Personal tools

FFCP PHASE1:Mm9::chr4:40186812..40186864,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Ddx58_5end
|description=CAGE_peak_1_at_Ddx58_5end
|id=chr4:40186812..40186864,-
|id=chr4:40186812..40186864,-
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=6.72625157840135,18.8446720125255,19.5649672937501,45.0671674847177,41.0734498556005,6.88305014838748,10.5125688267987,48.9377395843574,9.01047821770667,8.19225842126977,2.56826952338257,0.957265907944037,83.5459562064284,76.1431705069467,12.6581709489952,18.0202987976945,4.89693314689703,64.6697438984387,74.0417941470989,50.9267582157636,18.6244805430843,11.2198774857,15.4107875591972,15.9992422793407,15.3704218315004,22.9692785646008,10.7690499039769,14.4365725899546,37.0545667939929,46.1215137460673,11.9734475753865,0.635030673459631,0,0,6.64358725427932,6.64938581433969,6.94175811292055,78.2654149478017,52.3494680830946,89.5225602195195,89.9994176687452,83.3315491649304,74.7685943667977,39.6574976623068,31.8323564029276,23.1268907723719,21.9069576417451,3.48840250208714,10.1055644057857,10.8880743481599,17.778275546421,0,33.5565212115473,38.4441935266013,37.642505503956,39.1034342774639,29.7994777536307,35.5813743671435,0.404632921719196,0,0.633831403506179,6.77689064138264,16.0073063300005,10.3488467487361,9.88866362566974,7.8152812644071,4.19440154725767,2.30530983192933,1.14058573539325,0.675029691658453,0.630974884054146,2.28520787523043,1.98781686856452,0.367472397644862,0.862609239164127,0.919218786610021,2.20231761998777,3.19218345212969,2.15049146558741,0.395658863190582,0.457438218012048,0,3.90856198601933,4.50210088025344,3.81995619442025,4.71405736757868,2.56269025438385,0.745597783301202,25.5954533466162,30.7576249634617,40.0012994408315,34.4169550792555,3.39985666853875,16.1910957491345,31.1892680374881,22.8493712419641,20.2239964989723,16.8726019352277,11.4305842025262,7.0667914902068,5.49289337129054,19.2489716121477,10.1922095882658,7.11066703153331,5.84525810730278,7.34743609877786,5.56076889516262,25.8055568165076,84.9316258362723,33.2510391505207,4.16364784238726,12.4830846107978,14.0675453326196,32.5560903593665,24.9288059127694,30.2856485104518,47.9558237404685,39.7648231529757,24.7690954545965,10.8383789464764,15.2380647737672,14.0613823409214,14.9113408974498,3.22058876712702,1.25668024088073,33.4648742323255,4.31334448221313,1.79970819298022,3.43089613097275,3.14560342750128,5.03250663100489,1.25654352112864,3.65031072403781,2.81287003063364,4.77912502486988,3.0825839982874,12.7299204812895,20.029522268225,19.9650979162603,20.2024181651015,2.73252930221678,1.60931473103431,3.42118046630164,4.82255417074288,5.23881043465224,6.53379973452734,3.5606655332697,10.0894314588216,3.88022387279116,5.29497024469894,4.39877810409872,6.79506770525482,7.50727572909114,9.05455632957633,11.7295817752528,7.36426787228425,0,2.83082697826187,1.98914449576915,2.89976081549703,7.50483391939508,8.64297895012871,9.2330446878232,9.83821158737019,9.41029388613007,13.4869687955237,13.1453966685813,12.4938916332871,8.55711219550098,12.3125598059321,16.5380371473546,16.2281986042119,20.6377108373588,15.5679445762031,4.20579897128254,2.05809224758569,65.7533378137758,58.9724763659704,3.41261200856374,5.57368012465052,5.02583099156164,12.5043785266472,17.5678654637448,35.1917408308234,43.6566736620951,45.951008367999,38.7056221552415,44.1683367931355,41.5273505563726,51.2327062932906,43.2276099749388,34.8497228195143,3.60369011810855,5.36968009265725,5.63538678365402,8.5533557695032,16.8738663835834,14.307707257625,17.9591765432891,21.8463019009811,25.5907926381441,20.2371348831753,18.3800628794032,3.50374722003798,4.52085688760367,6.52100125916076,8.92584534109413,9.64708639009667,11.9674150337267,35.3866249064497,19.7804976665543,23.0631587077988,31.629005436018,25.3055844414582,36.5084077544036,32.8352541331245,37.4940594260796,17.3679667690812,48.0358294433172,3.7898282354097,5.0519142697028,7.1292936025579,10.0916806764056,16.5831194867398,26.6608877792335,26.5381761086606,28.059055650902,27.9045508957456,29.1802226643201,42.9321