Personal tools

FFCP PHASE1:Mm9::chr8:17535251..17535390,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr8:17535251..17535390,-
|short_description=p1@Csmd1
|description=CAGE_peak_1_at_Csmd1_5end
|association_with_transcript=0bp_to_ENSMUST00000082104,ENSMUST00000122983,ENSMUST00000131778,ENSMUST00000133933,ENSMUST00000138348,NM_053171,uc009kzp.1,uc009kzq.1,uc009kzr.1_5end
|EntrezGene=94109
|EntrezGene=94109
|HGNC=
|HGNC=
|UniProt=Q923L3,Q5DTU1
|UniProt=Q923L3,Q5DTU1
|association_with_transcript=0bp_to_ENSMUST00000082104,ENSMUST00000122983,ENSMUST00000131778,ENSMUST00000133933,ENSMUST00000138348,NM_053171,uc009kzp.1,uc009kzq.1,uc009kzr.1_5end
|description=CAGE_peak_1_at_Csmd1_5end
|id=chr8:17535251..17535390,-
|ontology_enrichment_disease=
|phase1_expression=4.16387002472464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,20.66551950671,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0.523523743973798,0,0,0,17.877348152532,19.1602400004883,42.2157529971868,2.34717403304412,6.5407546914134,5.27246838562732,9.13820525649132,2.79972843250725,1.43752564364972,0,0,0,0,1.43266719969378,0,31.1567349723781,32.797440714866,32.9592329823213,0,0,7.64914759689189,3.9554654502679,4.9733608046227,18.8748069626595,14.2160772968975,15.9682002955056,8.10035629990144,9.67494822216357,32.8498632064374,27.3876990780001,13.8414603112898,9.20116521775069,14.7075005857603,28.6301290598411,39.455387468323,36.4047483817297,33.1034582202787,25.0676143470602,25.0038417867245,15.9134309430787,42.207195752376,43.3947023686141,56.5686884109442,55.8096988732484,53.8694398435119,9.84440513331393,38.768210334781,0.869593466105033,0,0,0,0,0,2.66844398250329,0,0,0,8.59144860637751,0,0,0,0,0,0,2.05530983494308,35.4744900596625,10.6878340126674,1.56136794089522,4.26251669636998,2.7673859670727,3.76806601381556,7.76085467095652,0.879666139307728,0,4.04878199375753,4.42305275974937,0.970601099684455,2.20841518460394,3.87900202508178,0,16.6885054296582,19.8974371472782,1.27728527604296,0,0,0,57.0702336132374,88.2976163439949,28.9005009859588,144.621834399974,157.265006258153,37.8174241098399,78.2002887986592,2.64782346010822,6.46916247172484,3.79084137650512,4.62972082950243,0.520481771850815,1.60931473103431,2.88099407688559,3.0140963567143,3.94611695077702,3.58718416797579,3.37326208415024,7.50239775143145,0,0.378212160335639,0.175951124163949,0.657587197282725,1.39023624612799,1.0447564995665,1.02891068203972,0.398068533636986,0,0,0,0.207125772535502,0,0.900310307305074,0.473489471170421,0.196764231747404,0.308534225774757,0.930135779001631,0.268273401399619,0.467061369468678,0.329119699826961,0.820837320395476,0.972825714550269,1.60819986167866,1.75640092232841,1.34206418760372,105.565554179192,34.5759497594396,0.330418782983798,0.528901133327089,0.853153002140936,0.928946687441754,0.902072229254653,1.00841762311671,0.667134131534611,0.760902504450237,1.42358718463353,0.658795818896044,1.00534083520108,1.1937388322469,0.974820435595601,0.898819408654221,0.864552199498777,1.7922714592893,0,0.799739588268102,0,0,0.775809948670503,0.911765658574141,0.885311519739602,1.62371162777562,0.941992367048249,1.35736880313981,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,1.10851914099963,2.08440552947533,0.325929952884052,0.848725428875941,0.704070744865506,1.00503754465089,2.38043640886014,4.09780660501378,6.14777062014145,4.4292937929755,5.26200736569707,2.13022309130459,2.76295970985433,1.15719246865209,0,0,4.42587845717133,8.82997588175144,28.2569038378514,27.5447463491677,0,2.7771801992481,1.89304931649754,3.12350995437311,6.89354872744957,5.01834475700359,7.12955757063661,10.190755108398,2.02405350837447,9.64444331107329,7.90575555893047,60.0870861708779,40.7368044547731,1.95872164033981,8.1443479676788,11.71287873105,0,1.21390318077491,1.209294227859,0.754420319023592,0.885905678642318,2.15204603560749,1.80899805217755,1.45413491791002,0.356497378384721,2.21225730