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Coexpression cluster:C82

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Full id: C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34



Phase1 CAGE Peaks

Hg19::chr10:104533977..104533990,+p@chr10:104533977..104533990
+
Hg19::chr10:104545681..104545697,-p@chr10:104545681..104545697
-
Hg19::chr10:104545870..104545915,+p@chr10:104545870..104545915
+
Hg19::chr10:126369470..126369475,+p@chr10:126369470..126369475
+
Hg19::chr10:129681159..129681175,-p@chr10:129681159..129681175
-
Hg19::chr10:17066097..17066134,+p@chr10:17066097..17066134
+
Hg19::chr10:17067634..17067645,-p@chr10:17067634..17067645
-
Hg19::chr10:17067824..17067836,+p@chr10:17067824..17067836
+
Hg19::chr10:17067890..17067913,+p@chr10:17067890..17067913
+
Hg19::chr10:17069000..17069014,+p@chr10:17069000..17069014
+
Hg19::chr10:17242471..17242477,-p@chr10:17242471..17242477
-
Hg19::chr10:17242512..17242523,-p9@TRDMT1
Hg19::chr10:17242530..17242542,-p4@TRDMT1
Hg19::chr10:17242613..17242631,+p@chr10:17242613..17242631
+
Hg19::chr10:17243340..17243355,-p3@TRDMT1
Hg19::chr10:17243357..17243399,-p2@TRDMT1
Hg19::chr10:17243514..17243535,+p@chr10:17243514..17243535
+
Hg19::chr10:20293370..20293386,+p@chr10:20293370..20293386
+
Hg19::chr10:3847396..3847414,-p@chr10:3847396..3847414
-
Hg19::chr10:3847416..3847430,-p@chr10:3847416..3847430
-
Hg19::chr10:3916000..3916035,-p@chr10:3916000..3916035
-
Hg19::chr10:48482237..48482242,-p@chr10:48482237..48482242
-
Hg19::chr10:48482432..48482435,+p@chr10:48482432..48482435
+
Hg19::chr10:60144114..60144139,+p@chr10:60144114..60144139
+
Hg19::chr10:64380497..64380512,-p@chr10:64380497..64380512
-
Hg19::chr10:64392525..64392540,+p@chr10:64392525..64392540
+
Hg19::chr10:65029140..65029162,+p@chr10:65029140..65029162
+
Hg19::chr11:129920426..129920430,+p@chr11:129920426..129920430
+
Hg19::chr11:35104964..35104990,-p@chr11:35104964..35104990
-
Hg19::chr11:35104993..35104996,-p@chr11:35104993..35104996
-
Hg19::chr11:35105636..35105686,+p@chr11:35105636..35105686
+
Hg19::chr11:60157278..60157288,+p@chr11:60157278..60157288
+
Hg19::chr11:60930092..60930106,-p@chr11:60930092..60930106
-
Hg19::chr11:61185177..61185189,-p@chr11:61185177..61185189
-
Hg19::chr11:62321001..62321030,-p@chr11:62321001..62321030
-
Hg19::chr11:63335017..63335035,+p@chr11:63335017..63335035
+
Hg19::chr11:63335039..63335063,+p@chr11:63335039..63335063
+
Hg19::chr12:109232410..109232427,+p@chr12:109232410..109232427
+
Hg19::chr12:116893709..116893733,+p@chr12:116893709..116893733
+
Hg19::chr12:121739938..121739950,+p@chr12:121739938..121739950
+
Hg19::chr12:13250508..13250515,+p@chr12:13250508..13250515
+
Hg19::chr12:29317815..29317846,-p@chr12:29317815..29317846
-
Hg19::chr12:29317948..29317994,+p@chr12:29317948..29317994
+
Hg19::chr12:53267915..53267928,-p@chr12:53267915..53267928
-
Hg19::chr12:53267946..53267974,-p@chr12:53267946..53267974
-
Hg19::chr12:53267977..53268036,-p@chr12:53267977..53268036
-
Hg19::chr12:54807344..54807366,+p@chr12:54807344..54807366
+
Hg19::chr12:68753216..68753232,+p@chr12:68753216..68753232