884555234,39.717545829156,43.6840156916165,60.3165135757089,97.359117403549,16.7199852826472,21.7990029580739,4.81651769963376,3.6335622843583,9.3442918864705,9.08895337935743,4.73262329124385,6.63745865304285,2.36965737506079,8.84184552424442,8.24355094104858,5.09537755419898,4.85772842009873,4.38383786866968,5.53402889125133,4.17717711348349,18.7360912474915,11.2181330310371,11.5649741141039,32.4991142255895,5.30980553359851,5.34117399540959,4.83717691143602,6.60117779145643,5.31543407185391,13.8345816574767,25.5844010236539,10.9060118843252,12.83390562185,11.6933600436252,10.5418608574999,7.21948802737308,12.9367050186439,4.68158844481407,6.07985813778946,5.78709994585299,7.44828981297549,8.20496560969525,7.73380396829969,7.91608867697958,25.5792161789444,30.5038182043901,9.70324951441832,13.3557864882599,13.2400829890643,10.072258463002,8.8335534562321,7.05805868903763,44.3050871677373,5.00648315428376,20.6753765765402,9.70018279427146,37.7796835834212,12.0555812483002,25.2884321283897,28.3684934776088,25.3267860690844,23.7917468950219,23.7703954943609,12.4107180341965,2.37251995185852,9.96265388921559,11.0165447638237,11.7089445768102,12.8833912610245,10.9240120571705,15.7868100435392,9.42321391142507,14.6464919819726,13.0481255748254,2.81846469342095,6.87776111802302,9.92750942742586,5.63908446197738,10.074466231263,14.8681390431885,11.2662949099924,5.33837977860195,5.45268591013696,3.14059357073808,3.45636007509439,22.4367895646007,10.5417111950885,12.0171819882848,15.9802612262688,13.6060288707286,14.9011016085949,18.2697083270353,15.6550898805052,18.2749274406147,19.280322083715,19.8627584719576,26.8983750841717,24.3415959350034,28.9854717410291,8.84248496099324,6.21560669447381,3.49884040776955,3.69346156000973,25.1146472241848,33.4074806303104,42.6743284542728,14.3626813982974,17.5550236412377,0.564751842617067,2.30162618253588,3.43737308063638,2.92150409984269,1.37016503954128,3.0215755895588,3.37511250115903,1.35096360967266,0.453142408984205,3.10656187051092,2.80225838477277,4.78829848081237,2.04880326904961,8.99494853152688,5.44994222832754,7.72142735490059,8.66762238426299,11.1258930909003,11.8740107548972,8.33900798820532,14.7017993936339,10.3744487762342,11.3306224038558,11.0123262136375,11.8891420738119,10.0021675169445,8.34367146802959,8.87382414133043,8.24171801606613,10.1567254892734,8.57173130963539,12.0683548188349,12.1602456873134,9.59286349773368,11.4813444106703,9.30760686808441,8.96347067076586,13.41655528333,11.5433496768983,7.2948495315506,9.37216643180976,8.86540341380071,7.7753898202241,10.6906420418317,7.33045121728337,5.9954538705107,15.6734177658424,14.8261027293326,8.03410994689142,9.48543102213917,11.1296561097802
|phase1_expression=6.72625157840135,18.8446720125255,19.5649672937501,45.0671674847177,41.0734498556005,6.88305014838748,10.5125688267987,48.9377395843574,9.01047821770667,8.19225842126977,2.56826952338257,0.957265907944037,83.5459562064284,76.1431705069467,12.6581709489952,18.0202987976945,4.89693314689703,64.6697438984387,74.0417941470989,50.9267582157636,18.6244805430843,11.2198774857,15.4107875591972,15.9992422793407,15.3704218315004,22.9692785646008,10.7690499039769,14.4365725899546,37.0545667939929,46.1215137460673,11.9734475753865,0.635030673459631,0,0,6.64358725427932,6.64938581433969,6.94175811292055,78.2654149478017,52.3494680830946,89.5225602195195,89.9994176687452,83.3315491649304,74.7685943667977,39.6574976623068,31.8323564029276,23.1268907723719,21.9069576417451,3.48840250208714,10.1055644057857,10.8880743481599,17.778275546421,0,33.5565212115473,38.4441935266013,37.642505503956,39.1034342774639,29.7994777536307,35.5813743671435,0.404632921719196,0,0.633831403506179,6.77689064138264,16.0073063300005,10.3488467487361,9.88866362566974,7.8152812644071,4.19440154725767,2.30530983192933,1.14058573539325,0.675029691658453,0.630974884054146,2.28520787523043,1.98781686856452,0.367472397644862,0.862609239164127,0.919218786610021,2.20231761998777,3.19218345212969,2.15049146558741,0.395658863190582,0.457438218012048,0,3.90856198601933,4.50210088025344