Personal tools

FFCP PHASE1:Mm9::chr1:193541759..193541783,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr1:193541759..193541783,+
|short_description=p5@Lpgat1
|description=CAGE_peak_5_at_Lpgat1_5end
|association_with_transcript=46bp_to_ENSMUST00000110855,ENSMUST00000133076_5end
|EntrezGene=226856
|EntrezGene=226856
|HGNC=
|HGNC=
|UniProt=Q91YX5,D3YUD1
|UniProt=Q91YX5,D3YUD1
|association_with_transcript=46bp_to_ENSMUST00000110855,ENSMUST00000133076_5end
|description=CAGE_peak_5_at_Lpgat1_5end
|id=chr1:193541759..193541783,+
|ontology_enrichment_disease=
|phase1_expression=0.80074423552397,0.697950815278722,0.909998478779072,0.30246421130683,1.50268718983904,0.33575854382378,0.467225281191051,0.516493293766305,0,0.234064526321993,0.171217968225505,0.638177271962691,1.19840510951844,0.874204024189974,0.333109761815663,0.404950534779652,0,1.10411757875383,1.7824876368746,1.27316895539409,1.36069264241712,0.496454756004426,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,2.09265815368454,0,0.523523743973798,2.35292595212406,3.41522742479223,0.971020706062307,1.88845226963366,1.62203089951223,1.10128051297009,0,1.30815093828268,1.97717564461025,1.36100929351998,1.1198913730029,1.43752564364972,1.00669563634642,0.725362142011344,1.00828139742739,0.771778308107841,2.29226751951005,1.54701627683233,1.41621522601718,2.64495489636016,1.90149421051854,0.338844532069132,0.889294796111139,1.7997994345628,0,0,0.599200221036809,0.768436610643109,1.76272340924412,1.4850653216486,0.841299845405528,1.71390590642282,0,1.10241719293459,0.862609239164127,0,4.40463523997555,3.06449611404451,2.76491759861238,0.923204014111357,1.00636407962651,1.04182674111352,1.95428099300967,3.37657566019008,1.37518422999129,0.589257170947335,1.28134512719193,1.67759501242771,0.227178579999552,0.755715601067855,1.15945795480671,2.58127163094416,1.3599426674155,0,0.649776417447669,0,1.12355536105401,1.02258193546835,1.03914401841148,1.41335829804136,0.563373679106722,1.28326477414318,0,0,0.432982082022428,0,0.505524445014783,0.5709193985953,1.03575153458869,1.03909497345377,0.173485326766136,0,0.461230994512117,1.20578112442098,1.88141931417128,0.879666139307728,0.741584903203122,1.15679485535929,2.65383165584962,2.10296904931632,1.32504911076236,1.45462575940567,0,3.22058876712702,2.72280718857492,0.766371165625774,1.43778149407104,0.599902730993408,0.254140454146129,2.54644086988199,1.83000241127451,1.38219787324151,3.12883776346098,2.55715457330331,2.0778804455956,2.43361894601636,1.52759045775474,1.24406970610093,1.26361379216837,0.420883711772948,0.260240885925407,1.14951052216736,0.720248519221397,0.452114453507145,1.42876648217788,0.896796041993948,1.21812241927647,1.81092359517311,1.94011193639558,1.32374256117473,2.11141348996739,1.09597866213787,0,2.43776516565517,1.02891068203972,0.59710280045548,0,0,0,0.828503090142008,0.469052119962192,1.08037236876609,0.710234206755631,0.787056926989615,1.3884040159864,0,1.07309360559848,1.5179494507732,1.48103864922132,1.31333971263276,2.26992666728396,2.19299981137998,1.97595103761946,0.805238512562231,2.73376933133365,1.44066457330998,0.330418782983798,0,0.639864751605702,0.696710015581316,1.41754207454303,0.80673409849337,0,0.190225626112559,0.949058123089023,0.823494773620054,0.754005626400808,1.39269530428806,0.974820435595601,1.79763881730844,0,0,0.379335801906163,0.342745537829186,0,0.814605311381257,1.35766741017338,1.40271639780637,0.885311519739602,0.738050739898011,0.627994911365499,0.616985819609003,1.48226313543574,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0,1.15078454980324,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0.757736633841335,0.538192240565737,0,2.03228509183265,1.32643988239339,0.977789858652155,1.18821560042632,0.704070744865506,0.670025029767263,0.238043640886014,1.75620283072019,2.04925687338048,1.10732344824387,1.91345722388985,0.655453258862952,1.55416483679306,2.31438493730419,0,2.17562273527484,1.96705709207614,3.86311444826625,4.17431533968259,2.57865710502847,2.29508923527346,1.00988370881749,0,1.17131623288992,0.430846795465598,0.238968797952552,0.222798674082394,2.83076530788832,0,1.16902343164525,0,1.92792789853084,1.27746076687442,0.890328018336276,1.46598263418218,1.64970122972535,2.65490276679926,0.485561272309963,0.604647113929502,0.943025398779491,0.590603785761546,