Personal tools

FFCP PHASE1:Mm9::chr13:37918773..37918818,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_3_at_Rreb1_5end
|description=CAGE_peak_3_at_Rreb1_5end
|id=chr13:37918773..37918818,+
|id=chr13:37918773..37918818,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=1.12104192973356,3.14077866875425,3.63999391511629,3.93203474698879,1.50268718983904,3.18970616632591,3.73780224952841,0.774739940649458,6.47628121897667,5.14941957908386,0.856089841127525,0.957265907944037,0.684802919724823,0.699363219351979,0,1.21485160433896,1.39912375625629,0.630924330716475,0.274228867211478,1.27316895539409,3.99703463710028,1.98581902401771,2.35079810225042,3.35984087866154,2.06468352960453,1.14846392823004,2.58457197695445,2.80112602491656,2.28028103347649,3.52842181663903,1.10865255327652,3.17515336729816,3.07532393792285,0,0.577703239502549,1.49611180822643,1.63335485009895,3.34825304589526,2.3440060335714,3.14114246384279,3.52938892818609,2.73218193983378,4.36959317728038,3.02152363141385,2.83855407414641,2.75320128242522,3.9119567217402,0.218025156380447,1.5378032791413,1.55543919259427,1.81982348112971,1.43752564364972,0.671130424230945,1.45072428402269,1.00828139742739,3.08711323243136,2.29226751951005,5.15672092277442,0.404632921719196,0,0,1.69422266034566,2.66788438833342,0.449949858640699,4.94433181283487,2.1314403448383,2.69640099466564,0.768436610643109,0.414758449233911,0.405017814995072,0.210324961351382,0.285650984403804,1.10434270475807,0.122490799214954,0.287536413054709,0,2.20231761998777,1.40456071893706,0.921639199537461,0.131886287730194,0.182975287204819,1.04182674111352,1.11673199600552,0.56276261003168,0.916789486660861,0.294628585473668,1.28134512719193,0.372798891650601,2.57469057332826,3.17400552448499,8.69593466105033,0.860423876981386,1.3599426674155,4.31762553310254,4.54843492213368,4.03224198387602,2.10666630197628,2.72688516124892,2.33807404142582,1.7666978725517,0.845060518660083,5.13305909657271,2.54805239706646,0,3.24736561516821,2.53359865475099,3.53867111510348,3.53970027129086,1.8125651855302,6.38301197978747,4.8575891494518,4.26251669636998,5.07354093963329,6.17962826265753,6.58496759959947,4.52399728786832,13.8429181931249,7.08536848907567,5.30766331169925,3.88240439873782,4.19598885074748,3.87900202508178,1.86391761218122,0.878342391034642,0.83778682725382,2.29911349687732,1.91704199209472,0.599902730993408,3.43089613097275,0.299581278809645,0.915001205637253,0.125654352112864,0.869121600961382,0.255715457330331,1.66230435647648,1.62241263067758,2.03678727700633,3.85661608891288,6.31806896084187,5.26104639716185,1.56144531555244,1.37941262660084,2.16074555766419,1.35634336052144,2.31324097114515,2.3060469651273,2.90475346135159,3.10444044886819,1.29340795759705,1.89106080167819,4.04687585577082,5.04150184583422,5.56094498451196,10.7958171621872,6.1734640922383,3.58261680273288,1.40442637462647,3.08817488537658,1.98914449576915,1.65700618028402,2.34526059981096,1.44049649168812,3.07768156260773,3.14822770795846,3.5481435964097,3.48800917125612,4.02410102099429,2.6856028744449,3.78487654801005,4.26835406605648,4.86412857275134,2.33919979880532,3.29325172936576,3.22095405024892,1.89260953707715,0.102904612379284,1.98251269790279,4.23120906661671,2.98603550749328,4.64473343720877,3.8660238396628,3.22693639397348,3.55804870151792,4.1849637744763,5.21981967698963,5.43506550589236,3.77002813200404,3.97912944082302,4.874102177978,0,1.94524244887225,1.1948476395262,3.79335801906163,3.77020091612105,5.63538678365402,4.88763186828754,5.23671715352589,3.99774173374816,5.75452487830741,5.16635517928608,4.39596437955849,1.97435462274881,7.41131567717872,1.50160595144485,0.786235980452812,2.02375901146368,1.42002084971952,1.20588579876208,1.78238096246994,4.02774592431135,3.40483976227574,2.47105271869273,2.87536413054709,6.32639611036456,4.36852742360385,4.04126204715379,2.87035861635059,1.4473305640901,5.54259570499814,3.60033682363921,5.0519142697028,5.94107800213158,7.97946844180907,14.573044397438,12.6163129669587,11.5128852236101,11.9802709520705,9.7444463445461,10.5240147313941,7.53771247692395,6.21665934717224,6.65385669474953,1.50791283939272,1.08781136763742,7.86822836830458,16.0043312856