,3.81995619442025,4.71405736757868,2.56269025438385,0.745597783301202,25.5954533466162,30.7576249634617,40.0012994408315,34.4169550792555,3.39985666853875,16.1910957491345,31.1892680374881,22.8493712419641,20.2239964989723,16.8726019352277,11.4305842025262,7.0667914902068,5.49289337129054,19.2489716121477,10.1922095882658,7.11066703153331,5.84525810730278,7.34743609877786,5.56076889516262,25.8055568165076,84.9316258362723,33.2510391505207,4.16364784238726,12.4830846107978,14.0675453326196,32.5560903593665,24.9288059127694,30.2856485104518,47.9558237404685,39.7648231529757,24.7690954545965,10.8383789464764,15.2380647737672,14.0613823409214,14.9113408974498,3.22058876712702,1.25668024088073,33.4648742323255,4.31334448221313,1.79970819298022,3.43089613097275,3.14560342750128,5.03250663100489,1.25654352112864,3.65031072403781,2.81287003063364,4.77912502486988,3.0825839982874,12.7299204812895,20.029522268225,19.9650979162603,20.2024181651015,2.73252930221678,1.60931473103431,3.42118046630164,4.82255417074288,5.23881043465224,6.53379973452734,3.5606655332697,10.0894314588216,3.88022387279116,5.29497024469894,4.39877810409872,6.79506770525482,7.50727572909114,9.05455632957633,11.7295817752528,7.36426787228425,0,2.83082697826187,1.98914449576915,2.89976081549703,7.50483391939508,8.64297895012871,9.2330446878232,9.83821158737019,9.41029388613007,13.4869687955237,13.1453966685813,12.4938916332871,8.55711219550098,12.3125598059321,16.5380371473546,16.2281986042119,20.6377108373588,15.5679445762031,4.20579897128254,2.05809224758569,65.7533378137758,58.9724763659704,3.41261200856374,5.57368012465052,5.02583099156164,12.5043785266472,17.5678654637448,35.1917408308234,43.6566736620951,45.951008367999,38.7056221552415,44.1683367931355,41.5273505563726,51.2327062932906,43.2276099749388,34.8497228195143,3.60369011810855,5.36968009265725,5.63538678365402,8.5533557695032,16.8738663835834,14.307707257625,17.9591765432891,21.8463019009811,25.5907926381441,20.2371348831753,18.3800628794032,3.50374722003798,4.52085688760367,6.52100125916076,8.92584534109413,9.64708639009667,11.9674150337267,35.3866249064497,19.7804976665543,23.0631587077988,31.629005436018,25.3055844414582,36.5084077544036,32.8352541331245,37.4940594260796,17.3679667690812,48.0358294433172,3.7898282354097,5.0519142697028,7.1292936025579,10.0916806764056,16.5831194867398,26.6608877792335,26.5381761086606,28.059055650902,27.9045508957456,29.1802226643201,42.9321884555234,39.717545829156,43.6840156916165,60.3165135757089,97.359117403549,16.7199852826472,21.7990029580739,4.81651769963376,3.6335622843583,9.3442918864705,9.08895337935743,4.73262329124385,6.63745865304285,2.36965737506079,8.84184552424442,8.24355094104858,5.09537755419898,4.85772842009873,4.38383786866968,5.53402889125133,4.17717711348349,18.7360912474915,11.2181330310371,11.5649741141039,32.4991142255895,5.30980553359851,5.34117399540959,4.83717691143602,6.60117779145643,5.31543407185391,13.8345816574767,25.5844010236539,10.9060118843252,12.83390562185,11.6933600436252,10.5418608574999,7.21948802737308,12.9367050186439,4.68158844481407,6.07985813778946,5.78709994585299,7.44828981297549,8.20496560969525,7.73380396829969,7.91608867697958,25.5792161789444,30.5038182043901,9.70324951441832,13.3557864882599,13.2400829890643,10.072258463002,8.8335534562321,7.05805868903763,44.3050871677373,5.00648315428376,20.6753765765402,9.70018279427146,37.7796835834212,12.0555812483002,25.2884321283897,28.3684934776088,25.3267860690844,23.7917468950219,23.7703954943609,12.4107180341965,2.37251995185852,9.96265388921559,11.0165447638237,11.7089445768102,12.8833912610245,10.9240120571705,15.7868100435392,9.42321391142507,14.6464919819726,13.0481255748254,2.81846469342095,6.87776111802302,9.92750942742586,5.63908446197738,10.074466231263,14.8681390431885,11.2662949099924,5.33837977860195,5.45268591013696,3.14059357073808,3.45636007509439,22.4367895646007,10.5417111950885,12.0171819882848,15.9802612262688,13.6060288707286,14.9011016085949,18.2697083270353,15.6550898805052,18.2749274406147,19.280322083715,19.8627584719