Personal tools

FFCP PHASE1:Mm9::chr5:31797109..31797151,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Gpn1_5end
|description=CAGE_peak_1_at_Gpn1_5end
|id=chr5:31797109..31797151,+
|id=chr5:31797109..31797151,+
|ontology_enrichment_celltype=CL:0000117!6.04e-15!23;CL:0000337!6.04e-15!23;CL:0000540!4.61e-14!33;CL:0000047!4.61e-14!33;CL:0000031!4.61e-14!33;CL:0000404!4.61e-14!33;CL:0000393!4.47e-13!39;CL:0000211!4.47e-13!39;CL:0000034!1.10e-10!97;CL:0000723!2.48e-09!91;CL:0000048!2.48e-09!91;CL:0000221!4.47e-09!44;CL:0000133!4.47e-09!44;CL:0002319!7.03e-09!43;CL:0000055!3.47e-08!50
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=8.96833543786846,2.79180326111489,2.27499619694768,0.60492842261366,1.00179145989269,7.55456723603504,3.97141489012394,9.8133725815598,16.3314917695933,16.3845168425395,21.2310280599626,23.5327869036242,8.38883576662908,10.1407666806037,6.32908547449759,6.68168382386426,4.89693314689703,10.2525203741427,10.2835825204304,9.33657233955666,9.18467533631554,10.8227136808965,9.92559198727954,5.11975752938901,5.73523202667925,2.29692785646008,6.03066794622705,4.95583835177545,5.32065574477847,4.28451220591882,5.54326276638262,11.4305521222734,5.53558308826113,15.8481681015439,14.1537293678125,13.4650062740379,11.637653306955,1.25559489221072,3.1253413780952,3.66466620781659,1.17646297606203,2.04913645487534,3.88408282424923,11.2048167998264,11.8611009526832,11.9305388905093,3.12956537739216,5.88667922227206,10.9843091367236,7.58276606389705,5.03951117851305,5.75010257459886,7.88578248471361,5.80289713609076,13.1076581665561,6.43148590089868,6.5902691185914,8.25075347643908,22.8617600771345,16.9277113367051,17.1134478946668,8.4711133017283,8.00365316500025,8.09909745553259,10.8775299882367,4.9733608046227,4.19440154725767,5.37905627450176,20.1157847878447,21.6009501330705,18.2982716375702,18.852964970651,20.5407743085001,17.8836566853833,18.2106394934649,17.4651569455904,16.5173821499083,13.1517958227743,12.595735727012,22.1568963386726,19.9443063053253,28.129322010065,13.959149950069,19.6966913511088,14.9742282821274,17.0884579574727,16.9422300150933,21.8087351615602,12.4948218999754,7.70829913089212,6.95674772884027,6.0229671388697,8.15965600449301,11.873470216032,9.09686984426737,8.96053774194671,7.02222100658759,5.62420064507591,6.75443611967459,5.3000936176551,11.2674735821344,7.69958864485907,2.54805239706646,0,11.6905162146056,9.37431502257865,9.60496445528088,6.8510327831436,6.47344709117929,10.5393918736026,10.0621489524359,7.91610243611567,11.992005857315,7.53613202763113,9.05433044944927,7.91699525376955,3.46072954828123,5.49477556295664,3.5384422077995,8.08834249737046,5.30019644304944,5.33362778448744,5.59175283654366,9.07620470735796,9.63454851341893,5.10914110417183,12.4607729486157,10.1983464268879,14.2318654321832,8.83764772488454,9.15001205637253,18.3455354084782,9.90798625095976,13.0414883238469,8.93488591606108,10.707923362472,10.0820970211813,3.98102305952298,3.79084137650512,7.78634866779954,14.053007839972,16.0931473103431,13.1445354757905,11.6042709733501,11.7022778540284,13.7081680704789,11.9938207436453,7.24369438069244,18.1077114063587,15.695804653929,11.2608719464927,8.54863356467542,10.0097009721215,6.96504333044333,8.43706759272568,13.1362616100206,9.12877143507205,6.43369767786788,12.7873574728017,11.8061690345236,9.14651633926275,11.884096056427,8.99629995223799,11.0187969778546,9.10175966035532,9.30135779001631,8.58474884478781,7.82327793860036,7.40519324610662,9.85004784474571,7.29619285912702,8.62579925809461,10.0993053033883,6.44190810049784,8.20130799400096,13.4805042216863,1.98251269790279,5.55346189993443,11.9441420299731,12.5407802804637,12.2424088255989,6.25218926332362,4.44756087689741,5.51654315726422,3.79623249235609,4.28217282282428,5.7807098024062,5.57078121715222,6.62877896205008,8.98819408654222,4.53889904736858,3.58454291857861,15.7424357791058,12.5673363870702,14.6520056375005,12.0154283428735,7.5641469995374,8.55657002661886,9.23253442014156,6.6424566590821,9.73392112616524,6.54004968785543,5.03969466048