.755-23A512.28
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E313.40
intestine, neonate N30.CNhs11131.1384-42G113.74
kidney, embryo E14.CNhs10606.411-4I933.95
kidney, embryo E15.CNhs10997.434-16F823.88
kidney, embryo E16.CNhs10584.464-22A531.56
kidney, embryo E17.CNhs11028.483-18I223.62
kidney, embryo E18.CNhs11001.1288-20C722.89
kidney, neonate N00.CNhs11214.646-21G716.27
kidney, neonate N10.CNhs11206.758-6D520.99
kidney, neonate N20.CNhs11113.832-19I112.99
kidney, neonate N25.CNhs11122.1353-25F310.99
kidney, neonate N30.CNhs11203.1385-42H19.25
liver, adult pregnant day01.CNhs10466.508-5B28.00
liver, embryo E12.CNhs10601.355-15F810.68
liver, embryo E13.CNhs10524.378-3H69.43
liver, embryo E14.CNhs10594.409-16E16.30
liver, embryo E15.CNhs10520.433-16D77.91
liver, embryo E16.CNhs10523.462-17F58.20
liver, embryo E17.CNhs10510.481-18A36.62
liver, embryo E18.CNhs10579.499-43G49.49
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B910.61
liver, neonate N20.CNhs11220.823-25A37.32
liver, neonate N25.CNhs11198.1368-26H17.89
liver, neonate N30.CNhs11106.1382-42D110.61
lung, adult.CNhs10474.28-22B112.19
lung, embryo E12.CNhs10522.354-16G234.87
lung, embryo E14.CNhs10604.404-26F836.18
lung, embryo E15.CNhs11020.432-17C524.61
lung, embryo E16.CNhs10998.458-17B619.01
lung, embryo E17.CNhs10605.480-44A629.31
lung, embryo E18.CNhs10583.1287-20I617.38
lung, neonate N00.CNhs11224.640-42C612.49
lung, neonate N06.CNhs11212.683-20E524.12
lung, neonate N07.CNhs11111.715-19A321.48
lung, neonate N10.CNhs11219.750-23E622.16
lung, neonate N20.CNhs11109.822-18A410.65
lung, neonate N25.CNhs11119.1359-25C712.95
lung, neonate N30.CNhs11133.1394-42H212.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H210.21
medulla oblongata, adult.CNhs10477.17-12C234.52
medulla oblongata, neonate N30.CNhs11200.1396-42A342.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.54
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E132.18
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E228.89
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E337.05
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D740.86
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D846.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D948.12
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D442.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D540.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D645.85
olfactory brain, adult.CNhs10489.18-22I951.73
ovary, adult.CNhs10507.91-2I727.54
ovary, embryo E18.CNhs11040.505-44H730.09
ovary, neonate N00.CNhs11217.1299-22I416.13
oviduct, adult pregnant day01.CNhs10500.988-6G629.20
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F425.49
pancreas, embryo E15.CNhs11042.1556-45F216.02
pancreas, embryo E16.CNhs11003.460-26E510.37
pancreas, embryo E17.CNhs10599.1558-45G313.29
pancreas, embryo E18.CNhs10580.1535-43I715.06
pancreas, neonate N00.CNhs11105.645-26G96.46
pancreas, neonate N01.CNhs11138.1531-43D715.27
pancreas, neonate N02.CNhs11139.1539-43D811.41
pancreas, neonate N16.CNhs11136.787-43B68.22
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G830.64
pituitary gland, embryo E12.CNhs11018.346-16E642.49
pituitary gland, embryo E13.CNhs11009.370-44C749.16
pituitary gland, embryo E14.CNhs11037.398-44A545.65
pituitary gland, embryo E15.CNhs10592.427-16B937.95
pituitary gland, embryo E16.CNhs11036.449-43F628.90
pituitary gland, embryo E17.CNhs11039.1265-44F530.11
pituitary gland, neonate N00.CNhs11190.1308-22E917.35
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G316.73
prostate, adult.CNhs10470.859-1F820.29
skin, adult.CNhs10492.30-1C318.30
skin, neonate N00.CNhs11124.650-25G410.50
skin, neonate N03.CNhs11215.662-22H311.34
skin, neonate N06.CNhs11097.693-20I59.31
skin, neonate N10.CNhs11108.762-6C48.21
small intestine, neonate N16.CNhs11114.790-21I111.66
spinal cord, adult.CNhs10505.24-13C950.99
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C118.16
spleen, embryo E18.CNhs11011.1271-21F211.85
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H15.47
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.46
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E352.04
stomach, embryo E15.CNhs10603.1252-16G832.33
stomach, embryo E16.CNhs11022.459-17D417.50
stomach, embryo E17.CNhs11006.1035-18D516.52
stomach, embryo E18.CNhs10999.1286-20C614.85
stomach, neonate N03.CNhs11193.1340-24B812.95
