Personal tools

FFCP PHASE1:Mm9::chr4:117852648..117852659,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_3_at_Kdm4a_5end
|description=CAGE_peak_3_at_Kdm4a_5end
|id=chr4:117852648..117852659,-
|id=chr4:117852648..117852659,-
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=2.08193501236232,0.348975407639361,0,0.90739263392049,0.500895729946347,1.17515490338323,0.934450562382103,0.516493293766305,0.140788722151667,0.234064526321993,1.02730780935303,0.8774937489487,0.856003649656029,0.874204024189974,1.33243904726265,3.03712901084739,1.39912375625629,2.5236973228659,1.37114433605739,2.12194825899015,1.44573593256819,1.29078236561151,1.04479915655574,1.11994695955385,0.45881856213434,0,0.430761996159075,0.861884930743556,0.950117097281869,0.252030129759931,0.443461021310609,3.81018404075779,1.23012957516914,0,0.866554859253824,0.831173226792462,1.02084678131185,2.09265815368454,0.7813353445238,1.57057123192139,3.52938892818609,2.04913645487534,1.94204141212461,1.38486499773135,1.11514624341466,1.10128051297009,0,1.74420125104357,1.09843091367236,1.36100929351998,1.25987779462826,0,1.67782606057736,1.45072428402269,1.00828139742739,1.02903774414379,0.573066879877513,1.03134418455488,2.83243045203437,1.05798195854407,0.633831403506179,1.35537812827653,1.77858959222228,0.449949858640699,0,0.7104801149461,0.299600110518405,0.768436610643109,1.8664130215526,2.02508907497536,1.47227472945967,0,0.441737081903227,3.06226998037385,3.83381884072945,4.5960939330501,0,0.638436690425939,0.614426133024974,1.71452174049252,3.20206752608434,1.56274011167028,0.558365998002762,0.56276261003168,0.61119299110724,2.65165726926301,1.42371680799103,2.79599168737951,0.530083353332288,0.755715601067855,0.869593466105033,0,0,0.539703191637817,3.24888208723835,0.896053774194671,0.280888840263504,0.681721290312231,0,0.70667914902068,2.11265129665021,0,2.54805239706646,0,1.73192832808971,0.506719730950197,0.505524445014783,0.5709193985953,1.55362730188303,1.33597925158342,1.04091196059682,0.608930956624282,1.38369298353635,1.65794904607885,1.64624189989987,0.628332956648377,1.48316980640624,0.289198713839823,0,1.13236794963186,1.32504911076236,2.90925151881133,0,0.585561594023094,0.209446706813455,1.27728527604296,1.07833612055328,1.19980546198682,0.762421362438388,0,0.457500602818626,1.13088916901578,0.173824320192276,0,0.41557608911912,0.811206315338788,1.01839363850316,1.24406970610093,2.52722758433675,0.631325567659422,3.12289063110489,1.37941262660084,2.52086981727489,2.71268672104287,3.06164246180975,3.45907044769094,3.65436725782942,1.81092359517311,4.52692785158969,4.53854592402766,3.51902248327898,1.53437012699302,1.94633074457919,1.0447564995665,1.64625709126355,1.39323986772945,0.702213187313235,0.772043721344145,0.284163499395593,2.69263504296152,1.87620847984877,2.52086886045421,1.65721314909647,3.14822770795846,1.07986979021165,1.16266972375204,1.07309360559848,0.817357396570186,1.15191894939436,0.32833492815819,0.648550476366846,1.46199987425332,1.53685080703735,0.402619256281115,0.420579897128254,0.823236899034275,0.660837565967596,0,3.19932375802851,1.62565670302307,3.09281907173024,2.21851877085677,2.44615848229357,1.33157938278791,1.42358718463353,0.823494773620054,1.00534083520108,0.795825888164603,0.974820435595601,0.898819408654221,1.29682829924817,0.796565093017469,2.0863469104839,2.39921876480431,2.25415471346161,2.8511185898344,1.35766741017338,1