153,7.34118465150814,8.64859578498093,5.39669069723649,5.68008339887808,6.27060615356284,5.60176873919124,4.31544206176216,4.37765112292595,8.51140380883053,7.18841032636773,7.44281895337007,6.86482880852033,7.32478746046624,8.61107584905178,4.82443521363367,7.39012760666419,17.0542270593436,11.5705133273838,14.0888421193406,13.1426539041561,6.53274404023081,7.85544014923845,3.90267295715598,7.88175720530955,5.09368786192182,7.49437412690189,6.06294264448231,7.42545422023351,8.38964539772767,1.50791283939272,14.1415477792864,7.86822836830458,3.58717770196152,9.79358598925531,10.6662634798905,10.9836413402373,7.32165688892682,10.4117712407365,9.76096860741596,10.5557464889071,13.3822526853429,11.1399337041197,8.77537245445381,12.1443210502468,10.2289550268959,5.92931666919785,10.6036034419196,7.80670468645477,13.5329858787114,11.5649741141039,7.75359577970917,2.65490276679926,13.352934988524,11.4882951646605,4.90373207365335,7.38254732201932,5.53383266299069,6.20227903603731,10.9060118843252,9.62542921638748,7.9009189483954,4.21674434299995,3.09406629744561,8.85142974959849,13.8647042404109,15.3936833701478,11.574199891706,9.3990323830405,9.98865378571595,8.39200005070817,9.43841342255258,4.22409074514679,4.87213762986786,6.3953235435939,4.122156323537,5.00539722757307,7.2375509913787,5.96861720015682,5.9090723908222,3.49777003955821,8.34413859047294,6.83483523191411,7.01715351074956,7.40778109478847,3.57900068308913,3.69074414846768,5.94823250336959,9.68877050964975,11.8958734475109,8.153798454461,2.86401185404534,15.9749676758473,8.53941761932765,9.50446999231851,8.57262013659322,7.20596460362386,6.87808166562586,4.46328660916814,5.23511883968059,5.18459893167171,9.32008969630389,10.1464728963154,13.4564891439581,13.4021377270249,11.4726201122988,15.2408591703723,13.8544022902438,11.0315804327009,11.7183946359555,13.8414334641938,12.5623742829523,12.0972602628303,5.05617793005085,12.5689633479902,12.9415806027682,9.87398254631242,7.87717460936918,7.54989148168807,6.73094517311826,5.90758108698309,6.76475214652589,5.86792411243499,5.44461399738939,5.55509920216589,7.11967628138438,4.32444538071805,4.30787728868902,14.4290869693142,16.9559188991909,11.9198077618496,6.56844619709447,6.56888664079137,7.3260649706906,5.78794623513478,6.52043735245972,9.03602948187307,9.66682996665071,9.73922372846974,10.6548973053086,10.2762377965596,15.107877947794,12.1504050041725,9.90706647093285,10.8754178156209,5.69536342927002,16.8135503086366,11.9707462020309,9.90254913373978,6.80698807791223,12.157563432423,8.82448840560068,6.44515510624684,5.97501665992793,6.09746498224449,7.07552192938633,6.84394109703647,6.60192194851267,7.39767909012071,7.42691767896484,8.78762675020883,6.66811167796303,6.95305955669133,8.29509647993932,11.5384052224926,6.03515572551029,10.6289468239479,6.21165321557681,9.0605752179982,7.84870649814574,6.86998477031913,8.03838774970927,6.21955107767427,4.73525480588117,7.06181391998481,5.61142271657738,5.45721083371201,7.09232273104057,6.13846564754534,6.8172210121825,9.25951732709479,8.49355964989016,8.18760629558929,5.58664740525576,5.92993829413414,7.0589254118245,7.41977073985349
|phase1_expression=8.96833543786846,2.79180326111489,2.27499619694768,0.60492842261366,1.00179145989269,7.55456723603504,3.97141489012394,9.8133725815598,16.3314917695933,16.3845168425395,21.2310280599626,23.5327869036242,8.38883576662908,10.1407666806037,6.32908547449759,6.68168382386426,4.89693314689703,10.2525203741427,10.2835825204304,9.33657233955666,9.18467533631554,10.8227136808965,9.92559198727954,5.11975752938901,5.73523202667925,2.29692785646008,6.03066794622705,4.95583835177545,5.32065574477847,4.28451220591882,5.54326276638262,11.4305521222734,5.53558308826113,15.8481681015439,14.1537293678125,13.4650062740379,11.637653306955,1.25559489221072,3.1253413780952,3.66466620781659,1.17646297606203,2.04913645487534,3.88408282424923,11.2048167998264,11.8611009526832,11.9305388905093,3.12956537739216,5.88667922227206,10.9843091367236,7.58276606389705,5.03951117851305,5.75010257459886,7.88