Personal tools

FFCP PHASE1:Mm9::chr2:73730676..73730692,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:73730676..73730692,-
|short_description=p1@Atf2,p1@LOC100047997
|description=CAGE_peak_1_at_Atf2_5end,CAGE_peak_1_at_LOC100047997_5end
|association_with_transcript=0bp_to_ENSMUST00000100009,ENSMUST00000112007,ENSMUST00000125159,ENSMUST00000141050,ENSMUST00000156455,ENSMUST00000165933,NM_001025093,NM_009715,uc008kde.1,uc008kdf.1,uc008kdg.1,uc008kdh.1,uc008kdi.1,uc008kdj.1,uc008kdk.1,uc008kdl.1_5end
|EntrezGene=100047997,11909
|EntrezGene=100047997,11909
|HGNC=
|HGNC=
|UniProt=P16951,A2AQF2,Q543G2,Q640L6,Q68FE3,Q8CBR9,Q8BN75
|UniProt=P16951,A2AQF2,Q543G2,Q640L6,Q68FE3,Q8CBR9,Q8BN75
|association_with_transcript=0bp_to_ENSMUST00000100009,ENSMUST00000112007,ENSMUST00000125159,ENSMUST00000141050,ENSMUST00000156455,ENSMUST00000165933,NM_001025093,NM_009715,uc008kde.1,uc008kdf.1,uc008kdg.1,uc008kdh.1,uc008kdi.1,uc008kdj.1,uc008kdk.1,uc008kdl.1_5end
|description=CAGE_peak_1_at_Atf2_5end,CAGE_peak_1_at_LOC100047997_5end
|id=chr2:73730676..73730692,-
|ontology_enrichment_disease=
|phase1_expression=20.6592012765184,14.3079917132138,11.3749809847384,13.3084252975005,8.5152274090879,11.2479112180966,10.9797941079897,25.5664180414321,27.1722233752717,19.4273556847255,17.977886663678,17.78919145596,27.5633175189241,25.9638595184422,12.9912807108108,16.4004966585759,21.6864182219725,21.4514272443602,24.13214031461,24.6145998042858,18.5394372529332,17.7730802649585,18.2839852397255,8.95957567643077,9.86459908588831,6.89078356938024,6.03066794622705,8.83432054012145,11.7814520062952,11.3413558391969,10.4213340007993,5.71527606113668,7.99584223859941,0,10.1098066912946,11.137721239019,11.2293145944303,27.6230876286359,25.0027310247616,30.3643771504803,29.4115744015507,38.9335926426314,33.0147040061184,12.5896817975577,14.192770370732,13.2153661556411,8.60630478782843,2.18025156380447,3.07560655828261,5.24960727500565,3.21968769738334,2.87505128729943,21.643956181448,21.7608642603403,22.1821907434026,11.0621557495457,12.6074713573053,15.9858348606007,15.578367486189,20.6306481916093,18.3811107016792,6.77689064138264,4.4464739805557,5.39939830368839,9.88866362566974,7.104801149461,3.89480143673926,3.84218305321555,23.3301627694075,16.2007125998029,22.0841209418951,11.7116903605559,10.8225585066291,23.7632150477011,17.7314121383737,14.7075005857603,29.731287869835,25.154405602782,23.0409799884365,20.0467157349895,21.7740591773735,21.8783615633839,17.8677119360884,28.138130501584,26.7396933609418,22.3917724959987,26.9082476710305,23.8591290656385,13.3278100266404,14.81202578093,17.102004833399,8.60423876981386,4.75979933595425,12.4131734076698,11.695975514058,9.85659151614138,13.2017754923847,12.6118438707763,11.1707981979234,10.2468476607999,13.239281459008,17.9657068380045,15.2883143823987,0,6.71122227134764,7.34743609877786,5.56076889516262,12.7885945285347,55.6716449841419,20.1881309128162,14.9197381018877,14.0054120023585,15.681853813412,15.2229866958149,19.8724915059341,16.3366568728578,23.2363269670311,26.8954803871036,22.9998743506967,17.6325866442676,15.9005893291483,15.0311328471919,9.31958806090611,29.2780797011547,31.2075593152048,16.0937944781413,13.2994788201571,8.39863823390771,12.7070227073065,33.5531032266803,36.1425476226715,39.4554665634394,47.4540394124915,44.2387741181472,35.9473317088039,34.3951477703646,23.1175355940218,17.1681619441928,19.2069296409593,21.4650693004203,27.7156543510559,18.3921683546778,28.0896922496345,22.4550178575215,21.5675702309709,27.1601087003882,21.3639931996182,18.3679393224