555071,1.05418608574999,1.03135543248187,0.340439605753788,3.96134406868882,1.94038025674132,3.42939256050548,5.14286677562593,5.88617098086833,8.22745103010605,5.17590413494819,0.469343416127421,0,2.64634077665954,8.40919890001548,1.29171541356724,1.14594557363496,2.14870219205646,2.46211349617592,0.874442509889552,28.9263471136395,5.46786818553129,0.206386867963223,0.185194527369712,3.20226376907975,3.14396723758358,3.88922894451088,0,0,0,0,0.474503990371703,1.42323626988794,1.08005340821801,1.46361807210128,1.31017538247707,1.61837215661785,2.14898984885873,2.09404753587224,1.16653475962614,4.97071450469541,0,0.149516546043979,0,0,0.129159823477731,0.337912250981556,0.352071715937262,1.17183946359555,0.419437377702843,0,0.576060012515731,3.79213344753814,0.608175645870493,0.513554785824136,1.16928740680016,1.25318686967237,0.39736270956253,1.32214994471966,1.9199638532695,1.21159739937777,0.762068066549998,1.31074040677893,2.24153125701431,1.15454209968395,1.5193997283604,4.30787728868902,0,0,0.167884616364078,6.76163579112667,14.451550609741,5.86085197655248,7.71726164684637,1.50471631210609,179.02633410961,152.367653283876,160.98363927647,139.716637245418,163.734722225184,145.791022196212,161.330377555402,140.500215405957,157.693558326503,157.916895084305,0.103787347584177,5.1873233542134,10.0732827394939,12.1553358534147,1.25767897576789,3.49302666055027,12.0013233012872,13.1862436632892,13.1576875932644,15.1618327058278,13.1809235942925,9.99719609346204,9.45779225445812,11.268426823257,11.3722228532114,15.2413981210584,12.3996228760995,12.3461901096771,10.714233420886,11.6287146906174,9.60033906679163,8.69631450180754,9.53744759789284,11.7730597472186,11.2931256498397,10.9152844180263,10.7927503994936,10.2597187460759,9.09887562767274,15.1508413347589,12.5753119211625,13.1010961559499,11.0492381655816,10.8455788830176,9.83823716003821,17.2369298777183,10.292990771598,8.16510005383534,4.01705497344571,2.42650561031467,4.17362104116759
|phase1_expression=4.16387002472464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,20.66551950671,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0.523523743973798,0,0,0,17.877348152532,19.1602400004883,42.2157529971868,2.34717403304412,6.5407546914134,5.27246838562732,9.13820525649132,2.79972843250725,1.43752564364972,0,0,0,0,1.43266719969378,0,31.1567349723781,32.797440714866,32.9592329823213,0,0,7.64914759689189,3.9554654502679,4.9733608046227,18.8748069626595,14.2160772968975,15.9682002955056,8.10035629990144,9.67494822216357,32.8498632064374,27.3876990780001,13.8414603112898,9.20116521775069,14.7075005857603,28.6301290598411,39.455387468323,36.4047483817297,33.1034582202787,25.0676143470602,25.0038417867245,15.9134309430787,42.207195752376,43.3947023686141,56.5686884109442,55.8096988732484,53.8694398435119,9.84440513331393,38.768210334781,0.869593466105033,0,0,0,0,0,2.66844398250329,0,0,0,8.59144860637751,0,0,0,0,0,0,2.05530983494308,35.4744900596625,10.6878340126674,1.56136794089522,4.26251669636998,2.7673859670727,3.76806601381556,7.76085467095652,0.879666139307728,0,4.04878199375753,4.42305275974937,0.970601099684455,2.20841518460394,3.87900202508178,0,16.6885054296582,19.8974371472782,1.27728527604296,0,0,0,57.0702336132374,88.2976163439949,28.9005009859588,144.621834399974,157.265006258153,37.8174241098399,78.2002887986592,2.64782346010822,6.46916247172484,3.79084137650512,4.62972082950243,0.520481771850815,1.60931473103431,2.88099407688559,3.0140963567143,3.94611695077702,3.58718416797579,3.37326208415024,7.50239775143145,0,0.378212160335639,0.175951124163949,0.657587197282725,1.39023624612799,1.0447564995665,1.02891068203972,0.398068533636986,0,0,0,0.207125772535502,0,0.900310307305074,0.473489471170421,0.196764231747404,0.308534225774757,0.930135779001631,0.268273401399619,0.467061369468678,0.329119699826961,0.820837320395476,0.972825714550269,1.60819986167866,1.75640092232841,1.34206418