578248471361,5.80289713609076,13.1076581665561,6.43148590089868,6.5902691185914,8.25075347643908,22.8617600771345,16.9277113367051,17.1134478946668,8.4711133017283,8.00365316500025,8.09909745553259,10.8775299882367,4.9733608046227,4.19440154725767,5.37905627450176,20.1157847878447,21.6009501330705,18.2982716375702,18.852964970651,20.5407743085001,17.8836566853833,18.2106394934649,17.4651569455904,16.5173821499083,13.1517958227743,12.595735727012,22.1568963386726,19.9443063053253,28.129322010065,13.959149950069,19.6966913511088,14.9742282821274,17.0884579574727,16.9422300150933,21.8087351615602,12.4948218999754,7.70829913089212,6.95674772884027,6.0229671388697,8.15965600449301,11.873470216032,9.09686984426737,8.96053774194671,7.02222100658759,5.62420064507591,6.75443611967459,5.3000936176551,11.2674735821344,7.69958864485907,2.54805239706646,0,11.6905162146056,9.37431502257865,9.60496445528088,6.8510327831436,6.47344709117929,10.5393918736026,10.0621489524359,7.91610243611567,11.992005857315,7.53613202763113,9.05433044944927,7.91699525376955,3.46072954828123,5.49477556295664,3.5384422077995,8.08834249737046,5.30019644304944,5.33362778448744,5.59175283654366,9.07620470735796,9.63454851341893,5.10914110417183,12.4607729486157,10.1983464268879,14.2318654321832,8.83764772488454,9.15001205637253,18.3455354084782,9.90798625095976,13.0414883238469,8.93488591606108,10.707923362472,10.0820970211813,3.98102305952298,3.79084137650512,7.78634866779954,14.053007839972,16.0931473103431,13.1445354757905,11.6042709733501,11.7022778540284,13.7081680704789,11.9938207436453,7.24369438069244,18.1077114063587,15.695804653929,11.2608719464927,8.54863356467542,10.0097009721215,6.96504333044333,8.43706759272568,13.1362616100206,9.12877143507205,6.43369767786788,12.7873574728017,11.8061690345236,9.14651633926275,11.884096056427,8.99629995223799,11.0187969778546,9.10175966035532,9.30135779001631,8.58474884478781,7.82327793860036,7.40519324610662,9.85004784474571,7.29619285912702,8.62579925809461,10.0993053033883,6.44190810049784,8.20130799400096,13.4805042216863,1.98251269790279,5.55346189993443,11.9441420299731,12.5407802804637,12.2424088255989,6.25218926332362,4.44756087689741,5.51654315726422,3.79623249235609,4.28217282282428,5.7807098024062,5.57078121715222,6.62877896205008,8.98819408654222,4.53889904736858,3.58454291857861,15.7424357791058,12.5673363870702,14.6520056375005,12.0154283428735,7.5641469995374,8.55657002661886,9.23253442014156,6.6424566590821,9.73392112616524,6.54004968785543,5.03969466048153,7.34118465150814,8.64859578498093,5.39669069723649,5.68008339887808,6.27060615356284,5.60176873919124,4.31544206176216,4.37765112292595,8.51140380883053,7.18841032636773,7.44281895337007,6.86482880852033,7.32478746046624,8.61107584905178,4.82443521363367,7.39012760666419,17.0542270593436,11.5705133273838,14.0888421193406,13.1426539041561,6.53274404023081,7.85544014923845,3.90267295715598,7.88175720530955,5.09368786192182,7.49437412690189,6.06294264448231,7.42545422023351,8.38964539772767,1.50791283939272,14.1415477792864,7.86822836830458,3.58717770196152,9.79358598925531,10.6662634798905,10.9836413402373,7.32165688892682,10.4117712407365,9.76096860741596,10.5557464889071,13.3822526853429,11.1399337041197,8.77537245445381,12.1443210502468,10.2289550268959,5.92931666919785,10.6036034419196,7.80670468645477,13.5329858787114,11.5649741141039,7.75359577970917,2.65490276679926,13.352934988524,11.4882951646605,4.90373207365335,7.38254732201932,5.53383266299069,6.20227903603731,10.9060118843252,9.62542921638748,7.9009189483954,4.21674434299995,3.09406629744561,8.85142974959849,13.8647042404109,15.3936833701478,11.574199891706,9.3990323830405,9.98865378571595,8.39200005070817,9.43841342255258,4.22409074514679,4.87213762986786,6.3953235435939,4.122156323537,5.00539722757307,7.2375509913787,5.96861720015682,5.9090723908222,3.49777003955821,8.34413859047294,6.83483523191411,7.01715351074956,7.40778109478847,3.57900068308913,3.69074414846768,5.94823250336959,9.68877050964975,11.8958734475109,8.153798454461,2.86401