701,18.5388473922244,26.0966390631591,25.8648152521005,21.2619860454748,20.8535436919198,17.4126083261083,18.7261744131229,24.8792833523116,11.937624184325,10.5512641917033,10.7982129770325,13.6703009873431,17.5894544985822,15.1252131627252,16.5721314909647,15.7411385397923,21.9059300300077,17.9051137457814,13.1453966685813,14.5956677958962,14.1521470925593,18.879258369096,18.8890326241844,14.6199987425332,13.3925570327541,14.7627060636409,45.8432087869797,35.5020912708531,16.8513579321737,15.6025834331491,26.8743195674395,25.7782705765087,19.7167215822803,14.9245808221273,21.1259141652627,17.3105319762429,10.9141684155238,15.646400698781,16.0854533632172,12.3353012665514,20.2762650603885,16.178749355776,13.6166971421057,18.1218558661474,15.9321036800589,26.3914064128474,22.5415471346161,21.5870407516033,23.0803459729475,18.0950415317022,20.0459822683896,25.3889454524916,22.4508180813166,15.3012483263033,11.2651998293117,14.0149888801519,13.1694526725846,11.4679677316275,17.6488305607998,13.2647437863829,14.0044218479781,18.4125527968519,13.781494275878,17.0228076176611,17.2521847832825,12.6527922207291,15.9139213288426,14.1444171650383,11.4814344654024,14.9557491622644,26.0501998134913,16.8647356475731,25.9114312542821,22.5760964081,20.6527418493882,20.1007508930179,18.091316707337,17.1717610114863,19.3891227250615,22.1464689648775,23.7587605299656,22.7770007454876,20.5495128420416,18.8043776155965,7.53956419696361,8.70249094109935,14.7529281905711,16.8321415245887,28.578005017827,25.2005126173237,17.0492343191742,8.33154059774431,14.8288863125641,18.7410597262386,15.9413314322271,17.9226598464414,18.4922899488387,19.2492040936406,17.0020494703456,18.704374906324,24.903130010631,28.9189184779626,23.9878744001974,17.0942979520565,21.501078634672,24.2506080769627,19.9117707509944,15.5379607139188,12.6975893925195,16.4086419387631,12.993283286754,16.6014979889721,14.4719844174204,15.2684166380552,18.5378636760055,20.2263525078922,13.7044191147498,15.470331487228,33.0226417581174,27.0091641046965,12.0303575917962,22.7197257133488,21.8128487379996,20.155676389034,20.0749805134588,11.2652031172402,20.8857820176702,16.7347335982418,22.2733682035512,20.940554123568,19.5371956302046,20.2048298509322,16.7121281604391,12.6388492803697,20.4036585640896,24.4761398653873,22.2132145037208,17.7492706448371,21.2973706475168,16.9531611304222,24.0581840789004,15.7856939512501,13.2583175395207,15.6745626602497,18.1041965683795,7.63736494412091,21.9853515538889,22.5684608510802,23.4371589583309,19.2361232333311,17.250642535948,17.9369580691812,14.1337409290324,18.3229159388821,12.9614973291793,18.0188400795208,8.45539408026285,27.0624948339602,18.5313509311949,22.1674354712214,18.9864940512265,22.4711646902735,21.7110891494645,24.0878111961308,23.3836338069335,16.4277202161684,10.3690802252832,24.9648785296261,12.9744137785705,16.4337531463724,14.8109738194686,17.5446161754132,17.28527786597,18.3899037765552,24.2210824566307,25.2416124870369,20.956871830125,25.2065462842101,31.1865218367208,25.3037143514066,28.4010872301213,12.923631866067,10.433339808581,17.4044881822383,12.2555769945777,19.1257698091869,16.7037403151552,18.1320108024592,16.7207335681671,20.0628841614145,46.3096510945995,32.2227665555024,41.2484769676366,32.1365450982696,43.8452812653211,43.0574521512129,31.7260575108949,43.2308355095252,38.0639623546732,38.8320233813865,25.2203254629549,22.7444177838588,23.5612375940705,15.0726164582342,19.9132504496583,18.5681943534514,18.4464784075341,22.6638562962784,13.1576875932644,17.9415020352296,16.4761544928656,23.2010399904874,20.6011316433741,18.9514451118413,25.5013482162923,18.0991602687568,19.3526824327909,21.7987419123987,25.9614117506083,18.9886606973373,24.0008476669791,21.6520483514392,20.5055123354696,19.040380578835,22.3980325388487,19.1229013835189,23.5977085005877,18.6779495120868,20.5064211907251,15.7119836064167,21.9474783529722,20.7844457812439,19.6430900721451,21.0714104012914,18.9048478761519,16.2376875659665,15.9073493742878,17.8342974860088,13.390183244819,11.9119366324538,13.9120701372253
