Personal tools

FFCP PHASE1:Mm9::chr4:129419477..129419512,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:129419477..129419512,-
|short_description=p2@Khdrbs1
|description=CAGE_peak_2_at_Khdrbs1_5end
|association_with_transcript=13bp_to_uc008uyc.1,uc008uyd.1,uc008uye.1_5end
|EntrezGene=20218
|EntrezGene=20218
|HGNC=
|HGNC=
|UniProt=Q60749
|UniProt=Q60749
|association_with_transcript=13bp_to_uc008uyc.1,uc008uyd.1,uc008uye.1_5end
|description=CAGE_peak_2_at_Khdrbs1_5end
|id=chr4:129419477..129419512,-
|ontology_enrichment_disease=
|phase1_expression=36.3537882927882,19.8915982354436,15.0149748998547,14.8207463540347,24.543890767371,22.6637017081051,17.2873354040689,55.9103990502025,98.5521055061667,96.9027138973053,44.3454537704058,43.874687447435,40.5745729936958,51.2283558175325,25.9825614216217,18.4252493324742,18.1886088313318,34.543107106727,34.0043795342232,28.00971701867,19.474913444595,34.9504148227116,24.0303806007821,16.6392119705143,20.8762445771125,17.8011908875656,20.2458138194765,15.7293999860699,18.6222951067246,23.1867719379136,19.9557459589774,13.3356441426523,17.8368788399525,31.6963362030877,17.0422455653252,19.2832188615851,17.9669033510885,25.1118978442145,15.626706890476,13.6116173433188,18.2351761289614,22.5405010036287,24.2755176515577,17.7514513345564,20.0726323814639,17.2533947031981,12.5182615095686,15.6978112593922,14.7189742432096,11.665793944457,14.5585878490377,10.062679505548,35.4021298781824,62.3811442129756,50.7501636705121,19.8089765747679,12.0344044774278,13.4074743992135,56.2439761189682,53.9570798857474,53.8756692980252,14.2314703469035,12.450127145556,14.3983954765024,8.89979726310277,11.3676818391376,16.4780060785123,16.1371688235053,47.2824632126658,50.3572149977206,47.7437662267637,18.2816630018434,17.2277461942259,60.8779272098322,60.6701831545436,46.8801581171111,20.9220173898839,20.3022867555448,19.3544231902867,63.0416455350327,57.0882896079036,50.007683573449,19.2636269310953,22.5105044012672,20.933359945423,23.5702868378934,20.5015220350708,45.8542636730239,14.7666076999709,21.6134661905407,33.3344162006929,6.88339101585109,14.2793980078628,10.2543606411185,9.09686984426737,13.8888335000174,15.308441794361,16.1908806449155,13.768658243952,12.3668851078619,31.8306128695298,8.98285341900225,7.64415719119937,14.2213340630666,15.5873549528074,16.4683912558814,21.7375511356357,14.0446172054444,28.7421050848361,15.289540323677,36.6054039476547,23.1393763517227,24.9064737036543,21.7040602395776,25.7519268627194,17.8446559688139,20.7643772896874,15.9059292611903,16.8076004870476,21.6767578929528,18.5506875506731,21.3345111379498,24.2309289583559,20.4946557908083,20.7352239745321,26.5675337416935,34.0274953596814,37.7938720525847,26.1764667770513,21.8694333531041,23.33253074375,40.3350470282295,13.5582969749976,10.9957646652042,27.8435979709811,15.8996437806402,25.9690377818307,18.9098595327341,10.3616330957807,13.4682787767343,50.486731869529,44.6010082600937,38.8934200379554,28.4832105709501,36.1273810493551,34.3344770363397,27.64200874512,24.0594134787285,72.430845625435,52.5714902866538,46.6270479034464,35.7289043856947,28.0827721717854,24.3776516565517,17.9030458674911,33.6367910923253,30.1951670544691,30.3670530395364,27.8480229407681,39.5610225542809,35.1789089971644,27.5494954035353,34.3279866598555,29.9081632256054,25.1455394006427,30.4619467623034,32.7293549707535,24.8710179242071,24.1902979372816,20.1925980817287,18.7268950050927,17.1053985287639,19.5399602609035,14.4942932261202,10.0939175310781,25.1087254205454,19.1642894130603,16.6603856998033,46.496838616681,34.6032641072053,28.995178797471,24.4037064794244,22.9049385160216,16.1691782195675,23.7264530772256,21.0814662046734,21.8661631656234,20.8904295643208,16.182019230887,22.4704852163555,19.4524244887225,19.1175622324193,61.2627320078454,42.3861981782094,36.0664754153857,32.7878637830956,29.6747305366467,33.1041069882304,25.1049052383301,16.3847264257358,15.5428740562961,13.9438795231635,13.6368208460088,26.528371808859,26.5354643402824,20.2375901146368,13.3887680116412,17.364755502174,20.1154422907322,14.6725030099913,23.5096078823801,14.0026320725922,15.814502718009,21.2120340171047,15.2898459826135,14.1444171650383,11.4814344654024,16.4030797263545,19.7