185404534,15.9749676758473,8.53941761932765,9.50446999231851,8.57262013659322,7.20596460362386,6.87808166562586,4.46328660916814,5.23511883968059,5.18459893167171,9.32008969630389,10.1464728963154,13.4564891439581,13.4021377270249,11.4726201122988,15.2408591703723,13.8544022902438,11.0315804327009,11.7183946359555,13.8414334641938,12.5623742829523,12.0972602628303,5.05617793005085,12.5689633479902,12.9415806027682,9.87398254631242,7.87717460936918,7.54989148168807,6.73094517311826,5.90758108698309,6.76475214652589,5.86792411243499,5.44461399738939,5.55509920216589,7.11967628138438,4.32444538071805,4.30787728868902,14.4290869693142,16.9559188991909,11.9198077618496,6.56844619709447,6.56888664079137,7.3260649706906,5.78794623513478,6.52043735245972,9.03602948187307,9.66682996665071,9.73922372846974,10.6548973053086,10.2762377965596,15.107877947794,12.1504050041725,9.90706647093285,10.8754178156209,5.69536342927002,16.8135503086366,11.9707462020309,9.90254913373978,6.80698807791223,12.157563432423,8.82448840560068,6.44515510624684,5.97501665992793,6.09746498224449,7.07552192938633,6.84394109703647,6.60192194851267,7.39767909012071,7.42691767896484,8.78762675020883,6.66811167796303,6.95305955669133,8.29509647993932,11.5384052224926,6.03515572551029,10.6289468239479,6.21165321557681,9.0605752179982,7.84870649814574,6.86998477031913,8.03838774970927,6.21955107767427,4.73525480588117,7.06181391998481,5.61142271657738,5.45721083371201,7.09232273104057,6.13846564754534,6.8172210121825,9.25951732709479,8.49355964989016,8.18760629558929,5.58664740525576,5.92993829413414,7.0589254118245,7.41977073985349
|short_description=p1@Gpn1
|short_description=p1@Gpn1
}}
}}

Revision as of 23:18, 18 April 2012

Short description:p1@Gpn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gpn1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000076949, ENSMUST00000117700, ENSMUST00000131628, ENSMUST00000146880, NM_133756, uc008wyi.1_5end
EntrezGene:Gpn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gpn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E621.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F123.53
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.39
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.68
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.25
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.28
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.34
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.93
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.74
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B95.32
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.15
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.47
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.64
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.86
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.93
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.89
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.43
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C322.86
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.47
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.60
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.54
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.21
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.94
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.94
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.81
Mouse Schwann, donor1.CNhs12507.11728-123D912.49
Mouse Schwann, donor2.CNhs12573.11746-123F97.71
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.87
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.96
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.69
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.85
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D710.54
adrenal gland, embryo E14.CNhs11038.406-44C510.06
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I111.99
adrenal gland, embryo E18.CNhs11026.1262-18F57.54
adrenal gland, neonate N00.CNhs11191.1311-23C19.05