|phase1_expression=20.6592012765184,14.3079917132138,11.3749809847384,13.3084252975005,8.5152274090879,11.2479112180966,10.9797941079897,25.5664180414321,27.1722233752717,19.4273556847255,17.977886663678,17.78919145596,27.5633175189241,25.9638595184422,12.9912807108108,16.4004966585759,21.6864182219725,21.4514272443602,24.13214031461,24.6145998042858,18.5394372529332,17.7730802649585,18.2839852397255,8.95957567643077,9.86459908588831,6.89078356938024,6.03066794622705,8.83432054012145,11.7814520062952,11.3413558391969,10.4213340007993,5.71527606113668,7.99584223859941,0,10.1098066912946,11.137721239019,11.2293145944303,27.6230876286359,25.0027310247616,30.3643771504803,29.4115744015507,38.9335926426314,33.0147040061184,12.5896817975577,14.192770370732,13.2153661556411,8.60630478782843,2.18025156380447,3.07560655828261,5.24960727500565,3.21968769738334,2.87505128729943,21.643956181448,21.7608642603403,22.1821907434026,11.0621557495457,12.6074713573053,15.9858348606007,15.578367486189,20.6306481916093,18.3811107016792,6.77689064138264,4.4464739805557,5.39939830368839,9.88866362566974,7.104801149461,3.89480143673926,3.84218305321555,23.3301627694075,16.2007125998029,22.0841209418951,11.7116903605559,10.8225585066291,23.7632150477011,17.7314121383737,14.7075005857603,29.731287869835,25.154405602782,23.0409799884365,20.0467157349895,21.7740591773735,21.8783615633839,17.8677119360884,28.138130501584,26.7396933609418,22.3917724959987,26.9082476710305,23.8591290656385,13.3278100266404,14.81202578093,17.102004833399,8.60423876981386,4.75979933595425,12.4131734076698,11.695975514058,9.85659151614138,13.2017754923847,12.6118438707763,11.1707981979234,10.2468476607999,13.239281459008,17.9657068380045,15.2883143823987,0,6.71122227134764,7.34743609877786,5.56076889516262,12.7885945285347,55.6716449841419,20.1881309128162,14.9197381018877,14.0054120023585,15.681853813412,15.2229866958149,19.8724915059341,16.3366568728578,23.2363269670311,26.8954803871036,22.9998743506967,17.6325866442676,15.9005893291483,15.0311328471919,9.31958806090611,29.2780797011547,31.2075593152048,16.0937944781413,13.2994788201571,8.39863823390771,12.7070227073065,33.5531032266803,36.1425476226715,39.4554665634394,47.4540394124915,44.2387741181472,35.9473317088039,34.3951477703646,23.1175355940218,17.1681619441928,19.2069296409593,21.4650693004203,27.7156543510559,18.3921683546778,28.0896922496345,22.4550178575215,21.5675702309709,27.1601087003882,21.3639931996182,18.3679393224701,18.5388473922244,26.0966390631591,25.8648152521005,21.2619860454748,20.8535436919198,17.4126083261083,18.7261744131229,24.8792833523116,11.937624184325,10.5512641917033,10.7982129770325,13.6703009873431,17.5894544985822,15.1252131627252,16.5721314909647,15.7411385397923,21.9059300300077,17.9051137457814,13.1453966685813,14.5956677958962,14.1521470925593,18.879258369096,18.8890326241844,14.6199987425332,13.3925570327541,14.7627060636409,45.8432087869797,35.5020912708531,16.8513579321737,15.6025834331491,26.8743195674395,25.7782705765087,19.7167215822803,14.9245808221273,21.1259141652