.33258057791605,2.02356918797623,1.18088118383682,0.941992367048249,0.740382983530803,1.1858105083486,0.83422552858047,1.57247196090562,2.47348323623339,1.82574109249653,1.20588579876208,1.01850340712568,2.5892652370573,1.62135226775035,1.09824565275233,0,0,1.87222603868736,0.505157755894224,1.61457672169721,0.482443521363367,1.29327233116623,2.27389694124582,3.42226450528254,2.71592137240301,3.52035372432753,2.34508760418542,3.33261097240419,1.56106918286239,1.26108115284953,1.7717175171902,2.71073106717728,0.327726629431476,1.72684981865896,3.03763023021174,1.50791283939272,0.54390568381871,0.491764273019036,0.551873492609465,0.321101179975584,0.586058432961016,1.14754461763673,0.252470927204373,2.52406575533005,2.73307121007647,3.01592756825919,1.43381278771531,2.67358408898873,2.83076530788832,2.42886421004937,2.63030272120181,2.37172666767914,1.28528526568723,1.13552068166615,0.890328018336276,1.30309567482861,1.15479086080775,2.65490276679926,2.6705869977048,1.51161778482376,2.45186603682668,1.18120757152309,0.307435147943927,1.03371317267288,0.727067458955011,1.42598951353889,0.316036757935816,0,3.09406629744561,3.40439605753788,3.78128297465751,2.58717367565509,2.14337035031592,2.48276327099183,2.31879462882692,0.822745103010605,1.8267896946876,0.704015124191131,0.21183207086382,0.882113592219848,0.8244312647074,1.45317984026315,1.02531972377865,0.716234064018819,0.656563598980245,0.291480836629851,0.927126510052548,2.05045056957423,1.44470807574256,1.11116716421827,2.26042148405629,2.05041341581538,2.51655990527175,1.01987057996313,1.11961161858926,1.38199973804424,0,2.05618395827738,2.84647253977588,1.83609079397062,2.71814784818809,1.74690050996942,0.809186078308924,1.40510874733071,0.26175594198403,1.03691978633434,1.24267862617385,0.56369293868419,3.43888055901151,1.65458490457098,1.94451188344048,1.93739735216597,2.02747350588934,0.938857909166032,0.39061315453185,1.15345278868282,0.241584120826006,0.864090018773596,3.47612232690996,1.21635129174099,2.46506297195585,1.68897069871134,3.04345382634718,2.38417625737518,2.40390899039938,2.95379054349154,3.33189284828887,3.12447907285499,2.62148081355785,2.72882066071307,2.88635524920988,4.55819918508119,0.680191150845634,0.221985953374065,0.62799699626633,0.503653849092235,1.15913756419314,0.563047426353546,1.46521299413812,1.07184189539533,0.501572104035363,0,0.920650473014354,0,0.68741272937475,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0,0,3.84013186061454,0.798049746802062,1.70733605754134,1.45864030240976,2.30574478890781,1.2869045591501,1.55572709461131,1.44224540067226,1.28367683836726,1.26348605881899,0.760437899670719,1.32038438970253,1.12369808963859,1.28050304809739,1.49332219284595,3.33405583898152,1.50649623728312,1.54327376370964,1.23625770240992,2.20798380201596,0.685738504770831,1.77475806159337,0.715308569841963,1.45346416632329,1.69396884747595,1.69229215783353,1.46342378298218,0.263069711437843,2.17286582153379,0,1.30498519936592,1.28055827088233,0.818462086339379,1.23949472948773,1.54325288784913,2.24829520144151,0.467863216890817,0.429742108096597,1.53030665655075,0.661774257358546,1.39120701372253