+
Hg19::chr12:68758900..68758911,+p@chr12:68758900..68758911
+
Hg19::chr12:68758939..68758961,-p@chr12:68758939..68758961
-
Hg19::chr12:68758975..68758989,-p@chr12:68758975..68758989
-
Hg19::chr12:68759286..68759299,+p@chr12:68759286..68759299
+
Hg19::chr12:68759388..68759416,+p@chr12:68759388..68759416
+
Hg19::chr12:68761672..68761683,-p@chr12:68761672..68761683
-
Hg19::chr12:68761695..68761731,-p@chr12:68761695..68761731
-
Hg19::chr12:76414859..76414885,+p@chr12:76414859..76414885
+
Hg19::chr12:89560326..89560337,-p@chr12:89560326..89560337
-
Hg19::chr12:89560342..89560372,-p@chr12:89560342..89560372
-
Hg19::chr12:89847483..89847491,-p@chr12:89847483..89847491
-
Hg19::chr13:42031316..42031325,-p@chr13:42031316..42031325
-
Hg19::chr13:42031350..42031392,-p@chr13:42031350..42031392
-
Hg19::chr13:49227910..49227937,+p2@CYSLTR2
Hg19::chr13:99973121..99973130,-p@chr13:99973121..99973130
-
Hg19::chr14:105948312..105948345,-p@chr14:105948312..105948345
-
Hg19::chr14:105948473..105948498,+p@chr14:105948473..105948498
+
Hg19::chr14:105954077..105954084,-p@chr14:105954077..105954084
-
Hg19::chr14:50468469..50468481,+p@chr14:50468469..50468481
+
Hg19::chr14:52794067..52794110,-p@chr14:52794067..52794110
-
Hg19::chr14:55592226..55592231,-p@chr14:55592226..55592231
-
Hg19::chr14:55770925..55770967,+p@chr14:55770925..55770967
+
Hg19::chr14:73603644..73603653,-p@chr14:73603644..73603653
-
Hg19::chr14:91830519..91830529,-p@chr14:91830519..91830529
-
Hg19::chr15:39719330..39719335,-p6@ENST00000558209
Hg19::chr15:39719343..39719357,-p1@ENST00000558209
Hg19::chr15:39719744..39719763,+p@chr15:39719744..39719763
+
Hg19::chr15:50358642..50358649,+p@chr15:50358642..50358649
+
Hg19::chr15:50358665..50358679,+p@chr15:50358665..50358679
+
Hg19::chr15:50358693..50358704,+p@chr15:50358693..50358704
+
Hg19::chr15:50358999..50359010,+p@chr15:50358999..50359010
+
Hg19::chr15:67383912..67383927,+p@chr15:67383912..67383927
+
Hg19::chr15:86127558..86127582,+p@chr15:86127558..86127582
+
Hg19::chr15:90944179..90944225,-p@chr15:90944179..90944225
-
Hg19::chr15:90944315..90944326,+p@chr15:90944315..90944326
+
Hg19::chr15:90944341..90944373,+p@chr15:90944341..90944373
+
Hg19::chr16:17474619..17474656,-p@chr16:17474619..17474656
-
Hg19::chr16:29129822..29129845,-p@chr16:29129822..29129845
-
Hg19::chr17:62097580..62097601,+p@chr17:62097580..62097601
+
Hg19::chr17:7036113..7036124,-p@chr17:7036113..7036124
-
Hg19::chr18:11850875..11850895,-p@chr18:11850875..11850895
-
Hg19::chr18:74820004..74820024,-p@chr18:74820004..74820024
-
Hg19::chr18:74820075..74820091,-p@chr18:74820075..74820091
-
Hg19::chr18:74820100..74820105,+p@chr18:74820100..74820105
+
Hg19::chr19:41834142..41834168,+p@chr19:41834142..41834168
+
Hg19::chr19:45240164..45240191,+p@chr19:45240164..45240191
+
Hg19::chr19:52320046..52320049,-p@chr19:52320046..52320049
-
Hg19::chr19:6057689..6057699,+p@chr19:6057689..6057699
+
Hg19::chr19:6062331..6062346,-p@chr19:6062331..6062346
-
Hg19::chr19:6062387..6062398,-p@chr19:6062387..6062398
-
Hg19::chr19:6062453..6062457,-p@chr19:6062453..6062457
-