627,17.3105319762429,10.9141684155238,15.646400698781,16.0854533632172,12.3353012665514,20.2762650603885,16.178749355776,13.6166971421057,18.1218558661474,15.9321036800589,26.3914064128474,22.5415471346161,21.5870407516033,23.0803459729475,18.0950415317022,20.0459822683896,25.3889454524916,22.4508180813166,15.3012483263033,11.2651998293117,14.0149888801519,13.1694526725846,11.4679677316275,17.6488305607998,13.2647437863829,14.0044218479781,18.4125527968519,13.781494275878,17.0228076176611,17.2521847832825,12.6527922207291,15.9139213288426,14.1444171650383,11.4814344654024,14.9557491622644,26.0501998134913,16.8647356475731,25.9114312542821,22.5760964081,20.6527418493882,20.1007508930179,18.091316707337,17.1717610114863,19.3891227250615,22.1464689648775,23.7587605299656,22.7770007454876,20.5495128420416,18.8043776155965,7.53956419696361,8.70249094109935,14.7529281905711,16.8321415245887,28.578005017827,25.2005126173237,17.0492343191742,8.33154059774431,14.8288863125641,18.7410597262386,15.9413314322271,17.9226598464414,18.4922899488387,19.2492040936406,17.0020494703456,18.704374906324,24.903130010631,28.9189184779626,23.9878744001974,17.0942979520565,21.501078634672,24.2506080769627,19.9117707509944,15.5379607139188,12.6975893925195,16.4086419387631,12.993283286754,16.6014979889721,14.4719844174204,15.2684166380552,18.5378636760055,20.2263525078922,13.7044191147498,15.470331487228,33.0226417581174,27.0091641046965,12.0303575917962,22.7197257133488,21.8128487379996,20.155676389034,20.0749805134588,11.2652031172402,20.8857820176702,16.7347335982418,22.2733682035512,20.940554123568,19.5371956302046,20.2048298509322,16.7121281604391,12.6388492803697,20.4036585640896,24.4761398653873,22.2132145037208,17.7492706448371,21.2973706475168,16.9531611304222,24.0581840789004,15.7856939512501,13.2583175395207,15.6745626602497,18.1041965683795,7.63736494412091,21.9853515538889,22.5684608510802,23.4371589583309,19.2361232333311,17.250642535948,17.9369580691812,14.1337409290324,18.3229159388821,12.9614973291793,18.0188400795208,8.45539408026285,27.0624948339602,18.5313509311949,22.1674354712214,18.9864940512265,22.4711646902735,21.7110891494645,24.0878111961308,23.3836338069335,16.4277202161684,10.3690802252832,24.9648785296261,12.9744137785705,16.4337531463724,14.8109738194686,17.5446161754132,17.28527786597,18.3899037765552,24.2210824566307,25.2416124870369,20.956871830125,25.2065462842101,31.1865218367208,25.3037143514066,28.4010872301213,12.923631866067,10.433339808581,17.4044881822383,12.2555769945777,19.1257698091869,16.7037403151552,18.1320108024592,16.7207335681671,20.0628841614145,46.3096510945995,32.2227665555024,41.2484769676366,32.1365450982696,43.8452812653211,43.0574521512129,31.7260575108949,43.2308355095252,38.0639623546732,38.8320233813865,25.2203254629549,22.7444177838588,23.5612375940705,15.0726164582342,19.9132504496583,18.5681943534514,18.4464784075341,22.6638562962784,13.1576875932644,17.9415020352296,16.4761544928656,23.2010399904874,20.6011316433741,18.9514451118413,25.5013482162923,18.0991602687568,19.3526824327909,21.7987419123987,25.9614117506083,18.9886606973373,24.0008476669791,21.6520483514392,20.5055123354696,19.040380578835,22.3980325388487,19.1229013835189,23.5977085005877,18.6779495120868,20.5064211907251,15.7119836064167,21.9474783529722,20.7844457812439,19.6430900721451,21.0714104012914,18.9048478761519,16.2376875659665,15.9073493742878,17.8342974860088,13.390183244819,11.9119366324538,13.9120701372253
|short_description=p1@Atf2,p1@LOC100047997
}}
}}

Revision as of 10:45, 18 April 2012