adrenal gland, neonate N25.CNhs11223.1377-27I37.92
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H15.49
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F58.09
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B29.08
cerebellum, neonate N30.CNhs11135.1395-42I29.63
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.46
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.23
corpora quadrigemina, adult.CNhs10501.16-22A48.84
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F118.35
cortex, adult.CNhs10473.12-14D59.91
cortex, neonate N30.CNhs11107.1392-42F213.04
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B210.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.08
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G47.79
eyeball, embryo E12.CNhs11016.345-16C614.05
eyeball, embryo E14.CNhs10521.399-16E216.09
eyeball, embryo E15.CNhs10593.426-16C913.14
eyeball, embryo E17.CNhs11023.1261-18D411.60
eyeball, neonate N00.CNhs11207.633-15C611.70
eyeball, neonate N01.CNhs11140.1532-43E713.71
eyeball, neonate N02.CNhs11205.1551-44G811.99
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E218.11
forelimb, embryo E12.CNhs10600.359-14H215.70
forelimb, embryo E13.CNhs10589.384-1E211.26
forelimb, embryo E14.CNhs10577.413-26A88.55
forelimb, embryo E15.CNhs11007.437-20E710.01
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B58.44
gonad, embryo E13.CNhs11044.1564-45I613.14
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.43
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.79
heart, embryo E11.CNhs10586.331-24E911.81
heart, embryo E12.CNhs11015.353-12F59.15
heart, embryo E13.CNhs11013.376-3I911.88
heart, embryo E14.CNhs10597.403-26D49.00
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C69.10
heart, embryo E17.CNhs11025.479-18E59.30
heart, embryo E18.CNhs11030.1283-20G38.58
heart, neonate N00.CNhs11213.639-21E37.82
heart, neonate N03.CNhs11221.1349-25I27.41
heart, neonate N10.CNhs11118.749-24G19.85
heart, neonate N16.CNhs11209.782-15G17.30
heart, neonate N20.CNhs11127.821-26I68.63
heart, neonate N25.CNhs11196.1351-25D310.10
heart, neonate N30.CNhs11202.1390-42D26.44
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G113.48
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I511.94
intestine, embryo E13.CNhs11010.381-16D512.54
intestine, embryo E15.CNhs10602.976-16D812.24
intestine, embryo E16.CNhs10585.463-22H46.25
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F75.52
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A56.63
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I915.74
kidney, embryo E15.CNhs10997.434-16F812.57
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I212.02
kidney, embryo E18.CNhs11001.1288-20C77.56
kidney, neonate N00.CNhs11214.646-21G78.56
kidney, neonate N10.CNhs11206.758-6D59.23
kidney, neonate N20.CNhs11113.832-19I16.64
kidney, neonate N25.CNhs11122.1353-25F39.73
kidney, neonate N30.CNhs11203.1385-42H16.54
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F87.34
liver, embryo E13.CNhs10524.378-3H68.65
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F56.27
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F44.38
liver, neonate N03.CNhs11123.1345-25G28.51
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H27.44
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A37.32
liver, neonate N25.CNhs11198.1368-26H18.61
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B17.39
lung, embryo E12.CNhs10522.354-16G217.05
lung, embryo E14.CNhs10604.404-26F811.57
lung, embryo E15.CNhs11020.432-17C514.09
lung, embryo E16.CNhs10998.458-17B613.14
lung, embryo E17.CNhs10605.480-44A66.53
lung, embryo E18.CNhs10583.1287-20I67.86
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E57.88
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E67.49
lung, neonate N20.CNhs11109.822-18A46.06
lung, neonate N25.CNhs11119.1359-25C77.43
lung, neonate N30.CNhs11133.1394-42H28.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C29.79
medulla oblongata, neonate N30.CNhs11200.1396-42A310.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.76
