Personal tools

FFCP PHASE1:Mm9::chr2:84877369..84877459,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:84877369..84877459,+
|short_description=p1@Ssrp1
|description=CAGE_peak_1_at_Ssrp1_5end
|association_with_transcript=0bp_to_ENSMUST00000077798_5end
|EntrezGene=20833
|EntrezGene=20833
|HGNC=
|HGNC=
|UniProt=Q08943
|UniProt=Q08943
|association_with_transcript=0bp_to_ENSMUST00000077798_5end
|description=CAGE_peak_1_at_Ssrp1_5end
|id=chr2:84877369..84877459,+
|ontology_enrichment_disease=
|phase1_expression=20.979498970728,1.74487703819681,0.454999239389536,1.51232105653415,1.00179145989269,7.89032577985882,6.77476657727024,13.0414556675992,26.7498572088167,19.8954847373694,35.7845553591305,37.3333704098174,15.4080656938085,15.2985704233245,16.6554880907831,19.0326751346436,16.0899231969474,16.0885704332701,15.4939309974485,12.7316895539409,17.3488311908182,39.5177985779523,31.6051744858112,6.07971206614945,7.57050627521661,3.44539178469012,2.58457197695445,4.95583835177545,6.08074942260396,8.82105454159758,9.3126814475228,18.4158895303293,24.6025915033828,31.6963362030877,13.2871745085586,19.2832188615851,13.8835162258411,11.3003540298965,13.2827008569046,15.7057123192139,4.70585190424811,9.56263678941824,8.73918635456076,16.1147927008739,15.3079166141467,17.4369414553597,6.25913075478431,20.7123898561424,15.1583466086786,16.3321115222398,21.5579089303058,12.9377307928474,13.0870432725034,13.0565185562042,11.7632829699862,15.9500850342287,8.02293631828519,9.28209766099396,41.0702415544984,48.667170093027,39.9313784208893,14.2314703469035,15.1180115338894,3.5995988691256,2.96659908770092,7.104801149461,8.68840320503374,8.06858441175265,47.1787736003573,52.1122921960326,45.0095417291958,19.4242669394586,21.2033799313549,51.5686264694956,62.0120197487989,54.2339084099912,11.0115880999389,13.6625451751151,12.4421291937557,42.4673846491224,56.3563884590843,43.2358097562111,14.2383329490704,12.380777420697,17.1134037510027,23.2756582524197,27.7624777558251,37.6526880567107,16.6597625333005,24.5607570347053,10.4351215932604,6.0229671388697,5.439770669662,4.31762553310254,3.24888208723835,2.24013443548668,10.5333315098814,24.3715361286623,21.5622383820381,19.0803370235584,19.7180787687353,17.9657068380045,12.7402619853323,14.2213340630666,13.4224445426953,10.8944742154292,8.59391556525132,8.22123933977232,10.616453229534,8.31275978763019,44.0652729985985,26.4884966131563,17.7573932887165,22.759118723446,16.2272415847273,12.1896593589785,7.91023896749996,3.90418263683761,15.9229899350977,21.1914573431106,16.3422723660691,16.4857586065976,5.59175283654366,14.0534782565543,17.5935233723302,6.89734049063197,35.2256466047406,41.3932884385451,38.6293490302117,14.8292733010774,17.3850229071078,41.2146274930195,18.7730265807659,19.1786592997748,12.0517065844545,20.766881672673,27.700306967286,15.4264643556515,8.08712826987759,5.05060454127538,63.3686557228367,51.2681692886645,43.5750354128945,42.1973489940002,32.5214465943347,39.4590258477337,32.6082001467856,11.3829483125167,90.7541250247266,68.8346131810862,57.7119687257752,49.9766269934871,40.3168511377117,25.4224081561182,26.9574598694406,49.1614639041678,44.2394308007338,51.469581422943,33.5312929286799,36.8683875113193,39.6349041368053,29.3501160181454,23.9112182941062,26.3664070541521,23.9114024975436,17.672579801031,15.0233104783787,12.1435956061856,13.9875872426458,9.68588038066662,5.26947262048062,5.70179950958796,5.70830299756732,6.57611451925822,20.6084149592845,42.3967003002652,1.32167513193519,6.87571473325215,73.5844464346557,58.2914046369701,40.2066479324931,19.3616183638409,22.0154263406422,14.4571475845545,9.96511029243474,11.3642278759568,12.5667604400135,10.9426059622633,11.1129529657898,7.19055526923377,6.91641759599022,5.97423819763102,55.9520307811591,58.0382444057422,47.3372489826938,39.9156602576816,36.4630675875136,20.9004743273149,15.240005446946,7.52811754695971,8.16393384775149,9.62497878590044,3.55743152504579,30.8663445574774,29.6804082620937,24.9596944747