760372,105.565554179192,34.5759497594396,0.330418782983798,0.528901133327089,0.853153002140936,0.928946687441754,0.902072229254653,1.00841762311671,0.667134131534611,0.760902504450237,1.42358718463353,0.658795818896044,1.00534083520108,1.1937388322469,0.974820435595601,0.898819408654221,0.864552199498777,1.7922714592893,0,0.799739588268102,0,0,0.775809948670503,0.911765658574141,0.885311519739602,1.62371162777562,0.941992367048249,1.35736880313981,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,1.10851914099963,2.08440552947533,0.325929952884052,0.848725428875941,0.704070744865506,1.00503754465089,2.38043640886014,4.09780660501378,6.14777062014145,4.4292937929755,5.26200736569707,2.13022309130459,2.76295970985433,1.15719246865209,0,0,4.42587845717133,8.82997588175144,28.2569038378514,27.5447463491677,0,2.7771801992481,1.89304931649754,3.12350995437311,6.89354872744957,5.01834475700359,7.12955757063661,10.190755108398,2.02405350837447,9.64444331107329,7.90575555893047,60.0870861708779,40.7368044547731,1.95872164033981,8.1443479676788,11.71287873105,0,1.21390318077491,1.209294227859,0.754420319023592,0.885905678642318,2.15204603560749,1.80899805217755,1.45413491791002,0.356497378384721,2.21225730555071,1.05418608574999,1.03135543248187,0.340439605753788,3.96134406868882,1.94038025674132,3.42939256050548,5.14286677562593,5.88617098086833,8.22745103010605,5.17590413494819,0.469343416127421,0,2.64634077665954,8.40919890001548,1.29171541356724,1.14594557363496,2.14870219205646,2.46211349617592,0.874442509889552,28.9263471136395,5.46786818553129,0.206386867963223,0.185194527369712,3.20226376907975,3.14396723758358,3.88922894451088,0,0,0,0,0.474503990371703,1.42323626988794,1.08005340821801,1.46361807210128,1.31017538247707,1.61837215661785,2.14898984885873,2.09404753587224,1.16653475962614,4.97071450469541,0,0.149516546043979,0,0,0.129159823477731,0.337912250981556,0.352071715937262,1.17183946359555,0.419437377702843,0,0.576060012515731,3.79213344753814,0.608175645870493,0.513554785824136,1.16928740680016,1.25318686967237,0.39736270956253,1.32214994471966,1.9199638532695,1.21159739937777,0.762068066549998,1.31074040677893,2.24153125701431,1.15454209968395,1.5193997283604,4.30787728868902,0,0,0.167884616364078,6.76163579112667,14.451550609741,5.86085197655248,7.71726164684637,1.50471631210609,179.02633410961,152.367653283876,160.98363927647,139.716637245418,163.734722225184,145.791022196212,161.330377555402,140.500215405957,157.693558326503,157.916895084305,0.103787347584177,5.1873233542134,10.0732827394939,12.1553358534147,1.25767897576789,3.49302666055027,12.0013233012872,13.1862436632892,13.1576875932644,15.1618327058278,13.1809235942925,9.99719609346204,9.45779225445812,11.268426823257,11.3722228532114,15.2413981210584,12.3996228760995,12.3461901096771,10.714233420886,11.6287146906174,9.60033906679163,8.69631450180754,9.53744759789284,11.7730597472186,11.2931256498397,10.9152844180263,10.7927503994936,10.2597187460759,9.09887562767274,15.1508413347589,12.5753119211625,13.1010961559499,11.0492381655816,10.8455788830176,9.83823716003821,17.2369298777183,10.292990771598,8.16510005383534,4.01705497344571,2.42650561031467,4.17362104116759
|short_description=p1@Csmd1
}}
}}

Revision as of 00:49, 19 April 2012

Short description:p1@Csmd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Csmd1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000082104, ENSMUST00000122983, ENSMUST00000131778, ENSMUST00000133933, ENSMUST00000138348, NM_053171, uc009kzp.1, uc009kzq.1, uc009kzr.1_5end
EntrezGene:Csmd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Csmd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B342.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C331.16
Mouse Granule cells, donor2.CNhs12357.11731-123E332.80
Mouse Granule cells, donor3.CNhs12108.11636-122C732.96
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C818.87