|phase1_expression=2.08193501236232,0.348975407639361,0,0.90739263392049,0.500895729946347,1.17515490338323,0.934450562382103,0.516493293766305,0.140788722151667,0.234064526321993,1.02730780935303,0.8774937489487,0.856003649656029,0.874204024189974,1.33243904726265,3.03712901084739,1.39912375625629,2.5236973228659,1.37114433605739,2.12194825899015,1.44573593256819,1.29078236561151,1.04479915655574,1.11994695955385,0.45881856213434,0,0.430761996159075,0.861884930743556,0.950117097281869,0.252030129759931,0.443461021310609,3.81018404075779,1.23012957516914,0,0.866554859253824,0.831173226792462,1.02084678131185,2.09265815368454,0.7813353445238,1.57057123192139,3.52938892818609,2.04913645487534,1.94204141212461,1.38486499773135,1.11514624341466,1.10128051297009,0,1.74420125104357,1.09843091367236,1.36100929351998,1.25987779462826,0,1.67782606057736,1.45072428402269,1.00828139742739,1.02903774414379,0.573066879877513,1.03134418455488,2.83243045203437,1.05798195854407,0.633831403506179,1.35537812827653,1.77858959222228,0.449949858640699,0,0.7104801149461,0.299600110518405,0.768436610643109,1.8664130215526,2.02508907497536,1.47227472945967,0,0.441737081903227,3.06226998037385,3.83381884072945,4.5960939330501,0,0.638436690425939,0.614426133024974,1.71452174049252,3.20206752608434,1.56274011167028,0.558365998002762,0.56276261003168,0.61119299110724,2.65165726926301,1.42371680799103,2.79599168737951,0.530083353332288,0.755715601067855,0.869593466105033,0,0,0.539703191637817,3.24888208723835,0.896053774194671,0.280888840263504,0.681721290312231,0,0.70667914902068,2.11265129665021,0,2.54805239706646,0,1.73192832808971,0.506719730950197,0.505524445014783,0.5709193985953,1.55362730188303,1.33597925158342,1.04091196059682,0.608930956624282,1.38369298353635,1.65794904607885,1.64624189989987,0.628332956648377,1.48316980640624,0.289198713839823,0,1.13236794963186,1.32504911076236,2.90925151881133,0,0.585561594023094,0.209446706813455,1.27728527604296,1.07833612055328,1.19980546198682,0.762421362438388,0,0.457500602818626,1.13088916901578,0.173824320192276,0,0.41557608911912,0.811206315338788,1.01839363850316,1.24406970610093,2.52722758433675,0.631325567659422,3.12289063110489,1.37941262660084,2.52086981727489,2.71268672104287,3.06164246180975,3.45907044769094,3.65436725782942,1.81092359517311,4.52692785158969,4.53854592402766,3.51902248327898,1.53437012699302,1.94633074457919,1.0447564995665,1.64625709126355,1.39323986772945,0.702213187313235,0.772043721344145,0.284163499395593,2.69263504296152,1.87620847984877,2.52086886045421,1.65721314909647,3.14822770795846,1.07986979021165,1.16266972375204,1.07309360559848,0.817357396570186,1.15191894939436,0.32833492815819,0.648550476366846,1.46199987425332,1.53685080703735,0.402619256281115,0.420579897128254,0.823236899034275,0.660837565967596,0,3.19932375802851,1.62565670302307,3.09281907173024,2.21851877085677,2.44615848229357,1.33157938278791,1.42358718463353,0.823494773620054,1.00534083520108,0.795825888164603,0.974820435595601,0.898819408654221,1.29682829924817,0.796565093017469,2.0863469104839,2.39921876480431,2.25415471346161,2.8511185898344,1.35766741017338,1.33258057791605,2.02356918797623,1.18088118383682,0.941992367048249,0.740382983530803,1.1858105083486,0.83422552858047,1.57247196090562,2.47348323623339,1.82574109249653,1.20588579876208,1.01850340712568,2.5892652370573,1.62135226775035,1.09824565275233,0,0,1.87222603868736,0.505157755894224,1.61457672169721,0.482443521363367,1.29327233116623,2.27389694124582,3.42226450528254,2.71592137240301,3.52035372432753,2.34508760418542,3.33261097240419,1.56106918286239,1.26108115284953,1.7717175171902,2.71073106717728,0.327726629431476,1.