0.307435147943927,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,1.03135543248187,0.680879211507576,0.36012218806262,0.258717367565509,0,1.06404140185364,0.891844088010353,0.658196082408484,1.2178597964584,0.704015124191131,0.63549621259146,0.441056796109924,1.15420377059036,2.26050197374268,1.68876189798836,0.596861720015682,1.14898629821543,0.291480836629851,3.33765543618917,0.683483523191411,0.412773735926445,0.925972636848558,0.376736914009382,0.683471138605126,0.228778173206523,0.849892149969277,0.69975726161829,0.414599921413271,0,0.790839983952838,0.609958401380546,0.432021363287205,0.836353184057875,0.436725127492355,0.404593039154462,0.826534557253359,0,0.388844919875379,1.24267862617385,19.7292528539467,0.448549638131936,0.496375471371293,0.777804753376191,1.16243841129958,0.844780627453891,1.17357238645754,1.0416350787516,1.46803082195995,6.03960302065015,8.92893019399383,0,0.810900861160657,0.205421914329655,0.77952493786677,1.07416017400489,1.39076948346885,0.360586348559907,1.03382669022204,0.201932899896295,0.762068066549998,0.403304740547362,0.194915761479505,0.288635524920988,0.116876902181569,1.58711268530648,0,0.0897138566094757,0.167884616364078,0.772758376128762,1.12609485270709,2.01466786693992,0.643105137237198,0.501572104035363,2.82375921308533,1.38097570952153,1.14579102687879,2.40594455281163,4.11049511862385,1.5107877947794,8.10027000278167,2.2516060161211,4.98456649882625,3.62432218226274,0.415149390336707,0.399024873401031,1.02440163452481,0.972426868273176,1.04806581313991,1.10306105070008,2.00022055021454,1.44224540067226,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,1.31098110457835,1.21647789569252,0.918967503289812,0.952587382566147,0.463537303779422,0.964546102318525,0.824171801606613,1.32479028120958,0.685738504770831,1.06485483695602,0.953744759789284,0.872078499793971,1.59985946706062,0.930760686808441,1.46342378298218,1.05227884575137,0.271608227691724,1.68342681497322,0.949080144993393,1.28055827088233,0.409231043169689,0.929621047115796,1.15743966588685,0.999242311751784,1.63752125911786,1.93383948643468,1.72159498861959,1.76473135295612,2.08681052058379
|phase1_expression=0.80074423552397,0.697950815278722,0.909998478779072,0.30246421130683,1.50268718983904,0.33575854382378,0.467225281191051,0.516493293766305,0,0.234064526321993,0.171217968225505,0.638177271962691,1.19840510951844,0.874204024189974,0.333109761815663,0.404950534779652,0,1.10411757875383,1.7824876368746,1.27316895539409,1.36069264241712,0.496454756004426,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,2.09265815368454,0,0.523523743973798,2.35292595212406,3.41522742479223,0.971020706062307,1.88845226963366,1.62203089951223,1.10128051297009,0,1.30815093828268,1.97717564461025,1.36100929351998,1.1198913730029,1.43752564364972,1.00669563634642,0.725362142011344,1.00828139742739,0.771778308107841,2.29226751951005,1.54701627683233,1.41621522601718,2.64495489636016,1.90149421051854,0.338844532069132,0.889294796111139,1.7997994345628,0,0,0.599200221036809,0.768436610643109,1.76272340924412,1.4850653216486,0.841299845405528,1.71390590642282,0,1.10241719293459,0.862609239164127,0,4.40463523997555,3.06449611404451,2.76491759861238,0.923204014111357,1.00636407962651,1.04182674111352,1.95428099300967,3.37657566019008,1.37518422999129,0.589257170947335,1.28134512719193,1.67759501242771,0.227178579999552,0.755715601067855,1.15945795480671,2.58127163094416,1.3599426674155,0,0.649776417447669,0,1.12355536105401,1.02258193546835,1.03914401841148,1.41335829804136,0.563373679106722,1.28326477414318,0,0,0.432982082022428,0,0.505524445014783,0.5709193985953,1.03575153458869,1.03909497345377,0.173485326766136,0,0.461230994512117,1.20578112442098,1.88141931417128,0.879666139307728,0.741584903203122,1.15679485535929,2.65383165584962,2.10296904931632,1.32504911076236,1.45462575940567,0,3.22058876712702,2.72280718857492,0.766371165625774,1.43778149407104,0.599902730993408,0.254140454146129,2.54644086988199,1.83000241127451,1.38219787324151,3.12883776346098,2.55715457330331,2.0778804455956,2.43361894601636,1.52759045775474,1.24406970610093,1.26361379216837,0.420883711772948,0.260240885925407,1.14951052216736,0.720248519221397,0.452114453507145,1.42876648217788,0.896796041993948,1.21812241927647,1.81092359517311,1.94011193639558,1.32374256117473,2.11