745,0.481651769963376,0.35163505977661,0.163934945376675,2.52470927204373,0.315508219416257,2.73307121007647,2.80050417052639,3.82350076724083,2.67358408898873,3.67999490025482,2.02405350837447,1.16902343164525,1.18586333383957,2.57057053137446,5.25178315270594,3.5613120733451,3.25773918707152,5.93892442701128,1.32745138339963,5.34117399540959,2.41858845571801,3.39489143560617,4.42952839321159,4.91896236710284,3.10113951801865,4.36240475373007,3.92147116223193,0.948110273807448,4.21674434299995,1.03135543248187,2.7235168460303,1.08036656418786,0.905510786479282,1.50035924522115,1.95074257006501,3.21063871683727,1.15184314421485,1.522324745573,4.22409074514679,5.71946591332314,1.32317038832977,10.3878339353132,6.78150592122803,9.52944213864862,6.80422360817878,7.2221995887827,5.53813589596716,0.370850604021019,1.53783792718067,7.22354037871279,7.40778109478847,2.26042148405629,1.6403307326523,2.28778173206523,3.39956859987711,1.6794174278839,3.04039942369732,0.954670618015114,2.37251995185852,4.26970880966382,3.67218158794124,3.55450103224597,4.36725127492355,5.93403124093211,3.30613822901344,1.57053565190418,4.01806417204558,8.07741107013003,2.25477175473676,6.57872802593507,4.46737924234164,3.50012139019286,5.55387240954244,6.42033276864957,6.45464812551647,4.81756223922615,8.59846624290829,3.14059357073808,3.16833006883652,3.79213344753814,2.02725215290164,2.77319584345034,1.94881234466693,1.9692936523423,2.78153896693771,3.4856680360791,2.06765338044408,2.52416124870369,1.295515713135,2.72230699869469,2.82627854145282,3.65604998233252,3.85693777199178,3.17422537061296,3.55177525398503,1.88399098879899,2.68615386182526,4.82973985080476,3.94133198447482,6.59345847362154,8.1459984050045,1.50471631210609,1.12950368523413,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,1.3492355185943,4.38927360741134,2.73173769206615,5.59145449257076,2.51535795153579,2.02227859295016,4.22268782823069,2.67845574410562,5.13470735346904,3.79045817645696,3.54871019846336,3.77252682772152,5.24392441831341,3.84150914429216,4.47996657853783,2.38146845641537,4.98302601562879,3.08654752741928,6.1812885120496,3.82717192349433,5.48590803816665,3.54951612318675,5.7224685587357,3.92435324907287,3.76437521661322,3.80765735512544,3.84148743032822,4.73525480588117,4.88894809845102,5.05028044491965,3.79632057997357,4.53120618927592,2.04615521584845,3.25367366490529,5.20847849649082,2.74791635731741,4.44470056046276,5.37177635120746,3.63447830930802,3.08827986767322,3.94175320554716
|phase1_expression=1.12104192973356,3.14077866875425,3.63999391511629,3.93203474698879,1.50268718983904,3.18970616632591,3.73780224952841,0.774739940649458,6.47628121897667,5.14941957908386,0.856089841127525,0.957265907944037,0.684802919724823,0.699363219351979,0,1.21485160433896,1.39912375625629,0.630924330716475,0.274228867211478,1.27316895539409,3.99703463710028,1.98581902401771,2.35079810225042,3.35984087866154,2.06468352960453,1.14846392823004,2.58457197695445,2.80112602491656,2.28028103347649,3.52842181663903,1.10865255327652,3.17515336729816,3.07532393792285,0,0.577703239502549,1.49611180822643,1.63335485009895,3.34825304589526,2.3440060335714,3.14114246384279,3.52938892818609,2.73218193983378,4.36959317728038,3.02152363141385,2.83855407414641,2.75320128242522,3.9119567217402,0.218025156380447,1.5378032791413,1.55543919259427,1.81982348112971,1.43752564364972,0.671130424230945,1.45072428402269,1.00828139742739,3.08711323243136,2.29226751951005,5.15672092277442,0.404632921719196,0,0,1.69422266034566,2.66788438833342,0.449949858640699,4.94433181283487,2.1314403448383,2.69640099466564,0.768436610643109,0.414758449233911,0.405017814995072,0.210324961351382,0.285650984403804,1.10434270475807,0.122490799214954,0.287536413054709,0,2.20231761998777,1.40456071893706,0.921639199537461,0.131886287730194,0.182975287204819,1.04182674111352,1.11673199600552,0.56276261003168,0.916789486660861,0.294628585473668,1.28134512719193,0.372798891650601,2.57469057332826,3.17400552448499,8.69593466105033,0.860423876981386,1.3599426674155,4.31762553310254,4.54843492213368,4.03224198387602,2.10666630197628,2.72688516124892,2.33807404142582,1.7666978725517,0.845060518660083,5.13305909657271,2.