stomach, neonate N07.CNhs11210.718-18A913.39
stomach, neonate N25.CNhs11104.1355-25E48.38
stomach, neonate N30.CNhs11134.1386-42I17.13
submandibular gland, adult.CNhs10469.59-29C113.67
testis, adult.CNhs10504.57-7G531.57
testis, embryo E13.CNhs11031.389-23F535.88
testis, embryo E15.CNhs11034.443-27C532.43
testis, embryo E16.CNhs11033.470-26G530.72
testis, embryo E17.CNhs11029.486-18I520.79
testis, embryo E18.CNhs11027.503-18G524.50
testis, neonate N00.CNhs11189.1300-22B721.01
testis, neonate N07.CNhs11222.726-26I420.57
testis, neonate N10.CNhs11204.763-44D921.29
testis, neonate N20.CNhs11110.839-18H321.26
testis, neonate N30.CNhs11130.1391-42E234.28
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I419.06
thymus, embryo E15.CNhs11005.430-45I216.23
thymus, embryo E16.CNhs11002.456-26C513.12
thymus, embryo E17.CNhs10581.478-18C114.14
thymus, embryo E18.CNhs10595.1273-19G410.73
thymus, neonate N02.CNhs11181.1541-43F88.41
thymus, neonate N03.CNhs11137.2104-43C78.86
thymus, neonate N06.CNhs11197.681-26C47.57
thymus, neonate N07.CNhs11211.713-19D38.38
thymus, neonate N10.CNhs11194.748-24E412.40
thymus, neonate N20.CNhs11186.820-7A29.26
thymus, neonate N25.CNhs11125.1362-25G711.55
thymus, neonate N30.CNhs11132.1393-42G28.88
tongue, adult.CNhs10499.32-1B49.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.20
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E418.55
uterus, adult pregnant day19.CNhs10497.590-15F515.58
uterus, adult.CNhs10509.92-27E524.36
vagina, adult.CNhs10502.89-27D513.08
vesicular gland, adult.CNhs10491.51-27F819.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A145.18
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.54
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A341.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D734.54
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A425.35
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A732.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.44
whole body, embryo E11.CNhs11014.324-5I847.64
whole body, embryo E12.CNhs10587.857-27C979.80
whole body, embryo E13.CNhs10512.372-23H263.00
whole body, embryo E14.5.CNhs10578.420-27D249.59
whole body, embryo E14.CNhs10519.395-14B154.50
whole body, embryo E16.CNhs10514.453-14F232.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G541.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G543.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G537.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G539.17
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G539.29
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G544.33
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G539.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G544.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G547.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G547.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G544.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G539.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G531.73
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G540.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G540.12
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G537.62
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G542.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G535.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G538.30
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G540.53
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G535.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G534.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G536.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.18
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G543.06
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G540.88
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G536.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G539.66
whole body, embryo E17.5.CNhs10513.490-9F936.65
whole body, embryo E17.CNhs10517.475-3I5111.67
whole body, embryo E18.CNhs10516.493-3B337.43
whole body, neonate N00.CNhs10525.657-19C231.37
whole body, neonate N01.CNhs10576.659-23C613.01
whole body, neonate N06.CNhs10515.692-21D112.13
whole body, neonate N10.CNhs10518.761-6B411.36





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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