141348996739,1.09597866213787,0,2.43776516565517,1.02891068203972,0.59710280045548,0,0,0,0.828503090142008,0.469052119962192,1.08037236876609,0.710234206755631,0.787056926989615,1.3884040159864,0,1.07309360559848,1.5179494507732,1.48103864922132,1.31333971263276,2.26992666728396,2.19299981137998,1.97595103761946,0.805238512562231,2.73376933133365,1.44066457330998,0.330418782983798,0,0.639864751605702,0.696710015581316,1.41754207454303,0.80673409849337,0,0.190225626112559,0.949058123089023,0.823494773620054,0.754005626400808,1.39269530428806,0.974820435595601,1.79763881730844,0,0,0.379335801906163,0.342745537829186,0,0.814605311381257,1.35766741017338,1.40271639780637,0.885311519739602,0.738050739898011,0.627994911365499,0.616985819609003,1.48226313543574,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0,1.15078454980324,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0.757736633841335,0.538192240565737,0,2.03228509183265,1.32643988239339,0.977789858652155,1.18821560042632,0.704070744865506,0.670025029767263,0.238043640886014,1.75620283072019,2.04925687338048,1.10732344824387,1.91345722388985,0.655453258862952,1.55416483679306,2.31438493730419,0,2.17562273527484,1.96705709207614,3.86311444826625,4.17431533968259,2.57865710502847,2.29508923527346,1.00988370881749,0,1.17131623288992,0.430846795465598,0.238968797952552,0.222798674082394,2.83076530788832,0,1.16902343164525,0,1.92792789853084,1.27746076687442,0.890328018336276,1.46598263418218,1.64970122972535,2.65490276679926,0.485561272309963,0.604647113929502,0.943025398779491,0.590603785761546,0.307435147943927,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,1.03135543248187,0.680879211507576,0.36012218806262,0.258717367565509,0,1.06404140185364,0.891844088010353,0.658196082408484,1.2178597964584,0.704015124191131,0.63549621259146,0.441056796109924,1.15420377059036,2.26050197374268,1.68876189798836,0.596861720015682,1.14898629821543,0.291480836629851,3.33765543618917,0.683483523191411,0.412773735926445,0.925972636848558,0.376736914009382,0.683471138605126,0.228778173206523,0.849892149969277,0.69975726161829,0.414599921413271,0,0.790839983952838,0.609958401380546,0.432021363287205,0.836353184057875,0.436725127492355,0.404593039154462,0.826534557253359,0,0.388844919875379,1.24267862617385,19.7292528539467,0.448549638131936,0.496375471371293,0.777804753376191,1.16243841129958,0.844780627453891,1.17357238645754,1.0416350787516,1.46803082195995,6.03960302065015,8.92893019399383,0,0.810900861160657,0.205421914329655,0.77952493786677,1.07416017400489,1.39076948346885,0.360586348559907,1.03382669022204,0.201932899896295,0.762068066549998,0.403304740547362,0.194915761479505,0.288635524920988,0.116876902181569,1.58711268530648,0,0.0897138566094757,0.167884616364078,0.772758376128762,1.12609485270709,2.01466786693992,0.643105137237198,0.501572104035363,2.82375921308533,1.38097570952153,1.14579102687879,2.40594455281163,4.11049511862385,1.5107877947794,8.10027000278167,2.2516060161211,4.98456649882625,3.62432218226274,0.415149390336707,0.399024873401031,1.02440163452481,0.972426868273176,1.04806581313991,1.10306105070008,2.00022055021454,1.44224540067226,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,1.31098110457835,1.21647789569252,0.918967503289812,0.952587382566147,0.463537303779422,0.964546102318525,0.824171801606613,1.32479028120958,0.685738504770831,1.06485483695602,0.953744759789284,0.872078499793971,1.59985946706062,0.930760686808441,1.46342378298218,1.05227884575137,0.271608227691724,1.68342681497322,0.949080144993393,1.28055827088233,0.409231043169689,0.929621047115796,1.15743966588685,0.999242311751784,1.63752125911786,1.93383948643468,1.72159498861959,1.76473135295612,2.08681052058379
|short_description=p5@Lpgat1
}}
}}

Revision as of 06:55, 18 April 2012

Short description:p5@Lpgat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Lpgat1_5end
Coexpression cluster:NA
Association with transcript: 46bp_to_ENSMUST00000110855, ENSMUST00000133076_5end
EntrezGene:Lpgat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Lpgat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G519.73
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H36.04
testis, neonate N30.CNhs11130.1391-42E28.93
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:193541759..193541783,%2B&oldid=839615"