188,19.4745716532963,14.9529839046498,14.0044218479781,12.6586300478357,15.7271169971784,13.1789478330279,43.1304619582064,12.6527922207291,9.98520553966594,4.54641980304801,7.3552939543984,7.71909634181387,8.31389355749721,58.5528462370798,51.8228625085642,44.6429575588745,44.8258374231039,22.4458384972033,13.5684875305028,9.95181604074774,17.6551361398934,15.5025282754142,10.2051051940792,9.83179888294428,9.15230403889247,9.83613598354279,4.52373851817817,4.35124547054968,8.85175691434265,8.27810238914197,13.9679013289379,15.1203075703942,41.9673460164289,6.31177318010932,35.9679370134533,41.3865068954437,35.329437228179,31.5438813297369,29.1866263047936,27.7415000173056,42.100312974189,24.8417479224615,24.903130010631,22.4924921495265,12.3487874131194,46.1189913498191,37.9526615293832,15.1772513134733,6.63725691699814,44.1860757802066,38.9997388484529,24.141450208755,18.6040192514887,16.2940628410282,14.4719844174204,17.0860852854428,14.2598951353889,11.3773232856894,3.16255825724996,9.28219889233682,19.7454971337197,59.9603443124263,59.7637119076326,37.2946440954971,37.2414490648775,29.6092237219437,34.061647264639,24.6616608782825,25.5792161789444,9.32061111800809,7.93902232997863,5.7710188529518,14.3703339759356,24.5473604457594,15.9958940964203,13.29541287935,11.9507143018239,12.4234952347041,18.2831842453702,36.9432493654168,28.5199572149356,24.2995309536051,28.5690935936943,19.6749228957609,38.2451467486174,43.9447560296286,35.9319931891502,7.63736494412091,77.0278144370065,40.257254491116,37.0458319018778,26.3451252978231,20.9628061196331,19.2856015330294,13.3898598275044,7.59092231753686,7.90651337079936,5.59205381778233,45.0954350947352,50.2375594707769,58.4068471313555,47.6405411442917,48.9515730980601,44.4354610040747,31.4517399570621,30.4678260534843,23.8030711846364,22.2257391159926,26.4987605757236,21.8047673233443,59.8039385105984,48.8904156104578,40.2754551231165,40.1019798295158,25.4312134120019,33.4143349665513,30.1286635436138,34.1266600824739,26.9010027492149,23.7949796922944,23.1949756160611,21.5514525274338,15.8952586966934,5.66825959038028,41.067401374202,47.0100608633653,32.7375001909953,5.02292944483695,8.07034644440082,13.1869169472431,8.7891035422417,10.5330141847426,15.2482997506608,18.4130094602871,18.9055519435001,16.3260523226503,14.3867329151835,15.8632718451837,21.6007200074178,13.9599572999508,13.1411298605419,15.5328093525546,79.3973209018951,59.0556812633526,51.5615489377485,31.8469799359465,37.7303692730368,22.9804385562518,18.2242316797324,21.427645952845,17.6505565275498,19.4576853058124,16.4761544928656,20.7488975524684,18.9155845089162,22.6008787989189,19.8152367896866,12.859929664643,16.6873429360592,22.3774695737898,20.192209139362,19.7246552980092,18.5149396288124,21.2970967391205,19.5517675756803,21.3659232449523,18.1631104201588,22.0844126597276,22.3172126904783,18.1518100892112,19.4199882799582,21.8845485946518,22.7779234798414,17.4352933804747,12.6861623382604,21.2263472424773,21.0268205969444,33.7244280216227,23.1592292360954,12.247650080753,12.6250299165437,12.3531194706929,10.434052602919
|phase1_expression=20.979498970728,1.74487703819681,0.454999239389536,1.51232105653415,1.00179145989269,7.89032577985882,6.77476657727024,13.0414556675992,26.7498572088167,19.8954847373694,35.7845553591305,37.3333704098174,15.4080656938085,15.2985704233245,16.6554880907831,19.0326751346436,16.0899231969474,16.0885704332701,15.4939309974485,12.7316895539409,17.3488311908182,39.5177985779523,31.6051744858112,6.07971206614945,7.57050627521661,3.44539178469012,2.58457197695445,4.95583835177545,6.08074942260396,8.82105454159758,9.3126814475228,18.4158895303293,24.6025915033828,31.6963362030877,13.2871745085586,19.2832188615851,13.8835162258411,11.3003540298965,13.2827008569046,15.7057123192139,4.70585190424811,9.56263678941824,8.73918635456076,16.1147927008739,15.3079166141467,17.4369414553597,6.25913075478431,20.7123898561424,15.1583466086786,16.3321115222398,21.5579089303058,12.9377307928474,13