Short description:p1@Atf2, p1@LOC100047997
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Atf2_5end, CAGE_peak_1_at_LOC100047997_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000100009, ENSMUST00000112007, ENSMUST00000125159, ENSMUST00000141050, ENSMUST00000156455, ENSMUST00000165933, NM_001025093, NM_009715, uc008kde.1, uc008kdf.1, uc008kdg.1, uc008kdh.1, uc008kdi.1, uc008kdj.1, uc008kdk.1, uc008kdl.1_5end
EntrezGene:100047997,11909
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Atf2p1@LOC100047997

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I514.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.31
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.98
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E925.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E727.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F219.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F117.79
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E427.56
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A521.69
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A221.45
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.13
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H217.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.28
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.86
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I28.83
Ileum epithelium, pool1.CNhs13199.10252-104B911.78
Ileum epithelium, pool2.CNhs13232.10253-104C111.34
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.11
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G827.62
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H330.36
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G929.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H238.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.19
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A221.64
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I921.76
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A122.18
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.99
Mouse Granule cells, donor1.CNhs12131.11713-123C315.58
Mouse Granule cells, donor2.CNhs12357.11731-123E320.63
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D523.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.20
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D922.08
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.04
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.05
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.88
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.87
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F626.91
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E123.86
Mouse Schwann, donor1.CNhs12507.11728-123D913.33
Mouse Schwann, donor2.CNhs12573.11746-123F914.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.41
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.79
accessory axillary lymph node, adult.CNhs10475.1063-29H955.67
adrenal gland, adult.CNhs10508.49-24D720.19
adrenal gland, embryo E14.CNhs11038.406-44C514.92
adrenal gland, embryo E16.CNhs11004.1254-43D614.01
adrenal gland, embryo E17.CNhs11043.1263-45I115.68
adrenal gland, embryo E18.CNhs11026.1262-18F515.22
adrenal gland, neonate N00.CNhs11191.1311-23C119.87
adrenal gland, neonate N25.CNhs11223.1377-27I316.34
amnion, adult pregnant day17.5.CNhs10488.583-22A823.24
aorta, adult.CNhs10498.46-23H126.90
bone (os femoris), adult.CNhs10483.56-12G223.00
bone (os femoris), neonate N02.CNhs11227.1985-43F517.63