576,26.8983750841717,24.3415959350034,28.9854717410291,8.84248496099324,6.21560669447381,3.49884040776955,3.69346156000973,25.1146472241848,33.4074806303104,42.6743284542728,14.3626813982974,17.5550236412377,0.564751842617067,2.30162618253588,3.43737308063638,2.92150409984269,1.37016503954128,3.0215755895588,3.37511250115903,1.35096360967266,0.453142408984205,3.10656187051092,2.80225838477277,4.78829848081237,2.04880326904961,8.99494853152688,5.44994222832754,7.72142735490059,8.66762238426299,11.1258930909003,11.8740107548972,8.33900798820532,14.7017993936339,10.3744487762342,11.3306224038558,11.0123262136375,11.8891420738119,10.0021675169445,8.34367146802959,8.87382414133043,8.24171801606613,10.1567254892734,8.57173130963539,12.0683548188349,12.1602456873134,9.59286349773368,11.4813444106703,9.30760686808441,8.96347067076586,13.41655528333,11.5433496768983,7.2948495315506,9.37216643180976,8.86540341380071,7.7753898202241,10.6906420418317,7.33045121728337,5.9954538705107,15.6734177658424,14.8261027293326,8.03410994689142,9.48543102213917,11.1296561097802
|short_description=p1@Ddx58
|short_description=p1@Ddx58
}}
}}

Revision as of 21:17, 18 April 2012

Short description:p1@Ddx58
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ddx58_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000037907, ENSMUST00000108111, ENSMUST00000149539, NM_172689, uc008shf.1, uc008shg.1, uc008shh.1, uc012dbu.1_5end
EntrezGene:Ddx58
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ddx58

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I518.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I619.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I345.07
CD326+ enterocyte, pool2.CNhs13197.11849-124I441.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.51
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E948.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E483.55
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E876.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A318.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A264.67
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A474.04
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A650.93
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.22
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I915.41
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.37
GP2+ M cell, pool1.CNhs13228.11845-124H922.97
GP2+ M cell, pool2.CNhs13231.11846-124I110.77
GP2+ M cell, pool3.CNhs13240.11847-124I214.44
Ileum epithelium, pool1.CNhs13199.10252-104B937.05
Ileum epithelium, pool2.CNhs13232.10253-104C146.12
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.64
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G878.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H152.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H389.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G990.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H283.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H474.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D839.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D931.83
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B323.13
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.11
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A233.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I938.44
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A137.64
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C139.10
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E129.80
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C535.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D925.60
Mouse Schwann, donor2.CNhs12573.11746-123F930.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G340.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F734.42
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C816.19
Mouse hepatocyte, donor6.CNhs13090.11822-124F431.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F622.85
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B625.81