.0870432725034,13.0565185562042,11.7632829699862,15.9500850342287,8.02293631828519,9.28209766099396,41.0702415544984,48.667170093027,39.9313784208893,14.2314703469035,15.1180115338894,3.5995988691256,2.96659908770092,7.104801149461,8.68840320503374,8.06858441175265,47.1787736003573,52.1122921960326,45.0095417291958,19.4242669394586,21.2033799313549,51.5686264694956,62.0120197487989,54.2339084099912,11.0115880999389,13.6625451751151,12.4421291937557,42.4673846491224,56.3563884590843,43.2358097562111,14.2383329490704,12.380777420697,17.1134037510027,23.2756582524197,27.7624777558251,37.6526880567107,16.6597625333005,24.5607570347053,10.4351215932604,6.0229671388697,5.439770669662,4.31762553310254,3.24888208723835,2.24013443548668,10.5333315098814,24.3715361286623,21.5622383820381,19.0803370235584,19.7180787687353,17.9657068380045,12.7402619853323,14.2213340630666,13.4224445426953,10.8944742154292,8.59391556525132,8.22123933977232,10.616453229534,8.31275978763019,44.0652729985985,26.4884966131563,17.7573932887165,22.759118723446,16.2272415847273,12.1896593589785,7.91023896749996,3.90418263683761,15.9229899350977,21.1914573431106,16.3422723660691,16.4857586065976,5.59175283654366,14.0534782565543,17.5935233723302,6.89734049063197,35.2256466047406,41.3932884385451,38.6293490302117,14.8292733010774,17.3850229071078,41.2146274930195,18.7730265807659,19.1786592997748,12.0517065844545,20.766881672673,27.700306967286,15.4264643556515,8.08712826987759,5.05060454127538,63.3686557228367,51.2681692886645,43.5750354128945,42.1973489940002,32.5214465943347,39.4590258477337,32.6082001467856,11.3829483125167,90.7541250247266,68.8346131810862,57.7119687257752,49.9766269934871,40.3168511377117,25.4224081561182,26.9574598694406,49.1614639041678,44.2394308007338,51.469581422943,33.5312929286799,36.8683875113193,39.6349041368053,29.3501160181454,23.9112182941062,26.3664070541521,23.9114024975436,17.672579801031,15.0233104783787,12.1435956061856,13.9875872426458,9.68588038066662,5.26947262048062,5.70179950958796,5.70830299756732,6.57611451925822,20.6084149592845,42.3967003002652,1.32167513193519,6.87571473325215,73.5844464346557,58.2914046369701,40.2066479324931,19.3616183638409,22.0154263406422,14.4571475845545,9.96511029243474,11.3642278759568,12.5667604400135,10.9426059622633,11.1129529657898,7.19055526923377,6.91641759599022,5.97423819763102,55.9520307811591,58.0382444057422,47.3372489826938,39.9156602576816,36.4630675875136,20.9004743273149,15.240005446946,7.52811754695971,8.16393384775149,9.62497878590044,3.55743152504579,30.8663445574774,29.6804082620937,24.9596944747188,19.4745716532963,14.9529839046498,14.0044218479781,12.6586300478357,15.7271169971784,13.1789478330279,43.1304619582064,12.6527922207291,9.98520553966594,4.54641980304801,7.3552939543984,7.71909634181387,8.31389355749721,58.5528462370798,51.8228625085642,44.6429575588745,44.8258374231039,22.4458384972033,13.5684875305028,9.95181604074774,17.6551361398934,15.5025282754142,10.2051051940792,9.83179888294428,9.15230403889247,9.83613598354279,4.52373851817817,4.35124547054968,8.85175691434265,8.27810238914197,13.9679013289379,15.1203075703942,41.9673460164289,6.31177318010932,35.9679370134533,41.3865068954437,35.329437228179,31.5438813297369,29.1866263047936,27.7415000173056,42.100312974189,24.8417479224615,24.903130010631,22.4924921495265,12.3487874131194,46.1189913498191,37.9526615293832,15.1772513134733,6.63725691699814,44.1860757802066,38.9997388484529,24.141450208755,18.6040192514887,16.2940628410282,14.4719844174204,17.0860852854428,14.2598951353889,11.3773232856894,3.16255825724996,9.28219889233682,19.7454971337197,59.9603443124263,59.7637119076326,37.2946440954971,37.2414490648775,29.6092237219437,34.061647264639,24.6616608782825,25.5792161789444,9.32061111800809,7.93902232997863,5.7710188529518,14.3703339759356,24.5473604457594,15.9958940964203,13.29541287935,11.9507143018239,12.4234952347041,18.2831842453702,36.9432493654168,28.5199572149356,24.2995309536051,28.5690935936943