bone (os femoris), neonate N16.CNhs11225.1525-43A615.90
bone (os femoris), neonate N20.CNhs11195.1350-25C315.03
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B229.28
cerebellum, neonate N30.CNhs11135.1395-42I231.21
colon, adult.CNhs10468.36-18H716.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.30
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.71
corpora quadrigemina, adult.CNhs10501.16-22A433.55
corpus striatum, adult.CNhs10487.19-21D836.14
corpus striatum, neonate N00.CNhs11226.630-43F139.46
cortex, adult.CNhs10473.12-14D547.45
cortex, neonate N30.CNhs11107.1392-42F244.24
diencephalon, adult.CNhs10482.20-12F235.95
diencephalon, neonate N30.CNhs11201.1388-42B234.40
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B123.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.17
epididymis, adult.CNhs10490.58-23B219.21
eyeball, adult.CNhs10484.31-12G421.47
eyeball, embryo E12.CNhs11016.345-16C627.72
eyeball, embryo E14.CNhs10521.399-16E218.39
eyeball, embryo E15.CNhs10593.426-16C928.09
eyeball, embryo E17.CNhs11023.1261-18D422.46
eyeball, neonate N00.CNhs11207.633-15C621.57
eyeball, neonate N01.CNhs11140.1532-43E727.16
eyeball, neonate N02.CNhs11205.1551-44G821.36
eyeball, neonate N16.CNhs11188.777-19A218.37
forelimb, embryo E11.CNhs10596.335-25E218.54
forelimb, embryo E12.CNhs10600.359-14H226.10
forelimb, embryo E13.CNhs10589.384-1E225.86
forelimb, embryo E14.CNhs10577.413-26A821.26
forelimb, embryo E15.CNhs11007.437-20E720.85
forelimb, embryo E17.CNhs10598.1517-43C417.41
forelimb, embryo E18.CNhs11008.1520-43B518.73
gonad, embryo E13.CNhs11044.1564-45I624.88
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.55
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.80
heart, embryo E11.CNhs10586.331-24E913.67
heart, embryo E12.CNhs11015.353-12F517.59
heart, embryo E13.CNhs11013.376-3I915.13
heart, embryo E14.CNhs10597.403-26D416.57
heart, embryo E15.CNhs11017.431-16C815.74
heart, embryo E16.CNhs11021.457-17C621.91
heart, embryo E17.CNhs11025.479-18E517.91
heart, embryo E18.CNhs11030.1283-20G313.15
heart, neonate N00.CNhs11213.639-21E314.60
heart, neonate N03.CNhs11221.1349-25I214.15
heart, neonate N10.CNhs11118.749-24G118.88
heart, neonate N16.CNhs11209.782-15G118.89
heart, neonate N20.CNhs11127.821-26I614.62
heart, neonate N25.CNhs11196.1351-25D313.39
heart, neonate N30.CNhs11202.1390-42D214.76
hippocampus, adult.CNhs10478.13-16E845.84
hippocampus, neonate N00.CNhs11228.627-43G135.50
intestinal mucosa, adult.CNhs10506.860-29I316.85
intestine, adult.CNhs10496.178-9A315.60
intestine, embryo E12.CNhs11019.1251-16I526.87
intestine, embryo E13.CNhs11010.381-16D525.78
intestine, embryo E15.CNhs10602.976-16D819.72
intestine, embryo E16.CNhs10585.463-22H414.92
intestine, embryo E17.CNhs10582.482-18D321.13
intestine, embryo E18.CNhs10526.1289-20F717.31
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E915.65
intestine, neonate N06.CNhs11102.688-20B816.09
intestine, neonate N07.CNhs11095.720-20F212.34
intestine, neonate N10.CNhs11098.755-23A520.28
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E313.62
intestine, neonate N30.CNhs11131.1384-42G118.12
kidney, embryo E14.CNhs10606.411-4I915.93
kidney, embryo E15.CNhs10997.434-16F826.39
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I221.59
kidney, embryo E18.CNhs11001.1288-20C723.08
kidney, neonate N00.CNhs11214.646-21G718.10
kidney, neonate N10.CNhs11206.758-6D520.05
kidney, neonate N20.CNhs11113.832-19I125.39
kidney, neonate N25.CNhs11122.1353-25F322.45
kidney, neonate N30.CNhs11203.1385-42H115.30
liver, adult pregnant day01.CNhs10466.508-5B211.27