685913478267,46.2359044719983,40.4153141576224,36.1557032701151,27.2240688014662,26.1309761609233,26.1848004974615,31.02625000939,28.2166907950082,26.3542980682042,25.9911272911704,16.0586048421423,16.2323882953942,17.3578870297814,12.0633027151418,14.1415477792864,11.3105782794378,14.9005843004556,24.0825884981688,21.4497386463732,32.4591191845817,13.3809591418318,43.5401342794434,37.0916807081807,50.8399218649405,50.4224163679885,39.6581639866662,53.7845408498782,50.6013377093618,42.6693552550515,47.0392455756363,33.4174169078679,20.4393722699907,22.7923972694087,25.2474786998043,23.4257574621,10.619611067197,28.4053344301328,24.7905316711096,19.0491130553457,12.6979813938732,15.3717573971964,21.4495483329624,18.9037539328303,16.3988794056972,10.1131762539461,6.32511651449993,7.21948802737308,31.3204437293485,43.3947236615458,38.6782464510436,36.6516329904023,39.9015525695116,38.8844022372514,32.0870590174136,26.4884505729701,21.8244688499251,15.2519091021951,13.4522322813527,11.3771514529621,24.5425928577776,20.3857686257167,17.7864792564673,16.2499490747611,26.5247561333164,20.7676338251771,26.655857404465,27.2430665711454,25.7420393043899,22.0391094695488,30.0727300986255,27.9109371311958,39.0950388985867,48.283251051662,44.5003915650245,13.3653886522116,46.5013910564269,30.2946006019005,23.6531696399745,14.6361807210128,19.4342681734098,18.6112798011053,18.1837602595739,15.9671124610258,14.6464919819726,10.5627683224777,43.4043562786827,30.9499250311036,22.005979230794,21.3896307178452,20.5364119329592,16.5577002980963,23.5888049677965,23.6971980415989,23.4884931513592,46.8673194402452,31.1072406758495,143.469048765193,43.180470856805,50.2256580536005,64.7005698429419,91.840694877418,84.6382571368189,87.7426781495773,85.8076152884294,91.3746372030736,113.014694269365,114.135241574903,125.81812403502,111.220888936221,123.538885605918,15.4176660858344,21.0886655705361,14.9822140537824,17.6278847182282,14.4892195524143,16.516057839704,23.0771046576754,18.8644173589578,13.5424468089548,9.60078132449013,8.74617949363636,5.72895513439397,6.70227411140382,7.53590771747707,9.06472676867641,10.1253375034771,7.20513925158753,9.5159905886683,10.8729665467882,61.7534718125851,39.5034624667021,37.9028604774178,28.4434858969904,36.6823034598969,31.2533964365024,25.3361269693841,23.281961467995,23.1061830906107,24.2589323293246,23.8270541896825,25.2759297457342,23.129452345061,24.7777339806844,25.5587836852479,25.719859329286,23.9880554705851,22.5703787942535,20.6042950401653,22.5214347805628,24.3437169193645,20.7646693206425,28.8507789836258,24.9995836607605,20.2335167892961,21.3228811887025,21.5855007989872,20.5194374921517,20.2348129630334,28.0571135828869,25.0319888242007,25.0201385233931,13.9138554677694,21.0714104012914,26.4282057044164,31.9757539760571,23.3931608445408,24.7101712155543,22.9545998482612,18.3090877869198,22.02744438394
|phase1_expression=36.3537882927882,19.8915982354436,15.0149748998547,14.8207463540347,24.543890767371,22.6637017081051,17.2873354040689,55.9103990502025,98.5521055061667,96.9027138973053,44.3454537704058,43.874687447435,40.5745729936958,51.2283558175325,25.9825614216217,18.4252493324742,18.1886088313318,34.543107106727,34.0043795342232,28.00971701867,19.474913444595,34.9504148227116,24.0303806007821,16.6392119705143,20.8762445771125,17.8011908875656,20.2458138194765,15.7293999860699,18.6222951067246,23.1867719379136,19.9557459589774,13.3356441426523,17.8368788399525,31.6963362030877,17.0422455653252,19.2832188615851,17.9669033510885,25.1118978442145,15.626706890476,13.6116173433188,18.2351761289614,22.5405010036287,24.2755176515577,17.7514513345564,20.0726323814639,17.2533947031981,12.5182615095686,15.6978112593922,14.7189742432096,11.665793944457,14.5585878490377,10.062679505548,35.4021298781824,62.3811442129756,50.7501636705121,19.8089765747679,12.0344044774278,13.4074743992135,56.2439761189682,53.9570798857474,53.8756692980252,14.2314703469035,12.450127145556,14.3983954765024,8.89979726310277,11.3676818391376,16.4780060785123,16.1371688235053,47.2824632126658,50.3572149977206,47.7437662267637,18.2816630018434,17.2277461942259,60.8779272098322,60.6701831545436,46.8801581171111,20.9220173898839,20.3022867555448,19.3544231902867,63.0416