,19.6749228957609,38.2451467486174,43.9447560296286,35.9319931891502,7.63736494412091,77.0278144370065,40.257254491116,37.0458319018778,26.3451252978231,20.9628061196331,19.2856015330294,13.3898598275044,7.59092231753686,7.90651337079936,5.59205381778233,45.0954350947352,50.2375594707769,58.4068471313555,47.6405411442917,48.9515730980601,44.4354610040747,31.4517399570621,30.4678260534843,23.8030711846364,22.2257391159926,26.4987605757236,21.8047673233443,59.8039385105984,48.8904156104578,40.2754551231165,40.1019798295158,25.4312134120019,33.4143349665513,30.1286635436138,34.1266600824739,26.9010027492149,23.7949796922944,23.1949756160611,21.5514525274338,15.8952586966934,5.66825959038028,41.067401374202,47.0100608633653,32.7375001909953,5.02292944483695,8.07034644440082,13.1869169472431,8.7891035422417,10.5330141847426,15.2482997506608,18.4130094602871,18.9055519435001,16.3260523226503,14.3867329151835,15.8632718451837,21.6007200074178,13.9599572999508,13.1411298605419,15.5328093525546,79.3973209018951,59.0556812633526,51.5615489377485,31.8469799359465,37.7303692730368,22.9804385562518,18.2242316797324,21.427645952845,17.6505565275498,19.4576853058124,16.4761544928656,20.7488975524684,18.9155845089162,22.6008787989189,19.8152367896866,12.859929664643,16.6873429360592,22.3774695737898,20.192209139362,19.7246552980092,18.5149396288124,21.2970967391205,19.5517675756803,21.3659232449523,18.1631104201588,22.0844126597276,22.3172126904783,18.1518100892112,19.4199882799582,21.8845485946518,22.7779234798414,17.4352933804747,12.6861623382604,21.2263472424773,21.0268205969444,33.7244280216227,23.1592292360954,12.247650080753,12.6250299165437,12.3531194706929,10.434052602919
|short_description=p1@Ssrp1
}}
}}

Revision as of 11:01, 18 April 2012

Short description:p1@Ssrp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ssrp1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000077798_5end
EntrezGene:Ssrp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ssrp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.89
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E726.75
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F219.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E635.78
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F137.33
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.41
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E815.30
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A116.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A319.03
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.49
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.73
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H239.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I931.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.57
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B96.08
Ileum epithelium, pool2.CNhs13232.10253-104C18.82
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I318.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G624.60
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.28
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H29.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.31
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.44
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.16
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C421.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.09
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.06
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C341.07
Mouse Granule cells, donor2.CNhs12357.11731-123E348.67
Mouse Granule cells, donor3.CNhs12108.11636-122C739.93
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.23
Mouse Meningeal cells, donor3.CNhs12109.11639-122D115.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C88.69
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D547.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F552.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D945.01
