FFCP PHASE1:Mm9::chr5:93238398..93238462,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:93238398..93238462,+ to FFCP PHASE1:Mm9::chr5:93238398..93238462,+: NSchange) |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|EntrezGene=27428 | |EntrezGene=27428 | ||
|HGNC= | |HGNC= | ||
|UniProt=Q9QXN0 | |UniProt=Q9QXN0 | ||
|association_with_transcript=0bp_to_ENSMUST00000113054,NM_001077595,uc008ydu.1_5end | |||
|description=CAGE_peak_1_at_Shroom3_5end | |||
|id=chr5:93238398..93238462,+ | |||
|ontology_enrichment_disease= | |||
|phase1_expression=3.68342348341026,79.9153683494137,87.3598539627909,75.3135886154007,79.1415253315229,48.0134717668005,47.6569786814872,0,0,0,0,0,0,0,0,0,0,0,0,0,13.351796553718,0,0,33.7584012094088,27.7585230091276,59.1458923038471,37.4762936658395,42.8787753044919,51.6863700921337,28.4794046628722,17.7384408524244,0,0,0,19.9307617628379,16.4572298904907,24.2961533952219,0,0,0,0,0,0,0,0,0,0,13.5175596955877,20.6505011770404,32.8586529435539,1.81982348112971,11.5002051491977,0,0,0,0.257259436035947,1.14613375975503,18.0485232297105,0.202316460859598,1.05798195854407,0,2.03306719241479,0.889294796111139,0,0,0,5.99200221036809,8.4528027170742,0,0,0,0.571301968807607,0.220868540951614,0.489963196859816,0.0958454710182364,0,0,1.53224805702225,0.614426133024974,0.791317726381163,0.274462930807229,0.52091337055676,0.558365998002762,0,0.45839474333043,0.294628585473668,0,0.186399445825301,0,0,42.8999443278483,0,0,0.539703191637817,0,0,8.00533194750986,0,0,0,7.32385782838739,0,0,0,6.71122227134764,7.85415582972806,5.56076889516262,11.0758363327488,0,0,0.520455980298408,0.913396434936424,0.922461989024234,0.301445281105245,1.17588707135705,0.251333182659351,47.7086287727342,1.59059292611903,0,1.13236794963186,0.220841518460394,0,50.325775528893,0.585561594023094,3.56059401582874,82.7680858875836,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0,0.511430914660661,1.0389402227978,0.973447578406546,4.48093200941392,8.21086006026614,21.4814344668623,20.8337437327609,1.69156575851515,1.37941262660084,1.0803727788321,2.10986744970001,1.15662048557257,1.0249097622788,0.937017245597288,14.4873887613849,0.431135985865684,2.83659120251729,2.28736461413134,2.41115305670332,0.834141747676794,3.1342694986995,1.85203922767149,4.17971960318836,0,0,0,8.28503090142008,15.4787199587523,9.36322719597277,17.0456209621351,15.7411385397923,10.3358965634543,19.9979192485351,23.8763327245661,42.9696459911184,35.8740472811387,24.132617219627,29.9954595319666,22.5147980635012,27.4437644113813,24.559774633148,0.841159794256509,1.23485534855141,171.487348368591,53.1545638993724,4.26576501070468,3.0190767341857,3.99489130098489,6.05050573870028,7.11609740303585,12.7451169495415,52.6727258314408,12.8465184684728,26.3901969240283,32.0319919986253,29.244613067868,49.4350674759822,53.1699602691748,50.5818834066093,3.79335801906163,6.62641373136427,13.5249282807697,11.4044743593376,13.1887691273986,17.7443624322506,33.5786012129806,37.1977572908597,34.3827213972611,31.5896739639809,1.48226313543574,0.667380422864376,0.196558995113203,0.224862112384854,0.405720242777006,1.20588579876208,1.01850340712568,2.01387296215567,0.972811360650212,0.823684239564244,4.31304619582064,4.46569137202204,1.5601883655728,1.76805214562978,1.4351793081753,0,62.2618250861458,3.03186258832776,7.65935389277522,7.97801903143384,11.4998221661366,27.4710262204578,27.6130623427776,51.9055503301745,38.9358805942292,32.5553093783699,25.5127629851979,46.5371813792696,43.5166154302057,49.469978034877,0,0,17.7035138286853,18.2118252561123,1.12385412991454,1.52375192569864,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,16.6069899693674,2.67098405500883,4.0721739838394,17.9817434040064,55.7529581027844,6.06951590387454,