455350327,57.0882896079036,50.007683573449,19.2636269310953,22.5105044012672,20.933359945423,23.5702868378934,20.5015220350708,45.8542636730239,14.7666076999709,21.6134661905407,33.3344162006929,6.88339101585109,14.2793980078628,10.2543606411185,9.09686984426737,13.8888335000174,15.308441794361,16.1908806449155,13.768658243952,12.3668851078619,31.8306128695298,8.98285341900225,7.64415719119937,14.2213340630666,15.5873549528074,16.4683912558814,21.7375511356357,14.0446172054444,28.7421050848361,15.289540323677,36.6054039476547,23.1393763517227,24.9064737036543,21.7040602395776,25.7519268627194,17.8446559688139,20.7643772896874,15.9059292611903,16.8076004870476,21.6767578929528,18.5506875506731,21.3345111379498,24.2309289583559,20.4946557908083,20.7352239745321,26.5675337416935,34.0274953596814,37.7938720525847,26.1764667770513,21.8694333531041,23.33253074375,40.3350470282295,13.5582969749976,10.9957646652042,27.8435979709811,15.8996437806402,25.9690377818307,18.9098595327341,10.3616330957807,13.4682787767343,50.486731869529,44.6010082600937,38.8934200379554,28.4832105709501,36.1273810493551,34.3344770363397,27.64200874512,24.0594134787285,72.430845625435,52.5714902866538,46.6270479034464,35.7289043856947,28.0827721717854,24.3776516565517,17.9030458674911,33.6367910923253,30.1951670544691,30.3670530395364,27.8480229407681,39.5610225542809,35.1789089971644,27.5494954035353,34.3279866598555,29.9081632256054,25.1455394006427,30.4619467623034,32.7293549707535,24.8710179242071,24.1902979372816,20.1925980817287,18.7268950050927,17.1053985287639,19.5399602609035,14.4942932261202,10.0939175310781,25.1087254205454,19.1642894130603,16.6603856998033,46.496838616681,34.6032641072053,28.995178797471,24.4037064794244,22.9049385160216,16.1691782195675,23.7264530772256,21.0814662046734,21.8661631656234,20.8904295643208,16.182019230887,22.4704852163555,19.4524244887225,19.1175622324193,61.2627320078454,42.3861981782094,36.0664754153857,32.7878637830956,29.6747305366467,33.1041069882304,25.1049052383301,16.3847264257358,15.5428740562961,13.9438795231635,13.6368208460088,26.528371808859,26.5354643402824,20.2375901146368,13.3887680116412,17.364755502174,20.1154422907322,14.6725030099913,23.5096078823801,14.0026320725922,15.814502718009,21.2120340171047,15.2898459826135,14.1444171650383,11.4814344654024,16.4030797263545,19.7685913478267,46.2359044719983,40.4153141576224,36.1557032701151,27.2240688014662,26.1309761609233,26.1848004974615,31.02625000939,28.2166907950082,26.3542980682042,25.9911272911704,16.0586048421423,16.2323882953942,17.3578870297814,12.0633027151418,14.1415477792864,11.3105782794378,14.9005843004556,24.0825884981688,21.4497386463732,32.4591191845817,13.3809591418318,43.5401342794434,37.0916807081807,50.8399218649405,50.4224163679885,39.6581639866662,53.7845408498782,50.6013377093618,42.6693552550515,47.0392455756363,33.4174169078679,20.4393722699907,22.7923972694087,25.2474786998043,23.4257574621,10.619611067197,28.4053344301328,24.7905316711096,19.0491130553457,12.6979813938732,15.3717573971964,21.4495483329624,18.9037539328303,16.3988794056972,10.1131762539461,6.32511651449993,7.21948802737308,31.3204437293485,43.3947236615458,38.6782464510436,36.6516329904023,39.9015525695116,38.8844022372514,32.0870590174136,26.4884505729701,21.8244688499251,15.2519091021951,13.4522322813527,11.3771514529621,24.5425928577776,20.3857686257167,17.7864792564673,16.2499490747611,26.5247561333164,20.7676338251771,26.655857404465,27.2430665711454,25.7420393043899,22.0391094695488,30.0727300986255,27.9109371311958,39.0950388985867,48.283251051662,44.5003915650245,13.3653886522116,46.5013910564269,30.2946006019005,23.6531696399745,14.6361807210128,19.4342681734098,18.6112798011053,18.1837602595739,15.9671124610258,14.6464919819726,10.5627683224777,43.4043562786827,30.9499250311036,22.005979230794,21.3896307178452,20.5364119329592,16.5577002980963,23.5888049677965,23.6971980415989,23.4884931513592,46.8673194402452,31.1072406758495,143.469048765193,43.180470856805,50.2256580536005,64.7005698429419,91.840694877418,84.6382571368189,87.7426781495773,85.8076152884294,91.3746372030736,113.014694269365,114.135241574903,125.81812403502,111.220888936221,123.538885605918,15.4176660858344,21.0886655705