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D251.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F262.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D654.23
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D442.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F456.36
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D843.24
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D623.28
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.76
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E137.65
Mouse Schwann, donor1.CNhs12507.11728-123D916.66
Mouse Schwann, donor2.CNhs12573.11746-123F924.56
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E321.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.08
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.59
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.22
accessory axillary lymph node, adult.CNhs10475.1063-29H910.62
adrenal gland, adult.CNhs10508.49-24D78.31
adrenal gland, embryo E14.CNhs11038.406-44C544.07
adrenal gland, embryo E16.CNhs11004.1254-43D626.49
adrenal gland, embryo E17.CNhs11043.1263-45I117.76
adrenal gland, embryo E18.CNhs11026.1262-18F522.76
adrenal gland, neonate N00.CNhs11191.1311-23C116.23
adrenal gland, neonate N25.CNhs11223.1377-27I312.19
amnion, adult pregnant day17.5.CNhs10488.583-22A87.91
aorta, adult.CNhs10498.46-23H13.90
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F521.19
bone (os femoris), neonate N16.CNhs11225.1525-43A616.34
bone (os femoris), neonate N20.CNhs11195.1350-25C316.49
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I217.59
colon, adult.CNhs10468.36-18H76.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C735.23
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D141.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D438.63
corpora quadrigemina, adult.CNhs10501.16-22A414.83
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F141.21
cortex, adult.CNhs10473.12-14D518.77
cortex, neonate N30.CNhs11107.1392-42F219.18
diencephalon, adult.CNhs10482.20-12F212.05
diencephalon, neonate N30.CNhs11201.1388-42B220.77
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B127.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.43
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C663.37
eyeball, embryo E14.CNhs10521.399-16E251.27
eyeball, embryo E15.CNhs10593.426-16C943.58
eyeball, embryo E17.CNhs11023.1261-18D442.20
eyeball, neonate N00.CNhs11207.633-15C632.52
eyeball, neonate N01.CNhs11140.1532-43E739.46
eyeball, neonate N02.CNhs11205.1551-44G832.61
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E290.75
forelimb, embryo E12.CNhs10600.359-14H268.83
forelimb, embryo E13.CNhs10589.384-1E257.71
forelimb, embryo E14.CNhs10577.413-26A849.98
forelimb, embryo E15.CNhs11007.437-20E740.32
forelimb, embryo E17.CNhs10598.1517-43C425.42
forelimb, embryo E18.CNhs11008.1520-43B526.96
gonad, embryo E13.CNhs11044.1564-45I649.16
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C844.24
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D251.47
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D533.53
heart, embryo E11.CNhs10586.331-24E936.87
heart, embryo E12.CNhs11015.353-12F539.63
heart, embryo E13.CNhs11013.376-3I929.35
heart, embryo E14.CNhs10597.403-26D423.91
heart, embryo E15.CNhs11017.431-16C826.37
heart, embryo E16.CNhs11021.457-17C623.91
heart, embryo E17.CNhs11025.479-18E517.67
heart, embryo E18.CNhs11030.1283-20G315.02
heart, neonate N00.CNhs11213.639-21E312.14
heart, neonate N03.CNhs11221.1349-25I213.99
heart, neonate N10.CNhs11118.749-24G19.69
heart, neonate N16.CNhs11209.782-15G15.27
heart, neonate N20.CNhs11127.821-26I65.70
heart, neonate N25.CNhs11196.1351-25D35.71
heart, neonate N30.CNhs11202.1390-42D26.58
hippocampus, adult.CNhs10478.13-16E820.61
hippocampus, neonate N00.CNhs11228.627-43G142.40
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A36.88
intestine, embryo E12.CNhs11019.1251-16I573.58
intestine, embryo E13.CNhs11010.381-16D558.29