Mouse Microglia, donor2.CNhs12634.11736-123E814.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F132.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D527.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F339.46
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D736.40
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D433.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.07
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E542.21
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I643.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D656.57
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F655.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E153.87
Mouse Schwann, donor1.CNhs12507.11728-123D99.84
Mouse Schwann, donor2.CNhs12573.11746-123F938.77
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.59
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H935.47
adrenal gland, adult.CNhs10508.49-24D710.69
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C17.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H14.05
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B216.69
cerebellum, neonate N30.CNhs11135.1395-42I219.90
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A457.07
corpus striatum, adult.CNhs10487.19-21D888.30
corpus striatum, neonate N00.CNhs11226.630-43F128.90
cortex, adult.CNhs10473.12-14D5144.62
cortex, neonate N30.CNhs11107.1392-42F2157.27
diencephalon, adult.CNhs10482.20-12F237.82
diencephalon, neonate N30.CNhs11201.1388-42B278.20
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.47
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C63.95
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A27.50
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E8105.57
hippocampus, neonate N00.CNhs11228.627-43G134.58
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E56.15
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H28.83
medulla oblongata, adult.CNhs10477.17-12C228.26
medulla oblongata, neonate N30.CNhs11200.1396-42A327.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.89
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I960.09
ovary, adult.CNhs10507.91-2I740.74
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G611.71
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B95.14
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F58.23
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C38.41
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C928.93
spleen, adult.CNhs10465.25-2G25.47
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A22.24
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E46.76
uterus, adult pregnant day19.CNhs10497.590-15F514.45
uterus, adult.CNhs10509.92-27E55.86
vagina, adult.CNhs10502.89-27D57.72
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1179.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2152.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3160.98
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7139.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4163.73
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5145.79
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6161.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7140.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8157.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9157.92
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H210.07
whole body, embryo E14.5.CNhs10578.420-27D212.16
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.27
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.63
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.77
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.85
whole body, embryo E17.5.CNhs10513.490-9F99.84
whole body, embryo E17.CNhs10517.475-3I517.24
whole body, embryo E18.CNhs10516.493-3B310.29
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:17535251..17535390,-&oldid=988268"