361,14.9822140537824,17.6278847182282,14.4892195524143,16.516057839704,23.0771046576754,18.8644173589578,13.5424468089548,9.60078132449013,8.74617949363636,5.72895513439397,6.70227411140382,7.53590771747707,9.06472676867641,10.1253375034771,7.20513925158753,9.5159905886683,10.8729665467882,61.7534718125851,39.5034624667021,37.9028604774178,28.4434858969904,36.6823034598969,31.2533964365024,25.3361269693841,23.281961467995,23.1061830906107,24.2589323293246,23.8270541896825,25.2759297457342,23.129452345061,24.7777339806844,25.5587836852479,25.719859329286,23.9880554705851,22.5703787942535,20.6042950401653,22.5214347805628,24.3437169193645,20.7646693206425,28.8507789836258,24.9995836607605,20.2335167892961,21.3228811887025,21.5855007989872,20.5194374921517,20.2348129630334,28.0571135828869,25.0319888242007,25.0201385233931,13.9138554677694,21.0714104012914,26.4282057044164,31.9757539760571,23.3931608445408,24.7101712155543,22.9545998482612,18.3090877869198,22.02744438394
|short_description=p2@Khdrbs1
}}
}}

Revision as of 15:03, 18 April 2012

Short description:p2@Khdrbs1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Khdrbs1_5end
Coexpression cluster:NA
Association with transcript: 13bp_to_uc008uyc.1, uc008uyd.1, uc008uye.1_5end
EntrezGene:Khdrbs1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Khdrbs1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G736.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I519.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.82
CD326+ enterocyte, pool2.CNhs13197.11849-124I424.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I722.66
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.29
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E955.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E798.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F296.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E644.35
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F143.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E440.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E851.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A125.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A318.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A518.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A234.54
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A434.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.01
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H234.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.03
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D220.88
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I120.25
GP2+ M cell, pool3.CNhs13240.11847-124I215.73
Ileum epithelium, pool1.CNhs13199.10252-104B918.62
Ileum epithelium, pool2.CNhs13232.10253-104C123.19
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C819.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.28
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F717.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G825.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H222.54
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H424.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.75
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.07
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.25
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.70
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.72
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A235.40
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I962.38
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A150.75
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C119.81
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C356.24
Mouse Granule cells, donor2.CNhs12357.11731-123E353.96
Mouse Granule cells, donor3.CNhs12108.11636-122C753.88
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.23
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C714.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C816.48
Mouse Microglia, donor2.CNhs12634.11736-123E816.14
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D547.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F550.36
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D947.74