intestine, embryo E15.CNhs10602.976-16D840.21
intestine, embryo E16.CNhs10585.463-22H419.36
intestine, embryo E17.CNhs10582.482-18D322.02
intestine, embryo E18.CNhs10526.1289-20F714.46
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E911.36
intestine, neonate N06.CNhs11102.688-20B812.57
intestine, neonate N07.CNhs11095.720-20F210.94
intestine, neonate N10.CNhs11098.755-23A511.11
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E36.92
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I955.95
kidney, embryo E15.CNhs10997.434-16F858.04
kidney, embryo E16.CNhs10584.464-22A547.34
kidney, embryo E17.CNhs11028.483-18I239.92
kidney, embryo E18.CNhs11001.1288-20C736.46
kidney, neonate N00.CNhs11214.646-21G720.90
kidney, neonate N10.CNhs11206.758-6D515.24
kidney, neonate N20.CNhs11113.832-19I17.53
kidney, neonate N25.CNhs11122.1353-25F38.16
kidney, neonate N30.CNhs11203.1385-42H19.62
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F830.87
liver, embryo E13.CNhs10524.378-3H629.68
liver, embryo E14.CNhs10594.409-16E124.96
liver, embryo E15.CNhs10520.433-16D719.47
liver, embryo E16.CNhs10523.462-17F514.95
liver, embryo E17.CNhs10510.481-18A314.00
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F415.73
liver, neonate N03.CNhs11123.1345-25G213.18
liver, neonate N06.CNhs11101.684-20A843.13
liver, neonate N07.CNhs11103.716-20H212.65
liver, neonate N10.CNhs11115.751-24B99.99
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H17.36
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B18.31
lung, embryo E12.CNhs10522.354-16G258.55
lung, embryo E14.CNhs10604.404-26F851.82
lung, embryo E15.CNhs11020.432-17C544.64
lung, embryo E16.CNhs10998.458-17B644.83
lung, embryo E17.CNhs10605.480-44A622.45
lung, embryo E18.CNhs10583.1287-20I613.57
lung, neonate N00.CNhs11224.640-42C69.95
lung, neonate N06.CNhs11212.683-20E517.66
lung, neonate N07.CNhs11111.715-19A315.50
lung, neonate N10.CNhs11219.750-23E610.21
lung, neonate N20.CNhs11109.822-18A49.83
lung, neonate N25.CNhs11119.1359-25C79.15
lung, neonate N30.CNhs11133.1394-42H29.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H28.28
medulla oblongata, adult.CNhs10477.17-12C213.97
medulla oblongata, neonate N30.CNhs11200.1396-42A315.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C741.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E135.97
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E241.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E335.33
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D731.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D829.19
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D927.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D442.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D524.84
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.90
olfactory brain, adult.CNhs10489.18-22I922.49
ovary, adult.CNhs10507.91-2I712.35
ovary, embryo E18.CNhs11040.505-44H746.12
ovary, neonate N00.CNhs11217.1299-22I437.95
oviduct, adult pregnant day01.CNhs10500.988-6G615.18
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F444.19
pancreas, embryo E15.CNhs11042.1556-45F239.00
pancreas, embryo E16.CNhs11003.460-26E524.14
pancreas, embryo E17.CNhs10599.1558-45G318.60
pancreas, embryo E18.CNhs10580.1535-43I716.29
pancreas, neonate N00.CNhs11105.645-26G914.47
pancreas, neonate N01.CNhs11138.1531-43D717.09
pancreas, neonate N02.CNhs11139.1539-43D814.26
pancreas, neonate N16.CNhs11136.787-43B611.38
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G819.75
pituitary gland, embryo E12.CNhs11018.346-16E659.96
pituitary gland, embryo E13.CNhs11009.370-44C759.76
pituitary gland, embryo E14.CNhs11037.398-44A537.29
pituitary gland, embryo E15.CNhs10592.427-16B937.24
pituitary gland, embryo E16.CNhs11036.449-43F629.61
pituitary gland, embryo E17.CNhs11039.1265-44F534.06
pituitary gland, neonate N00.CNhs11190.1308-22E924.66
placenta, adult pregnant day10.CNhs10472.539-13I725.58
placenta, adult pregnant day17.CNhs10464.577-18G39.32