72684981865896,3.03763023021174,1.50791283939272,0.54390568381871,0.491764273019036,0.551873492609465,0.321101179975584,0.586058432961016,1.14754461763673,0.252470927204373,2.52406575533005,2.73307121007647,3.01592756825919,1.43381278771531,2.67358408898873,2.83076530788832,2.42886421004937,2.63030272120181,2.37172666767914,1.28528526568723,1.13552068166615,0.890328018336276,1.30309567482861,1.15479086080775,2.65490276679926,2.6705869977048,1.51161778482376,2.45186603682668,1.18120757152309,0.307435147943927,1.03371317267288,0.727067458955011,1.42598951353889,0.316036757935816,0,3.09406629744561,3.40439605753788,3.78128297465751,2.58717367565509,2.14337035031592,2.48276327099183,2.31879462882692,0.822745103010605,1.8267896946876,0.704015124191131,0.21183207086382,0.882113592219848,0.8244312647074,1.45317984026315,1.02531972377865,0.716234064018819,0.656563598980245,0.291480836629851,0.927126510052548,2.05045056957423,1.44470807574256,1.11116716421827,2.26042148405629,2.05041341581538,2.51655990527175,1.01987057996313,1.11961161858926,1.38199973804424,0,2.05618395827738,2.84647253977588,1.83609079397062,2.71814784818809,1.74690050996942,0.809186078308924,1.40510874733071,0.26175594198403,1.03691978633434,1.24267862617385,0.56369293868419,3.43888055901151,1.65458490457098,1.94451188344048,1.93739735216597,2.02747350588934,0.938857909166032,0.39061315453185,1.15345278868282,0.241584120826006,0.864090018773596,3.47612232690996,1.21635129174099,2.46506297195585,1.68897069871134,3.04345382634718,2.38417625737518,2.40390899039938,2.95379054349154,3.33189284828887,3.12447907285499,2.62148081355785,2.72882066071307,2.88635524920988,4.55819918508119,0.680191150845634,0.221985953374065,0.62799699626633,0.503653849092235,1.15913756419314,0.563047426353546,1.46521299413812,1.07184189539533,0.501572104035363,0,0.920650473014354,0,0.68741272937475,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0,0,3.84013186061454,0.798049746802062,1.70733605754134,1.45864030240976,2.30574478890781,1.2869045591501,1.55572709461131,1.44224540067226,1.28367683836726,1.26348605881899,0.760437899670719,1.32038438970253,1.12369808963859,1.28050304809739,1.49332219284595,3.33405583898152,1.50649623728312,1.54327376370964,1.23625770240992,2.20798380201596,0.685738504770831,1.77475806159337,0.715308569841963,1.45346416632329,1.69396884747595,1.69229215783353,1.46342378298218,0.263069711437843,2.17286582153379,0,1.30498519936592,1.28055827088233,0.818462086339379,1.23949472948773,1.54325288784913,2.24829520144151,0.467863216890817,0.429742108096597,1.53030665655075,0.661774257358546,1.39120701372253
|short_description=p3@Kdm4a
|short_description=p3@Kdm4a
}}
}}

Revision as of 20:13, 18 April 2012

Short description:p3@Kdm4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Kdm4a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000106406, NM_001161823, NM_172382, uc008ujn.2, uc008ujo.2, uc008ujp.2_5end
EntrezGene:Kdm4a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Kdm4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C63.06
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E24.53
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C43.33
thymus, neonate N07.CNhs11211.713-19D33.12
thymus, neonate N10.CNhs11194.748-24E42.62
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G24.56
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:117852648..117852659,-&oldid=947087"