Hg19::chr19:6066092..6066109,+p@chr19:6066092..6066109
+
Hg19::chr1:109133646..109133666,-p@chr1:109133646..109133666
-
Hg19::chr1:109133864..109133905,+p@chr1:109133864..109133905
+
Hg19::chr1:109134776..109134796,-p@chr1:109134776..109134796
-
Hg19::chr1:112050102..112050112,-p@chr1:112050102..112050112
-
Hg19::chr1:114473251..114473289,-p@chr1:114473251..114473289
-
Hg19::chr1:12239173..12239198,-p@chr1:12239173..12239198
-
Hg19::chr1:12662045..12662059,-p@chr1:12662045..12662059
-
Hg19::chr1:151913598..151913611,-p@chr1:151913598..151913611
-
Hg19::chr1:151913612..151913631,-p@chr1:151913612..151913631
-
Hg19::chr1:151913957..151913980,-p@chr1:151913957..151913980
-
Hg19::chr1:151914166..151914193,+p@chr1:151914166..151914193
+
Hg19::chr1:151917005..151917021,-p@chr1:151917005..151917021
-
Hg19::chr1:151917057..151917078,-p@chr1:151917057..151917078
-
Hg19::chr1:151917148..151917162,-p@chr1:151917148..151917162
-
Hg19::chr1:151917355..151917371,+p@chr1:151917355..151917371
+
Hg19::chr1:151918240..151918247,-p@chr1:151918240..151918247
-
Hg19::chr1:151918249..151918277,-p@chr1:151918249..151918277
-
Hg19::chr1:151918280..151918290,-p@chr1:151918280..151918290
-
Hg19::chr1:151918485..151918503,+p@chr1:151918485..151918503
+
Hg19::chr1:15545407..15545411,+p@chr1:15545407..15545411
+
Hg19::chr1:221862665..221862679,-p@chr1:221862665..221862679
-
Hg19::chr1:28189986..28189990,+p@chr1:28189986..28189990
+
Hg19::chr1:38465437..38465459,+p@chr1:38465437..38465459
+
Hg19::chr1:92179103..92179141,-p@chr1:92179103..92179141
-
Hg19::chr20:56008066..56008071,-p@chr20:56008066..56008071
-
Hg19::chr21:36238528..36238531,+p@chr21:36238528..36238531
+
Hg19::chr22:37281783..37281788,+p@chr22:37281783..37281788
+
Hg19::chr22:43326895..43326930,-p@chr22:43326895..43326930
-
Hg19::chr22:43329570..43329602,-p@chr22:43329570..43329602
-
Hg19::chr22:43329610..43329637,-p@chr22:43329610..43329637
-
Hg19::chr22:43330001..43330012,+p@chr22:43330001..43330012
+
Hg19::chr22:43330043..43330062,+p@chr22:43330043..43330062
+
Hg19::chr22:44464355..44464369,-p@chr22:44464355..44464369
-
Hg19::chr22:44999934..44999939,+p@chr22:44999934..44999939
+
Hg19::chr2:216614453..216614472,-p@chr2:216614453..216614472
-
Hg19::chr2:216614478..216614489,-p@chr2:216614478..216614489
-
Hg19::chr2:216614538..216614551,-p@chr2:216614538..216614551
-
Hg19::chr2:235217365..235217381,-p@chr2:235217365..235217381
-
Hg19::chr2:235217451..235217465,-p@chr2:235217451..235217465
-
Hg19::chr2:235334858..235334870,-p@chr2:235334858..235334870
-
Hg19::chr2:240387639..240387653,+p@chr2:240387639..240387653
+
Hg19::chr2:40709772..40709789,-p@chr2:40709772..40709789
-
Hg19::chr2:47212524..47212567,+p@chr2:47212524..47212567
+
Hg19::chr2:47284758..47284782,-p@chr2:47284758..47284782
-
Hg19::chr2:47300229..47300236,+p@chr2:47300229..47300236
+
Hg19::chr2:47300248..47300284,+p@chr2:47300248..47300284
+
Hg19::chr2:65090007..65090020,+p@chr2:65090007..65090020
+
Hg19::chr2:65090091..65090103,+p@chr2:65090091..65090103
+
Hg19::chr2:99122586..99122606,-p@chr2:99122586..99122606
-