accessory axillary lymph node, adult.CNhs10475.1063-29H984.93
adrenal gland, adult.CNhs10508.49-24D733.25
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D612.48
adrenal gland, embryo E17.CNhs11043.1263-45I114.07
adrenal gland, embryo E18.CNhs11026.1262-18F532.56
adrenal gland, neonate N00.CNhs11191.1311-23C124.93
adrenal gland, neonate N25.CNhs11223.1377-27I330.29
amnion, adult pregnant day17.5.CNhs10488.583-22A847.96
aorta, adult.CNhs10498.46-23H139.76
bone (os femoris), adult.CNhs10483.56-12G224.77
bone (os femoris), neonate N02.CNhs11227.1985-43F510.84
bone (os femoris), neonate N16.CNhs11225.1525-43A615.24
bone (os femoris), neonate N20.CNhs11195.1350-25C314.06
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H733.46
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.31
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.43
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.03
epididymis, adult.CNhs10490.58-23B219.97
eyeball, adult.CNhs10484.31-12G420.20
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C65.24
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A210.09
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C49.05
forelimb, embryo E18.CNhs11008.1520-43B511.73
gonad, embryo E13.CNhs11044.1564-45I67.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F57.50
heart, embryo E13.CNhs11013.376-3I98.64
heart, embryo E14.CNhs10597.403-26D49.23
heart, embryo E15.CNhs11017.431-16C89.84
heart, embryo E16.CNhs11021.457-17C69.41
heart, embryo E17.CNhs11025.479-18E513.49
heart, embryo E18.CNhs11030.1283-20G313.15
heart, neonate N00.CNhs11213.639-21E312.49
heart, neonate N03.CNhs11221.1349-25I28.56
heart, neonate N10.CNhs11118.749-24G112.31
heart, neonate N16.CNhs11209.782-15G116.54
heart, neonate N20.CNhs11127.821-26I616.23
heart, neonate N25.CNhs11196.1351-25D320.64
heart, neonate N30.CNhs11202.1390-42D215.57
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I365.75
intestine, adult.CNhs10496.178-9A358.97
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D85.03
intestine, embryo E16.CNhs10585.463-22H412.50
intestine, embryo E17.CNhs10582.482-18D317.57
intestine, embryo E18.CNhs10526.1289-20F735.19
intestine, neonate N00.CNhs11126.644-26D143.66
intestine, neonate N01.CNhs11192.1322-23E945.95
intestine, neonate N06.CNhs11102.688-20B838.71
intestine, neonate N07.CNhs11095.720-20F244.17
intestine, neonate N10.CNhs11098.755-23A541.53
intestine, neonate N20.CNhs11187.827-18D151.23
intestine, neonate N25.CNhs11121.1352-25E343.23
intestine, neonate N30.CNhs11131.1384-42G134.85
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F85.37
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I28.55
kidney, embryo E18.CNhs11001.1288-20C716.87
kidney, neonate N00.CNhs11214.646-21G714.31
kidney, neonate N10.CNhs11206.758-6D517.96
kidney, neonate N20.CNhs11113.832-19I121.85
kidney, neonate N25.CNhs11122.1353-25F325.59
kidney, neonate N30.CNhs11203.1385-42H120.24
liver, adult pregnant day01.CNhs10466.508-5B218.38
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E16.52
liver, embryo E15.CNhs10520.433-16D78.93
liver, embryo E16.CNhs10523.462-17F59.65
liver, embryo E17.CNhs10510.481-18A311.97
liver, embryo E18.CNhs10579.499-43G435.39
liver, neonate N00.CNhs11117.641-24F419.78
liver, neonate N03.CNhs11123.1345-25G223.06
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H225.31
liver, neonate N10.CNhs11115.751-24B936.51
liver, neonate N20.CNhs11220.823-25A332.84
liver, neonate N25.CNhs11198.1368-26H137.49
liver, neonate N30.CNhs11106.1382-42D117.37
lung, adult.CNhs10474.28-22B148.04
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F85.05
lung, embryo E15.CNhs11020.432-17C57.13
lung, embryo E16.CNhs10998.458-17B610.09
lung, embryo E17.CNhs10605.480-44A616.58
lung, embryo E18.CNhs10583.1287-20I626.66
lung, neonate N00.CNhs11224.640-42C626.54
lung, neonate N06.CNhs11212.683-20E528.06
lung, neonate N07.CNhs11111.715-19A327.90
lung, neonate N10.CNhs11219.750-23E629.18
lung, neonate N20.CNhs11109.822-18A442.93
lung, neonate N25.CNhs11119.1359-25C739.72
lung, neonate N30.CNhs11133.1394-42H243.68