6.65111825322452,12.4479352638893,19.489924930131,19.6758494684114,26.6181141963268,19.9943551212628,21.746340081468,42.0328888054635,51.6551182017494,40.2228618667929,15.3197822589205,4.50152735078276,5.17434735131018,5.5727629108214,5.85222771019503,2.85390108163313,4.27827453565514,1.8267896946876,0.704015124191131,2.54198485036584,75.200183736742,0.65954501176592,1.13025098687134,0.784068024066026,1.19372344003136,1.47726809770555,48.6772997171851,1.29797711407357,0.341741761595705,3.92135049130123,2.40752885580625,0.565105371014073,0.683471138605126,0,0,0.139951452323658,0,65.8722726430428,4.9032079005076,4.67634774391752,4.10420295122845,8.57262013659322,18.3424553546789,23.4663962709588,27.5236007565369,52.61294433879,37.0698823614528,70.8326816919095,5.07323644815771,4.03694674318743,1.32366792365678,1.36115831840833,0.774958940866387,0.675824501963113,1.87771581833206,1.5624526181274,0.419437377702843,0.966336483304024,3.16833006883652,0.316011120628178,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,5.44152920676507,6.21560669447381,0.538283139656854,0.503653849092235,2.31827512838629,5.2551093126331,6.41030684935428,0.643105137237198,76.2389598133752,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0.453142408984205,0.51776031175182,1.3492355185943,1.59609949360412,3.24393850932855,3.40349403895612,3.98265008993166,1.83843508450014,5.11167473943715,4.53277125925567,8.66481865897901,3.53776096469316,4.56262739802432,4.71565853465191,5.43120743325318,4.1616349063165,4.93945033018274,6.19181798667996,5.2147946675185,3.8581844092741,3.70877310722976,6.03515572551029,6.17164654293748,4.96932257246145,4.76872379894642,5.23247099876383,4.14081273827455,5.16149108139227,4.93905526756486,6.83981249738391,5.16055632614275,4.48913817326191,4.03359061622192,3.84167481264697,3.27384834535751,3.25367366490529,3.66522560864169,2.49810577937946,5.14649538579898,7.73535794573874,2.29545998482612,2.20591419119516,0.463735671240843 | |phase1_expression=3.68342348341026,79.9153683494137,87.3598539627909,75.3135886154007,79.1415253315229,48.0134717668005,47.6569786814872,0,0,0,0,0,0,0,0,0,0,0,0,0,13.351796553718,0,0,33.7584012094088,27.7585230091276,59.1458923038471,37.4762936658395,42.8787753044919,51.6863700921337,28.4794046628722,17.7384408524244,0,0,0,19.9307617628379,16.4572298904907,24.2961533952219,0,0,0,0,0,0,0,0,0,0,13.5175596955877,20.6505011770404,32.8586529435539,1.81982348112971,11.5002051491977,0,0,0,0.257259436035947,1.14613375975503,18.0485232297105,0.202316460859598,1.05798195854407,0,2.03306719241479,0.889294796111139,0,0,0,5.99200221036809,8.4528027170742,0,0,0,0.571301968807607,0.220868540951614,0.489963196859816,0.0958454710182364,0,0,1.53224805702225,0.614426133024974,0.791317726381163,0.274462930807229,0.52091337055676,0.558365998002762,0,0.45839474333043,0.294628585473668,0,0.186399445825301,0,0,42.8999443278483,0,0,0.539703191637817,0,0,8.00533194750986,0,0,0,7.32385782838739,0,0,0,6.71122227134764,7.85415582972806,5.56076889516262,11.0758363327488,0,0,0.520455980298408,0.913396434936424,0.922461989024234,0.301445281105245,1.17588707135705,0.251333182659351,47.7086287727342,1.59059292611903,0,1.13236794963186,0.220841518460394,0,50.325775528893,0.585561594023094,3.56059401582874,82.7680858875836,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0,0.511430914660661,1.0389402227978,0.973447578406546,4.48093200941392,8.21086006026614,21.4814344668623,20.8337437327609,1.69156575851515,1.37941262660084,1.0803727788321,2.10986744970001,1.15662048557257,1.0249097622788,0.937017245597288,14.4873887613849,0.431135985865684,2.83659120251729,2.28736461413134,2.41115305670332,0.834141747676794,3.1342694986995,1.85203922767149,4.17971960318836,0,0,0,8.28503090142008,15.4787