prostate, adult.CNhs10470.859-1F87.94
skin, adult.CNhs10492.30-1C35.77
skin, neonate N00.CNhs11124.650-25G414.37
skin, neonate N03.CNhs11215.662-22H324.55
skin, neonate N06.CNhs11097.693-20I516.00
skin, neonate N10.CNhs11108.762-6C413.30
small intestine, neonate N16.CNhs11114.790-21I111.95
spinal cord, adult.CNhs10505.24-13C912.42
spleen, adult.CNhs10465.25-2G218.28
spleen, embryo E16.CNhs11035.461-43C136.94
spleen, embryo E18.CNhs11011.1271-21F228.52
spleen, neonate N10.CNhs11116.752-24D124.30
spleen, neonate N20.CNhs11112.824-19H128.57
spleen, neonate N25.CNhs11099.1354-25G319.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C638.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C943.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D335.93
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E377.03
stomach, embryo E15.CNhs10603.1252-16G840.26
stomach, embryo E16.CNhs11022.459-17D437.05
stomach, embryo E17.CNhs11006.1035-18D526.35
stomach, embryo E18.CNhs10999.1286-20C620.96
stomach, neonate N03.CNhs11193.1340-24B819.29
stomach, neonate N07.CNhs11210.718-18A913.39
stomach, neonate N25.CNhs11104.1355-25E47.59
stomach, neonate N30.CNhs11134.1386-42I17.91
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G545.10
testis, embryo E13.CNhs11031.389-23F550.24
testis, embryo E15.CNhs11034.443-27C558.41
testis, embryo E16.CNhs11033.470-26G547.64
testis, embryo E17.CNhs11029.486-18I548.95
testis, embryo E18.CNhs11027.503-18G544.44
testis, neonate N00.CNhs11189.1300-22B731.45
testis, neonate N07.CNhs11222.726-26I430.47
testis, neonate N10.CNhs11204.763-44D923.80
testis, neonate N20.CNhs11110.839-18H322.23
testis, neonate N30.CNhs11130.1391-42E226.50
thymus, adult.CNhs10471.38-12B521.80
thymus, embryo E14.CNhs11041.402-44I459.80
thymus, embryo E15.CNhs11005.430-45I248.89
thymus, embryo E16.CNhs11002.456-26C540.28
thymus, embryo E17.CNhs10581.478-18C140.10
thymus, embryo E18.CNhs10595.1273-19G425.43
thymus, neonate N02.CNhs11181.1541-43F833.41
thymus, neonate N03.CNhs11137.2104-43C730.13
thymus, neonate N06.CNhs11197.681-26C434.13
thymus, neonate N07.CNhs11211.713-19D326.90
thymus, neonate N10.CNhs11194.748-24E423.79
thymus, neonate N20.CNhs11186.820-7A223.19
thymus, neonate N25.CNhs11125.1362-25G721.55
thymus, neonate N30.CNhs11132.1393-42G215.90
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H341.07
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F747.01
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G532.74
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F58.07
uterus, adult.CNhs10509.92-27E513.19
vagina, adult.CNhs10502.89-27D58.79
vesicular gland, adult.CNhs10491.51-27F810.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I879.40
whole body, embryo E12.CNhs10587.857-27C959.06
whole body, embryo E13.CNhs10512.372-23H251.56
whole body, embryo E14.5.CNhs10578.420-27D231.85
whole body, embryo E14.CNhs10519.395-14B137.73
whole body, embryo E16.CNhs10514.453-14F222.98
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.65
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.46
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G522.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.82
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.30
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.55
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.37
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G522.32
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G521.88
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.44
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.23
whole body, embryo E17.5.CNhs10513.490-9F921.03
whole body, embryo E17.CNhs10517.475-3I533.72
whole body, embryo E18.CNhs10516.493-3B323.16
whole body, neonate N00.CNhs10525.657-19C212.25
whole body, neonate N01.CNhs10576.659-23C612.63
whole body, neonate N06.CNhs10515.692-21D112.35
whole body, neonate N10.CNhs10518.761-6B410.43





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:84877369..84877459,%2B&oldid=871942"