54805239706646,0,3.24736561516821,2.53359865475099,3.53867111510348,3.53970027129086,1.8125651855302,6.38301197978747,4.8575891494518,4.26251669636998,5.07354093963329,6.17962826265753,6.58496759959947,4.52399728786832,13.8429181931249,7.08536848907567,5.30766331169925,3.88240439873782,4.19598885074748,3.87900202508178,1.86391761218122,0.878342391034642,0.83778682725382,2.29911349687732,1.91704199209472,0.599902730993408,3.43089613097275,0.299581278809645,0.915001205637253,0.125654352112864,0.869121600961382,0.255715457330331,1.66230435647648,1.62241263067758,2.03678727700633,3.85661608891288,6.31806896084187,5.26104639716185,1.56144531555244,1.37941262660084,2.16074555766419,1.35634336052144,2.31324097114515,2.3060469651273,2.90475346135159,3.10444044886819,1.29340795759705,1.89106080167819,4.04687585577082,5.04150184583422,5.56094498451196,10.7958171621872,6.1734640922383,3.58261680273288,1.40442637462647,3.08817488537658,1.98914449576915,1.65700618028402,2.34526059981096,1.44049649168812,3.07768156260773,3.14822770795846,3.5481435964097,3.48800917125612,4.02410102099429,2.6856028744449,3.78487654801005,4.26835406605648,4.86412857275134,2.33919979880532,3.29325172936576,3.22095405024892,1.89260953707715,0.102904612379284,1.98251269790279,4.23120906661671,2.98603550749328,4.64473343720877,3.8660238396628,3.22693639397348,3.55804870151792,4.1849637744763,5.21981967698963,5.43506550589236,3.77002813200404,3.97912944082302,4.874102177978,0,1.94524244887225,1.1948476395262,3.79335801906163,3.77020091612105,5.63538678365402,4.88763186828754,5.23671715352589,3.99774173374816,5.75452487830741,5.16635517928608,4.39596437955849,1.97435462274881,7.41131567717872,1.50160595144485,0.786235980452812,2.02375901146368,1.42002084971952,1.20588579876208,1.78238096246994,4.02774592431135,3.40483976227574,2.47105271869273,2.87536413054709,6.32639611036456,4.36852742360385,4.04126204715379,2.87035861635059,1.4473305640901,5.54259570499814,3.60033682363921,5.0519142697028,5.94107800213158,7.97946844180907,14.573044397438,12.6163129669587,11.5128852236101,11.9802709520705,9.7444463445461,10.5240147313941,7.53771247692395,6.21665934717224,6.65385669474953,1.50791283939272,1.08781136763742,7.86822836830458,16.0043312856745,0.481651769963376,0.35163505977661,0.163934945376675,2.52470927204373,0.315508219416257,2.73307121007647,2.80050417052639,3.82350076724083,2.67358408898873,3.67999490025482,2.02405350837447,1.16902343164525,1.18586333383957,2.57057053137446,5.25178315270594,3.5613120733451,3.25773918707152,5.93892442701128,1.32745138339963,5.34117399540959,2.41858845571801,3.39489143560617,4.42952839321159,4.91896236710284,3.10113951801865,4.36240475373007,3.92147116223193,0.948110273807448,4.21674434299995,1.03135543248187,2.7235168460303,1.08036656418786,0.905510786479282,1.50035924522115,1.95074257006501,3.21063871683727,1.15184314421485,1.522324745573,4.22409074514679,5.71946591332314,1.32317038832977,10.3878339353132,6.78150592122803,9.52944213864862,6.80422360817878,7.2221995887827,5.53813589596716,0.370850604021019,1.53783792718067,7.22354037871279,7.40778109478847,2.26042148405629,1.6403307326523,2.28778173206523,3.39956859987711,1.6794174278839,3.04039942369732,0.954670618015114,2.37251995185852,4.26970880966382,3.67218158794124,3.55450103224597,4.36725127492355,5.93403124093211,3.30613822901344,1.57053565190418,4.01806417204558,8.07741107013003,2.25477175473676,6.57872802593507,4.46737924234164,3.50012139019286,5.55387240954244,6.42033276864957,6.45464812551647,4.81756223922615,8.59846624290829,3.14059357073808,3.16833006883652,3.79213344753814,2.02725215290164,2.77319584345034,1.94881234466693,1.9692936523423,2.78153896693771,3.4856680360791,2.06765338044408,2.52416124870369,1.295515713135,2.72230699869469,2.82627854145282,3.65604998233252,3.85693777199178,3.17422537061296,3.55177525398503,1.88399098879899,2.68615386182526,4.82973985080476,3.94133198447482,6.59345847362154,8.1459984050045,1.50471631210609,1.12950368523413,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0,0,0.51776031175182,1.3492355185943,4.38927360741134,2.73173769206615,5.59145449257076,2.51535795153579,2.02227859295016,4.22268782823069,2.67845574410562,5.13470735346904,3.79045817645696,3.54871019846336,3.77252682772152,5.24392441831341,3.84150914429216,4.47996657853783,2.38146845641537,4.98302601562879,3.08654752741928,6.1812885120496,3.82717192349433,5.48590803816665,3.54951612318675,5.7224685587357,3.92435324907287,3.76437521661322,3.80765735512544,3.84148743032822,4.73525480588117,4.88894809845102,5.05028044491965,3.79632057997357,4.53120618927592,2.04615521584845,3.25367366490529,5.20847849649082,2.74791635731741,4.44470056046276,5.37177635120746,3.63447830930802,3.08827986767322,3.94175320554716