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.56
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.38
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.14
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.78
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.14
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I910.60
ovary, adult.CNhs10507.91-2I77.81
ovary, embryo E18.CNhs11040.505-44H713.53
ovary, neonate N00.CNhs11217.1299-22I411.56
oviduct, adult pregnant day01.CNhs10500.988-6G67.75
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F413.35
pancreas, embryo E15.CNhs11042.1556-45F211.49
pancreas, embryo E16.CNhs11003.460-26E54.90
pancreas, embryo E17.CNhs10599.1558-45G37.38
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D710.91
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E613.86
pituitary gland, embryo E13.CNhs11009.370-44C715.39
pituitary gland, embryo E14.CNhs11037.398-44A511.57
pituitary gland, embryo E15.CNhs10592.427-16B99.40
pituitary gland, embryo E16.CNhs11036.449-43F69.99
pituitary gland, embryo E17.CNhs11039.1265-44F58.39
pituitary gland, neonate N00.CNhs11190.1308-22E99.44
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F86.40
skin, adult.CNhs10492.30-1C34.12
skin, neonate N00.CNhs11124.650-25G45.01
skin, neonate N03.CNhs11215.662-22H37.24
skin, neonate N06.CNhs11097.693-20I55.97
skin, neonate N10.CNhs11108.762-6C45.91
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C98.34
spleen, adult.CNhs10465.25-2G26.83
spleen, embryo E16.CNhs11035.461-43C17.02
spleen, embryo E18.CNhs11011.1271-21F27.41
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H13.69
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.15
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E315.97
stomach, embryo E15.CNhs10603.1252-16G88.54
stomach, embryo E16.CNhs11022.459-17D49.50
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C67.21
stomach, neonate N03.CNhs11193.1340-24B86.88
stomach, neonate N07.CNhs11210.718-18A94.46
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I15.18
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F513.46
testis, embryo E15.CNhs11034.443-27C513.40
testis, embryo E16.CNhs11033.470-26G511.47
testis, embryo E17.CNhs11029.486-18I515.24
testis, embryo E18.CNhs11027.503-18G513.85
testis, neonate N00.CNhs11189.1300-22B711.03
testis, neonate N07.CNhs11222.726-26I411.72
testis, neonate N10.CNhs11204.763-44D913.84
testis, neonate N20.CNhs11110.839-18H312.56
testis, neonate N30.CNhs11130.1391-42E212.10
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I412.57
thymus, embryo E15.CNhs11005.430-45I212.94
thymus, embryo E16.CNhs11002.456-26C59.87
thymus, embryo E17.CNhs10581.478-18C17.88
thymus, embryo E18.CNhs10595.1273-19G47.55
thymus, neonate N02.CNhs11181.1541-43F86.73
thymus, neonate N03.CNhs11137.2104-43C75.91
thymus, neonate N06.CNhs11197.681-26C46.76
thymus, neonate N07.CNhs11211.713-19D35.87
thymus, neonate N10.CNhs11194.748-24E45.44
thymus, neonate N20.CNhs11186.820-7A25.56
thymus, neonate N25.CNhs11125.1362-25G77.12
thymus, neonate N30.CNhs11132.1393-42G24.32
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H314.43
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F716.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.92
urinary bladder, adult.CNhs10481.879-12E46.57
uterus, adult pregnant day19.CNhs10497.590-15F56.57
uterus, adult.CNhs10509.92-27E57.33
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I816.81
whole body, embryo E12.CNhs10587.857-27C911.97
whole body, embryo E13.CNhs10512.372-23H29.90
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B112.16
whole body, embryo E16.CNhs10514.453-14F28.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.85
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.87
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.82
whole body, embryo E17.5.CNhs10513.490-9F99.26
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C65.93
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:31797109..31797151,%2B&oldid=974813"