Hg19::chr3:112298821..112298852,+p@chr3:112298821..112298852
+
Hg19::chr3:151976224..151976237,-p@chr3:151976224..151976237
-
Hg19::chr3:151976260..151976273,-p@chr3:151976260..151976273
-
Hg19::chr3:152939631..152939652,-p@chr3:152939631..152939652
-
Hg19::chr3:15835826..15835840,-p@chr3:15835826..15835840
-
Hg19::chr3:15836007..15836021,+p@chr3:15836007..15836021
+
Hg19::chr3:15836027..15836046,+p@chr3:15836027..15836046
+
Hg19::chr3:15837673..15837713,+p@chr3:15837673..15837713
+
Hg19::chr3:15847222..15847244,-p@chr3:15847222..15847244
-
Hg19::chr3:172468136..172468178,-p@chr3:172468136..172468178
-
Hg19::chr3:190335275..190335290,+p@chr3:190335275..190335290
+
Hg19::chr3:196370159..196370173,-p@chr3:196370159..196370173
-
Hg19::chr3:45208780..45208803,+p@chr3:45208780..45208803
+
Hg19::chr4:124538142..124538152,-p@chr4:124538142..124538152
-
Hg19::chr4:124538169..124538193,-p@chr4:124538169..124538193
-
Hg19::chr4:124538200..124538219,-p@chr4:124538200..124538219
-
Hg19::chr4:2414806..2414827,-p@chr4:2414806..2414827
-
Hg19::chr4:26076498..26076513,+p@chr4:26076498..26076513
+
Hg19::chr4:26219782..26219791,-p@chr4:26219782..26219791
-
Hg19::chr4:3374759..3374771,-p@chr4:3374759..3374771
-
Hg19::chr4:40056412..40056426,+p@chr4:40056412..40056426
+
Hg19::chr4:40057419..40057431,+p@chr4:40057419..40057431
+
Hg19::chr5:106725704..106725717,+p@chr5:106725704..106725717
+
Hg19::chr5:106725733..106725744,+p@chr5:106725733..106725744
+
Hg19::chr5:106725747..106725757,+p@chr5:106725747..106725757
+
Hg19::chr5:140984131..140984145,+p@chr5:140984131..140984145
+
Hg19::chr5:140984152..140984163,+p@chr5:140984152..140984163
+
Hg19::chr5:140984173..140984197,+p@chr5:140984173..140984197
+
Hg19::chr5:146862466..146862485,-p@chr5:146862466..146862485
-
Hg19::chr5:40391958..40391988,+p@chr5:40391958..40391988
+
Hg19::chr5:59055872..59055891,-p@chr5:59055872..59055891
-
Hg19::chr6:11318639..11318673,-p@chr6:11318639..11318673
-
Hg19::chr6:121655787..121655813,+p@chr6:121655787..121655813
+
Hg19::chr6:13396406..13396432,+p@chr6:13396406..13396432
+
Hg19::chr6:136904512..136904532,+p@chr6:136904512..136904532
+
Hg19::chr6:138145416..138145431,-p@chr6:138145416..138145431
-
Hg19::chr6:14721357..14721365,-p@chr6:14721357..14721365
-
Hg19::chr6:158452675..158452686,+p@chr6:158452675..158452686
+
Hg19::chr6:159271714..159271721,+p@chr6:159271714..159271721
+
Hg19::chr6:160403136..160403162,+p@chr6:160403136..160403162
+
Hg19::chr6:160403199..160403212,+p@chr6:160403199..160403212
+
Hg19::chr6:161790443..161790451,-p@chr6:161790443..161790451
-
Hg19::chr6:167504549..167504554,-p@chr6:167504549..167504554
-
Hg19::chr6:167508510..167508523,-p@chr6:167508510..167508523
-
Hg19::chr6:20326681..20326699,+p@chr6:20326681..20326699
+
Hg19::chr6:25007534..25007546,-p@chr6:25007534..25007546
-
Hg19::chr6:25007568..25007579,-p@chr6:25007568..25007579
-
Hg19::chr6:33029858..33029902,-p@chr6:33029858..33029902
-
Hg19::chr6:37070154..37070164,-p@chr6:37070154..37070164
-
Hg19::chr7:100780601..100780612,+p@chr7:100780601..100780612
+
Hg19::chr7:1014746..1014766,-p3@COX19