|short_description=p3@Rreb1
|short_description=p3@Rreb1
}}
}}

Revision as of 02:16, 18 April 2012

Short description:p3@Rreb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rreb1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000124373, ENSMUST00000149745, NM_001177868, NR_033615, uc007qcx.2, uc007qcy.2_5end
EntrezGene:Rreb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rreb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.48
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D92.57
Mouse Schwann, donor2.CNhs12573.11746-123F93.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D76.38
adrenal gland, embryo E14.CNhs11038.406-44C54.86
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I15.07
adrenal gland, embryo E18.CNhs11026.1262-18F56.18
adrenal gland, neonate N00.CNhs11191.1311-23C16.58
adrenal gland, neonate N25.CNhs11223.1377-27I34.52
amnion, adult pregnant day17.5.CNhs10488.583-22A813.84
aorta, adult.CNhs10498.46-23H17.09
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.92
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.43
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B26.32
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B56.17
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E32.69
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G14.86
heart, neonate N20.CNhs11127.821-26I62.34
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D83.87
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E95.44
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F83.77
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C75.24
kidney, neonate N00.CNhs11214.646-21G74.00
kidney, neonate N10.CNhs11206.758-6D55.75
kidney, neonate N20.CNhs11113.832-19I15.17
kidney, neonate N25.CNhs11122.1353-25F34.40
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F43.40
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B15.54
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F85.05
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B67.98
lung, embryo E17.CNhs10605.480-44A614.57
lung, embryo E18.CNhs10583.1287-20I612.62
lung, neonate N00.CNhs11224.640-42C611.51
lung, neonate N06.CNhs11212.683-20E511.98
lung, neonate N07.CNhs11111.715-19A39.74
lung, neonate N10.CNhs11219.750-23E610.52
lung, neonate N20.CNhs11109.822-18A47.54
lung, neonate N25.CNhs11119.1359-25C76.22
lung, neonate N30.CNhs11133.1394-42H26.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H216.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G65.94
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G35.72
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C310.39
skin, neonate N00.CNhs11124.650-25G46.78
skin, neonate N03.CNhs11215.662-22H39.53
skin, neonate N06.CNhs11097.693-20I56.80
skin, neonate N10.CNhs11108.762-6C47.22
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C17.22
spleen, embryo E18.CNhs11011.1271-21F27.41
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D43.67
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B85.93
stomach, neonate N07.CNhs11210.718-18A93.31
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F56.58
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I55.55
testis, embryo E18.CNhs11027.503-18G56.42
testis, neonate N00.CNhs11189.1300-22B76.45
testis, neonate N07.CNhs11222.726-26I44.82
testis, neonate N10.CNhs11204.763-44D98.60
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A22.83
thymus, neonate N25.CNhs11125.1362-25G73.66
thymus, neonate N30.CNhs11132.1393-42G23.86
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D58.15
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:37918773..37918818,%2B&oldid=804159"