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.23
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D260.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F260.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D646.88
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D463.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F457.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D850.01
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E522.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D623.57
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.50
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E145.85
Mouse Schwann, donor1.CNhs12507.11728-123D914.77
Mouse Schwann, donor2.CNhs12573.11746-123F921.61
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.33
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.89
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G631.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G321.74
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.04
accessory axillary lymph node, adult.CNhs10475.1063-29H928.74
adrenal gland, adult.CNhs10508.49-24D715.29
adrenal gland, embryo E14.CNhs11038.406-44C536.61
adrenal gland, embryo E16.CNhs11004.1254-43D623.14
adrenal gland, embryo E17.CNhs11043.1263-45I124.91
adrenal gland, embryo E18.CNhs11026.1262-18F521.70
adrenal gland, neonate N00.CNhs11191.1311-23C125.75
adrenal gland, neonate N25.CNhs11223.1377-27I317.84
amnion, adult pregnant day17.5.CNhs10488.583-22A820.76
aorta, adult.CNhs10498.46-23H115.91
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F521.68
bone (os femoris), neonate N16.CNhs11225.1525-43A618.55
bone (os femoris), neonate N20.CNhs11195.1350-25C321.33
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B220.49
cerebellum, neonate N30.CNhs11135.1395-42I220.74
colon, adult.CNhs10468.36-18H726.57
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C734.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D137.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D426.18
corpora quadrigemina, adult.CNhs10501.16-22A421.87
corpus striatum, adult.CNhs10487.19-21D823.33
corpus striatum, neonate N00.CNhs11226.630-43F140.34
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F227.84
diencephalon, neonate N30.CNhs11201.1388-42B215.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.97
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.91
epididymis, adult.CNhs10490.58-23B210.36
eyeball, adult.CNhs10484.31-12G413.47
eyeball, embryo E12.CNhs11016.345-16C650.49
eyeball, embryo E14.CNhs10521.399-16E244.60
eyeball, embryo E15.CNhs10593.426-16C938.89
eyeball, embryo E17.CNhs11023.1261-18D428.48
eyeball, neonate N00.CNhs11207.633-15C636.13
eyeball, neonate N01.CNhs11140.1532-43E734.33
eyeball, neonate N02.CNhs11205.1551-44G827.64
eyeball, neonate N16.CNhs11188.777-19A224.06
forelimb, embryo E11.CNhs10596.335-25E272.43
forelimb, embryo E12.CNhs10600.359-14H252.57
forelimb, embryo E13.CNhs10589.384-1E246.63
forelimb, embryo E14.CNhs10577.413-26A835.73
forelimb, embryo E15.CNhs11007.437-20E728.08
forelimb, embryo E17.CNhs10598.1517-43C424.38
forelimb, embryo E18.CNhs11008.1520-43B517.90
gonad, embryo E13.CNhs11044.1564-45I633.64
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C830.20
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D230.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D527.85
heart, embryo E11.CNhs10586.331-24E939.56
heart, embryo E12.CNhs11015.353-12F535.18
heart, embryo E13.CNhs11013.376-3I927.55
heart, embryo E14.CNhs10597.403-26D434.33
heart, embryo E15.CNhs11017.431-16C829.91
heart, embryo E16.CNhs11021.457-17C625.15
heart, embryo E17.CNhs11025.479-18E530.46
heart, embryo E18.CNhs11030.1283-20G332.73
heart, neonate N00.CNhs11213.639-21E324.87
heart, neonate N03.CNhs11221.1349-25I224.19
heart, neonate N10.CNhs11118.749-24G120.19
heart, neonate N16.CNhs11209.782-15G118.73
heart, neonate N20.CNhs11127.821-26I617.11
heart, neonate N25.CNhs11196.1351-25D319.54
heart, neonate N30.CNhs11202.1390-42D214.49
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G125.11
intestinal mucosa, adult.CNhs10506.860-29I319.16
intestine, adult.CNhs10496.178-9A316.66
intestine, embryo E12.CNhs11019.1251-16I546.50