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A160.32
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A197.36
mammary gland, adult lactating day02.CNhs10480.595-22B616.72
mammary gland, adult pregnant day19.CNhs10476.588-5H221.80
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.34
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I718.74
ovary, embryo E18.CNhs11040.505-44H711.22
ovary, neonate N00.CNhs11217.1299-22I411.56
oviduct, adult pregnant day01.CNhs10500.988-6G632.50
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E56.60
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I713.83
pancreas, neonate N00.CNhs11105.645-26G925.58
pancreas, neonate N01.CNhs11138.1531-43D710.91
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B611.69
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G812.94
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C76.08
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B97.45
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F57.73
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I725.58
placenta, adult pregnant day17.CNhs10464.577-18G330.50
prostate, adult.CNhs10470.859-1F89.70
skin, adult.CNhs10492.30-1C313.36
skin, neonate N00.CNhs11124.650-25G413.24
skin, neonate N03.CNhs11215.662-22H310.07
skin, neonate N06.CNhs11097.693-20I58.83
skin, neonate N10.CNhs11108.762-6C47.06
small intestine, neonate N16.CNhs11114.790-21I144.31
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G220.68
spleen, embryo E16.CNhs11035.461-43C19.70
spleen, embryo E18.CNhs11011.1271-21F237.78
spleen, neonate N10.CNhs11116.752-24D112.06
spleen, neonate N20.CNhs11112.824-19H125.29
spleen, neonate N25.CNhs11099.1354-25G328.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C625.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C923.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.77
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G89.96
stomach, embryo E16.CNhs11022.459-17D411.02
stomach, embryo E17.CNhs11006.1035-18D511.71
stomach, embryo E18.CNhs10999.1286-20C612.88
stomach, neonate N03.CNhs11193.1340-24B810.92
stomach, neonate N07.CNhs11210.718-18A915.79
stomach, neonate N25.CNhs11104.1355-25E49.42
stomach, neonate N30.CNhs11134.1386-42I114.65
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F56.88
testis, embryo E15.CNhs11034.443-27C59.93
testis, embryo E16.CNhs11033.470-26G55.64
testis, embryo E17.CNhs11029.486-18I510.07
testis, embryo E18.CNhs11027.503-18G514.87
testis, neonate N00.CNhs11189.1300-22B711.27
testis, neonate N07.CNhs11222.726-26I45.34
testis, neonate N10.CNhs11204.763-44D95.45
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B522.44
thymus, embryo E14.CNhs11041.402-44I410.54
thymus, embryo E15.CNhs11005.430-45I212.02
thymus, embryo E16.CNhs11002.456-26C515.98
thymus, embryo E17.CNhs10581.478-18C113.61
thymus, embryo E18.CNhs10595.1273-19G414.90
thymus, neonate N02.CNhs11181.1541-43F818.27
thymus, neonate N03.CNhs11137.2104-43C715.66
thymus, neonate N06.CNhs11197.681-26C418.27
thymus, neonate N07.CNhs11211.713-19D319.28
thymus, neonate N10.CNhs11194.748-24E419.86
thymus, neonate N20.CNhs11186.820-7A226.90
thymus, neonate N25.CNhs11125.1362-25G724.34
thymus, neonate N30.CNhs11132.1393-42G228.99
tongue, adult.CNhs10499.32-1B48.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.50
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.69
urinary bladder, adult.CNhs10481.879-12E425.11
uterus, adult pregnant day19.CNhs10497.590-15F533.41
uterus, adult.CNhs10509.92-27E542.67
vagina, adult.CNhs10502.89-27D514.36
vesicular gland, adult.CNhs10491.51-27F817.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.16
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.69
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B315.67
whole body, neonate N00.CNhs10525.657-19C214.83
whole body, neonate N01.CNhs10576.659-23C68.03
whole body, neonate N06.CNhs10515.692-21D19.49
whole body, neonate N10.CNhs10518.761-6B411.13





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:40186812..40186864,-&oldid=956696"