liver, embryo E12.CNhs10601.355-15F814.01
liver, embryo E13.CNhs10524.378-3H613.17
liver, embryo E14.CNhs10594.409-16E111.47
liver, embryo E15.CNhs10520.433-16D717.65
liver, embryo E16.CNhs10523.462-17F513.26
liver, embryo E17.CNhs10510.481-18A314.00
liver, embryo E18.CNhs10579.499-43G418.41
liver, neonate N00.CNhs11117.641-24F413.78
liver, neonate N03.CNhs11123.1345-25G217.02
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H212.65
liver, neonate N10.CNhs11115.751-24B915.91
liver, neonate N20.CNhs11220.823-25A314.14
liver, neonate N25.CNhs11198.1368-26H111.48
liver, neonate N30.CNhs11106.1382-42D114.96
lung, adult.CNhs10474.28-22B126.05
lung, embryo E12.CNhs10522.354-16G216.86
lung, embryo E14.CNhs10604.404-26F825.91
lung, embryo E15.CNhs11020.432-17C522.58
lung, embryo E16.CNhs10998.458-17B620.65
lung, embryo E17.CNhs10605.480-44A620.10
lung, embryo E18.CNhs10583.1287-20I618.09
lung, neonate N00.CNhs11224.640-42C617.17
lung, neonate N06.CNhs11212.683-20E519.39
lung, neonate N07.CNhs11111.715-19A322.15
lung, neonate N10.CNhs11219.750-23E623.76
lung, neonate N20.CNhs11109.822-18A422.78
lung, neonate N25.CNhs11119.1359-25C720.55
lung, neonate N30.CNhs11133.1394-42H218.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B614.75
mammary gland, adult pregnant day19.CNhs10476.588-5H216.83
medulla oblongata, adult.CNhs10477.17-12C228.58
medulla oblongata, neonate N30.CNhs11200.1396-42A325.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.05
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.74
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.92
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D518.70
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.90
olfactory brain, adult.CNhs10489.18-22I928.92
ovary, adult.CNhs10507.91-2I723.99
ovary, embryo E18.CNhs11040.505-44H717.09
ovary, neonate N00.CNhs11217.1299-22I421.50
oviduct, adult pregnant day01.CNhs10500.988-6G624.25
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F415.54
pancreas, embryo E15.CNhs11042.1556-45F212.70
pancreas, embryo E16.CNhs11003.460-26E516.41
pancreas, embryo E17.CNhs10599.1558-45G312.99
pancreas, embryo E18.CNhs10580.1535-43I716.60
pancreas, neonate N00.CNhs11105.645-26G914.47
pancreas, neonate N01.CNhs11138.1531-43D715.27
pancreas, neonate N02.CNhs11139.1539-43D818.54
pancreas, neonate N16.CNhs11136.787-43B620.23
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G833.02
pituitary gland, embryo E12.CNhs11018.346-16E627.01
pituitary gland, embryo E13.CNhs11009.370-44C712.03
pituitary gland, embryo E14.CNhs11037.398-44A522.72
pituitary gland, embryo E15.CNhs10592.427-16B921.81
pituitary gland, embryo E16.CNhs11036.449-43F620.16
pituitary gland, embryo E17.CNhs11039.1265-44F520.07
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I720.89
placenta, adult pregnant day17.CNhs10464.577-18G316.73
prostate, adult.CNhs10470.859-1F822.27
skin, adult.CNhs10492.30-1C320.94
skin, neonate N00.CNhs11124.650-25G419.54
skin, neonate N03.CNhs11215.662-22H320.20
skin, neonate N06.CNhs11097.693-20I516.71
skin, neonate N10.CNhs11108.762-6C412.64
small intestine, neonate N16.CNhs11114.790-21I120.40
spinal cord, adult.CNhs10505.24-13C924.48
spleen, adult.CNhs10465.25-2G222.21
spleen, embryo E16.CNhs11035.461-43C117.75
spleen, embryo E18.CNhs11011.1271-21F221.30
spleen, neonate N10.CNhs11116.752-24D116.95
spleen, neonate N20.CNhs11112.824-19H124.06
spleen, neonate N25.CNhs11099.1354-25G315.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D318.10
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E321.99
stomach, embryo E15.CNhs10603.1252-16G822.57