intestine, embryo E13.CNhs11010.381-16D534.60
intestine, embryo E15.CNhs10602.976-16D829.00
intestine, embryo E16.CNhs10585.463-22H424.40
intestine, embryo E17.CNhs10582.482-18D322.90
intestine, embryo E18.CNhs10526.1289-20F716.17
intestine, neonate N00.CNhs11126.644-26D123.73
intestine, neonate N01.CNhs11192.1322-23E921.08
intestine, neonate N06.CNhs11102.688-20B821.87
intestine, neonate N07.CNhs11095.720-20F220.89
intestine, neonate N10.CNhs11098.755-23A516.18
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E319.45
intestine, neonate N30.CNhs11131.1384-42G119.12
kidney, embryo E14.CNhs10606.411-4I961.26
kidney, embryo E15.CNhs10997.434-16F842.39
kidney, embryo E16.CNhs10584.464-22A536.07
kidney, embryo E17.CNhs11028.483-18I232.79
kidney, embryo E18.CNhs11001.1288-20C729.67
kidney, neonate N00.CNhs11214.646-21G733.10
kidney, neonate N10.CNhs11206.758-6D525.10
kidney, neonate N20.CNhs11113.832-19I116.38
kidney, neonate N25.CNhs11122.1353-25F315.54
kidney, neonate N30.CNhs11203.1385-42H113.94
liver, adult pregnant day01.CNhs10466.508-5B213.64
liver, embryo E12.CNhs10601.355-15F826.53
liver, embryo E13.CNhs10524.378-3H626.54
liver, embryo E14.CNhs10594.409-16E120.24
liver, embryo E15.CNhs10520.433-16D713.39
liver, embryo E16.CNhs10523.462-17F517.36
liver, embryo E17.CNhs10510.481-18A320.12
liver, embryo E18.CNhs10579.499-43G414.67
liver, neonate N00.CNhs11117.641-24F423.51
liver, neonate N03.CNhs11123.1345-25G214.00
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H221.21
liver, neonate N10.CNhs11115.751-24B915.29
liver, neonate N20.CNhs11220.823-25A314.14
liver, neonate N25.CNhs11198.1368-26H111.48
liver, neonate N30.CNhs11106.1382-42D116.40
lung, adult.CNhs10474.28-22B119.77
lung, embryo E12.CNhs10522.354-16G246.24
lung, embryo E14.CNhs10604.404-26F840.42
lung, embryo E15.CNhs11020.432-17C536.16
lung, embryo E16.CNhs10998.458-17B627.22
lung, embryo E17.CNhs10605.480-44A626.13
lung, embryo E18.CNhs10583.1287-20I626.18
lung, neonate N00.CNhs11224.640-42C631.03
lung, neonate N06.CNhs11212.683-20E528.22
lung, neonate N07.CNhs11111.715-19A326.35
lung, neonate N10.CNhs11219.750-23E625.99
lung, neonate N20.CNhs11109.822-18A416.06
lung, neonate N25.CNhs11119.1359-25C716.23
lung, neonate N30.CNhs11133.1394-42H217.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B611.31
mammary gland, adult pregnant day19.CNhs10476.588-5H214.90
medulla oblongata, adult.CNhs10477.17-12C224.08
medulla oblongata, neonate N30.CNhs11200.1396-42A321.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C732.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.38
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E143.54
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E237.09
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E350.84
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D750.42
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D839.66
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D953.78
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D450.60
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D542.67
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D647.04
olfactory brain, adult.CNhs10489.18-22I933.42
ovary, adult.CNhs10507.91-2I720.44
ovary, embryo E18.CNhs11040.505-44H722.79
ovary, neonate N00.CNhs11217.1299-22I425.25
oviduct, adult pregnant day01.CNhs10500.988-6G623.43
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F428.41
pancreas, embryo E15.CNhs11042.1556-45F224.79
pancreas, embryo E16.CNhs11003.460-26E519.05
pancreas, embryo E17.CNhs10599.1558-45G312.70
pancreas, embryo E18.CNhs10580.1535-43I715.37
pancreas, neonate N00.CNhs11105.645-26G921.45
pancreas, neonate N01.CNhs11138.1531-43D718.90
pancreas, neonate N02.CNhs11139.1539-43D816.40
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G831.32
pituitary gland, embryo E12.CNhs11018.346-16E643.39
pituitary gland, embryo E13.CNhs11009.370-44C738.68
pituitary gland, embryo E14.CNhs11037.398-44A536.65
pituitary gland, embryo E15.CNhs10592.427-16B939.90
pituitary gland, embryo E16.CNhs11036.449-43F638.88
pituitary gland, embryo E17.CNhs11039.1265-44F532.09
pituitary gland, neonate N00.CNhs11190.1308-22E926.49
placenta, adult pregnant day10.CNhs10472.539-13I721.82