199587523,9.36322719597277,17.0456209621351,15.7411385397923,10.3358965634543,19.9979192485351,23.8763327245661,42.9696459911184,35.8740472811387,24.132617219627,29.9954595319666,22.5147980635012,27.4437644113813,24.559774633148,0.841159794256509,1.23485534855141,171.487348368591,53.1545638993724,4.26576501070468,3.0190767341857,3.99489130098489,6.05050573870028,7.11609740303585,12.7451169495415,52.6727258314408,12.8465184684728,26.3901969240283,32.0319919986253,29.244613067868,49.4350674759822,53.1699602691748,50.5818834066093,3.79335801906163,6.62641373136427,13.5249282807697,11.4044743593376,13.1887691273986,17.7443624322506,33.5786012129806,37.1977572908597,34.3827213972611,31.5896739639809,1.48226313543574,0.667380422864376,0.196558995113203,0.224862112384854,0.405720242777006,1.20588579876208,1.01850340712568,2.01387296215567,0.972811360650212,0.823684239564244,4.31304619582064,4.46569137202204,1.5601883655728,1.76805214562978,1.4351793081753,0,62.2618250861458,3.03186258832776,7.65935389277522,7.97801903143384,11.4998221661366,27.4710262204578,27.6130623427776,51.9055503301745,38.9358805942292,32.5553093783699,25.5127629851979,46.5371813792696,43.5166154302057,49.469978034877,0,0,17.7035138286853,18.2118252561123,1.12385412991454,1.52375192569864,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,16.6069899693674,2.67098405500883,4.0721739838394,17.9817434040064,55.7529581027844,6.06951590387454,6.65111825322452,12.4479352638893,19.489924930131,19.6758494684114,26.6181141963268,19.9943551212628,21.746340081468,42.0328888054635,51.6551182017494,40.2228618667929,15.3197822589205,4.50152735078276,5.17434735131018,5.5727629108214,5.85222771019503,2.85390108163313,4.27827453565514,1.8267896946876,0.704015124191131,2.54198485036584,75.200183736742,0.65954501176592,1.13025098687134,0.784068024066026,1.19372344003136,1.47726809770555,48.6772997171851,1.29797711407357,0.341741761595705,3.92135049130123,2.40752885580625,0.565105371014073,0.683471138605126,0,0,0.139951452323658,0,65.8722726430428,4.9032079005076,4.67634774391752,4.10420295122845,8.57262013659322,18.3424553546789,23.4663962709588,27.5236007565369,52.61294433879,37.0698823614528,70.8326816919095,5.07323644815771,4.03694674318743,1.32366792365678,1.36115831840833,0.774958940866387,0.675824501963113,1.87771581833206,1.5624526181274,0.419437377702843,0.966336483304024,3.16833006883652,0.316011120628178,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,5.44152920676507,6.21560669447381,0.538283139656854,0.503653849092235,2.31827512838629,5.2551093126331,6.41030684935428,0.643105137237198,76.2389598133752,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0.453142408984205,0.51776031175182,1.3492355185943,1.59609949360412,3.24393850932855,3.40349403895612,3.98265008993166,1.83843508450014,5.11167473943715,4.53277125925567,8.66481865897901,3.53776096469316,4.56262739802432,4.71565853465191,5.43120743325318,4.1616349063165,4.93945033018274,6.19181798667996,5.2147946675185,3.8581844092741,3.70877310722976,6.03515572551029,6.17164654293748,4.96932257246145,4.76872379894642,5.23247099876383,4.14081273827455,5.16149108139227,4.93905526756486,6.83981249738391,5.16055632614275,4.48913817326191,4.03359061622192,3.84167481264697,3.27384834535751,3.25367366490529,3.66522560864169,2.49810577937946,5.14649538579898,7.73535794573874,2.29545998482612,2.20591419119516,0.463735671240843 | ||
|short_description=p1@Shroom3 | |||
}} | }} | ||
Revision as of 18:50, 18 April 2012
| Short description: | p1@Shroom3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Shroom3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000113054, NM_001077595, uc008ydu.1_5end |
| EntrezGene: | Shroom3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