Hg19::chr7:104597631..104597646,-p@chr7:104597631..104597646
-
Hg19::chr7:104597794..104597837,+p@chr7:104597794..104597837
+
Hg19::chr7:12726552..12726563,+p3@ARL4A
Hg19::chr7:158611014..158611026,-p@chr7:158611014..158611026
-
Hg19::chr7:158611500..158611530,+p@chr7:158611500..158611530
+
Hg19::chr7:17049278..17049326,+p@chr7:17049278..17049326
+
Hg19::chr7:45020110..45020119,-p@chr7:45020110..45020119
-
Hg19::chr7:73132509..73132513,+p@chr7:73132509..73132513
+
Hg19::chr7:968509..968538,+p@chr7:968509..968538
+
Hg19::chr8:102167846..102167856,+p@chr8:102167846..102167856
+
Hg19::chr8:116507627..116507631,+p@chr8:116507627..116507631
+
Hg19::chr8:145516231..145516253,-p@chr8:145516231..145516253
-
Hg19::chr8:48504387..48504397,-p@chr8:48504387..48504397
-
Hg19::chr9:110250603..110250614,-p24@KLF4
Hg19::chr9:110252580..110252611,+p@chr9:110252580..110252611
+
Hg19::chr9:128003959..128003980,+p2@ENST00000468244
Hg19::chr9:136154265..136154271,-p@chr9:136154265..136154271
-
Hg19::chr9:34986883..34986905,+p@chr9:34986883..34986905
+
Hg19::chr9:36151946..36151961,-p@chr9:36151946..36151961
-
Hg19::chr9:36152108..36152123,+p@chr9:36152108..36152123
+
Hg19::chr9:36152132..36152143,+p@chr9:36152132..36152143
+
Hg19::chr9:73178844..73178863,+p@chr9:73178844..73178863
+
Hg19::chr9:97418592..97418631,-p@chr9:97418592..97418631
-
Hg19::chrX:106918248..106918263,+p@chrX:106918248..106918263
+
Hg19::chrX:11359728..11359776,+p@chrX:11359728..11359776
+
Hg19::chrX:38728212..38728224,-p@chrX:38728212..38728224
-
Hg19::chrX:45626788..45626791,-p@chrX:45626788..45626791
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0001631cysteinyl leukotriene receptor activity0.0125586231956325
GO:0016428tRNA (cytosine-5-)-methyltransferase activity0.0125586231956325
GO:0016427tRNA (cytosine)-methyltransferase activity0.0125586231956325
GO:0007500mesodermal cell fate determination0.014647414559192
GO:0003886DNA (cytosine-5-)-methyltransferase activity0.014647414559192
GO:0004974leukotriene receptor activity0.014647414559192
GO:0009008DNA-methyltransferase activity0.014647414559192
GO:0001710mesodermal cell fate commitment0.014647414559192
GO:0048333mesodermal cell differentiation0.014647414559192
GO:0008175tRNA methyltransferase activity0.0246124767523266
GO:0001707mesoderm formation0.0246124767523266
GO:0048332mesoderm morphogenesis0.0246124767523266
GO:0001704formation of primary germ layer0.0246124767523266
GO:0006305DNA alkylation0.0287069673487321
GO:0006306DNA methylation0.0287069673487321
GO:0007369gastrulation0.0287069673487321
GO:0008173RNA methyltransferase activity0.0287069673487321
GO:0006304DNA modification0.0287069673487321
GO:0001709cell fate determination0.0287069673487321
GO:0007498mesoderm development0.0402649374668714
GO:0043414biopolymer methylation0.0402649374668714



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

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ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

"{{{coexpression_dpi_cluster_scores_median}}}" is not a number.

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