placenta, adult pregnant day17.CNhs10464.577-18G315.25
prostate, adult.CNhs10470.859-1F813.45
skin, adult.CNhs10492.30-1C311.38
skin, neonate N00.CNhs11124.650-25G424.54
skin, neonate N03.CNhs11215.662-22H320.39
skin, neonate N06.CNhs11097.693-20I517.79
skin, neonate N10.CNhs11108.762-6C416.25
small intestine, neonate N16.CNhs11114.790-21I126.52
spinal cord, adult.CNhs10505.24-13C920.77
spleen, adult.CNhs10465.25-2G226.66
spleen, embryo E16.CNhs11035.461-43C127.24
spleen, embryo E18.CNhs11011.1271-21F225.74
spleen, neonate N10.CNhs11116.752-24D122.04
spleen, neonate N20.CNhs11112.824-19H130.07
spleen, neonate N25.CNhs11099.1354-25G327.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C639.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C948.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D344.50
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E346.50
stomach, embryo E15.CNhs10603.1252-16G830.29
stomach, embryo E16.CNhs11022.459-17D423.65
stomach, embryo E17.CNhs11006.1035-18D514.64
stomach, embryo E18.CNhs10999.1286-20C619.43
stomach, neonate N03.CNhs11193.1340-24B818.61
stomach, neonate N07.CNhs11210.718-18A918.18
stomach, neonate N25.CNhs11104.1355-25E415.97
stomach, neonate N30.CNhs11134.1386-42I114.65
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G543.40
testis, embryo E13.CNhs11031.389-23F530.95
testis, embryo E15.CNhs11034.443-27C522.01
testis, embryo E16.CNhs11033.470-26G521.39
testis, embryo E17.CNhs11029.486-18I520.54
testis, embryo E18.CNhs11027.503-18G516.56
testis, neonate N00.CNhs11189.1300-22B723.59
testis, neonate N07.CNhs11222.726-26I423.70
testis, neonate N10.CNhs11204.763-44D923.49
testis, neonate N20.CNhs11110.839-18H346.87
testis, neonate N30.CNhs11130.1391-42E231.11
thymus, adult.CNhs10471.38-12B5143.47
thymus, embryo E14.CNhs11041.402-44I443.18
thymus, embryo E15.CNhs11005.430-45I250.23
thymus, embryo E16.CNhs11002.456-26C564.70
thymus, embryo E17.CNhs10581.478-18C191.84
thymus, embryo E18.CNhs10595.1273-19G484.64
thymus, neonate N02.CNhs11181.1541-43F887.74
thymus, neonate N03.CNhs11137.2104-43C785.81
thymus, neonate N06.CNhs11197.681-26C491.37
thymus, neonate N07.CNhs11211.713-19D3113.01
thymus, neonate N10.CNhs11194.748-24E4114.14
thymus, neonate N20.CNhs11186.820-7A2125.82
thymus, neonate N25.CNhs11125.1362-25G7111.22
thymus, neonate N30.CNhs11132.1393-42G2123.54
tongue, adult.CNhs10499.32-1B415.42
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H321.09
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.98
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.63
urinary bladder, adult.CNhs10481.879-12E414.49
uterus, adult pregnant day19.CNhs10497.590-15F516.52
uterus, adult.CNhs10509.92-27E523.08
vagina, adult.CNhs10502.89-27D518.86
vesicular gland, adult.CNhs10491.51-27F813.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I861.75
whole body, embryo E12.CNhs10587.857-27C939.50
whole body, embryo E13.CNhs10512.372-23H237.90
whole body, embryo E14.5.CNhs10578.420-27D228.44
whole body, embryo E14.CNhs10519.395-14B136.68
whole body, embryo E16.CNhs10514.453-14F231.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G525.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G523.28
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G523.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G525.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.13
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.99
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.52
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G528.85
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G525.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G520.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G528.06
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G525.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.07
whole body, embryo E17.5.CNhs10513.490-9F926.43
whole body, embryo E17.CNhs10517.475-3I531.98
whole body, embryo E18.CNhs10516.493-3B323.39
whole body, neonate N00.CNhs10525.657-19C224.71
whole body, neonate N01.CNhs10576.659-23C622.95
whole body, neonate N06.CNhs10515.692-21D118.31
whole body, neonate N10.CNhs10518.761-6B422.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:129419477..129419512,-&oldid=900112"