stomach, embryo E16.CNhs11022.459-17D423.44
stomach, embryo E17.CNhs11006.1035-18D519.24
stomach, embryo E18.CNhs10999.1286-20C617.25
stomach, neonate N03.CNhs11193.1340-24B817.94
stomach, neonate N07.CNhs11210.718-18A914.13
stomach, neonate N25.CNhs11104.1355-25E418.32
stomach, neonate N30.CNhs11134.1386-42I112.96
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F527.06
testis, embryo E15.CNhs11034.443-27C518.53
testis, embryo E16.CNhs11033.470-26G522.17
testis, embryo E17.CNhs11029.486-18I518.99
testis, embryo E18.CNhs11027.503-18G522.47
testis, neonate N00.CNhs11189.1300-22B721.71
testis, neonate N07.CNhs11222.726-26I424.09
testis, neonate N10.CNhs11204.763-44D923.38
testis, neonate N20.CNhs11110.839-18H316.43
testis, neonate N30.CNhs11130.1391-42E210.37
thymus, adult.CNhs10471.38-12B524.96
thymus, embryo E14.CNhs11041.402-44I412.97
thymus, embryo E15.CNhs11005.430-45I216.43
thymus, embryo E16.CNhs11002.456-26C514.81
thymus, embryo E17.CNhs10581.478-18C117.54
thymus, embryo E18.CNhs10595.1273-19G417.29
thymus, neonate N02.CNhs11181.1541-43F818.39
thymus, neonate N03.CNhs11137.2104-43C724.22
thymus, neonate N06.CNhs11197.681-26C425.24
thymus, neonate N07.CNhs11211.713-19D320.96
thymus, neonate N10.CNhs11194.748-24E425.21
thymus, neonate N20.CNhs11186.820-7A231.19
thymus, neonate N25.CNhs11125.1362-25G725.30
thymus, neonate N30.CNhs11132.1393-42G228.40
tongue, adult.CNhs10499.32-1B412.92
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H310.43
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F717.40
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.26
urinary bladder, adult.CNhs10481.879-12E419.13
uterus, adult pregnant day19.CNhs10497.590-15F516.70
uterus, adult.CNhs10509.92-27E518.13
vagina, adult.CNhs10502.89-27D516.72
vesicular gland, adult.CNhs10491.51-27F820.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A146.31
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A232.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A341.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D732.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A443.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A743.23
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A938.83
whole body, embryo E11.CNhs11014.324-5I825.22
whole body, embryo E12.CNhs10587.857-27C922.74
whole body, embryo E13.CNhs10512.372-23H223.56
whole body, embryo E14.5.CNhs10578.420-27D215.07
whole body, embryo E14.CNhs10519.395-14B119.91
whole body, embryo E16.CNhs10514.453-14F218.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.94
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.20
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.80
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G525.96
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.99
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.51
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.04
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.40
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G523.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.78
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.07
whole body, embryo E17.5.CNhs10513.490-9F918.90
whole body, embryo E17.CNhs10517.475-3I516.24
whole body, embryo E18.CNhs10516.493-3B315.91
whole body, neonate N00.CNhs10525.657-19C217.83
whole body, neonate N01.CNhs10576.659-23C613.39
whole body, neonate N06.CNhs10515.692-21D111.91
whole body, neonate N10.CNhs10518.761-6B413.91





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:73730676..73730692,-&oldid=869560"