Personal tools

UBERON:0007497

From FANTOM5_SSTAR

Revision as of 11:43, 12 September 2014 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:developing epithelial placode
Definition:"A domain of columnar epithelium in an embryo that represents the early stage of the development of the epithelial component of a new anatomical structure." [JB:DEF]
Xrefs:
links:

AEO:0000112
AEO:0000218

EHDAA2:0003112
Synonyms: "epithelial placode" EXACT [AEO:0000112]
Alt_id: EHDAA2:0003112

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000485(simple columnar epithelium),UBERON:0001048(primordium)



Children

is a:UBERON:0001049 (neural tube),UBERON:0003050 (olfactory placode),UBERON:0003051 (ear vesicle),UBERON:0003071 (eye primordium),UBERON:0003075 (neural plate),UBERON:0003894 (liver primordium),UBERON:0004209 (renal vesicle),UBERON:0005081 (ureter ureteric bud),UBERON:0010532 (primitive nephron)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007497 (developing epithelial placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_bb89b382ec01bf7b8e5f3f2edd211187p@chr6:21648948..21648949, +
1.55e-98FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_bb89b382ec01bf7b8e5f3f2edd211187p@chr4:70707713..70707716, -
1.55e-98FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_bb89b382ec01bf7b8e5f3f2edd211187p@chr6:21648948..21648949, +
1.55e-98FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_bb89b382ec01bf7b8e5f3f2edd211187p@chr8:90366581..90366594, -
1.55e-98FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_bb89b382ec01bf7b8e5f3f2edd211187p@chr4:70707713..70707716, -
1.55e-98FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_bb89b382ec01bf7b8e5f3f2edd211187p@chr8:90366581..90366594, -
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_43170746cb22dd0005a9ffd1c223da97p7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_43170746cb22dd0005a9ffd1c223da97p6@Fam70b
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_43170746cb22dd0005a9ffd1c223da97p@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_43170746cb22dd0005a9ffd1c223da97p@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_43170746cb22dd0005a9ffd1c223da97p@chr17:13983160..13983167, +
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_43170746cb22dd0005a9ffd1c223da97p9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_43170746cb22dd0005a9ffd1c223da97p10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_43170746cb22dd0005a9ffd1c223da97p@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_43170746cb22dd0005a9ffd1c223da97p@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_43170746cb22dd0005a9ffd1c223da97p1@Otog
1.87e-86FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_43170746cb22dd0005a9ffd1c223da97p@chr5:3909310..3909321, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_43170746cb22dd0005a9ffd1c223da97p@chr14:31283072..31283081, -
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_43170746cb22dd0005a9ffd1c223da97p1@Otogl
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_43170746cb22dd0005a9ffd1c223da97p5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_43170746cb22dd0005a9ffd1c223da97p@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_43170746cb22dd0005a9ffd1c223da97p@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_43170746cb22dd0005a9ffd1c223da97p@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_43170746cb22dd0005a9ffd1c223da97p@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_43170746cb22dd0005a9ffd1c223da97p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_43170746cb22dd0005a9ffd1c223da97p13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_43170746cb22dd0005a9ffd1c223da97p5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_43170746cb22dd0005a9ffd1c223da97p2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_43170746cb22dd0005a9ffd1c223da97p5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_43170746cb22dd0005a9ffd1c223da97p@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_43170746cb22dd0005a9ffd1c223da97p41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_43170746cb22dd0005a9ffd1c223da97p@chr15:89215319..89215330, +
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_43170746cb22dd0005a9ffd1c223da97p2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_43170746cb22dd0005a9ffd1c223da97p@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_43170746cb22dd0005a9ffd1c223da97p21@Espn
1.87e-86FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_43170746cb22dd0005a9ffd1c223da97p2@Gpr152
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_43170746cb22dd0005a9ffd1c223da97p@chr12:13508046..13508055, +
1.87e-86FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_43170746cb22dd0005a9ffd1c223da97p@chr9:42206784..42206793, -
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_43170746cb22dd0005a9ffd1c223da97p1@Tmc1
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_43170746cb22dd0005a9ffd1c223da97p@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_43170746cb22dd0005a9ffd1c223da97p2@Tectb
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_43170746cb22dd0005a9ffd1c223da97p2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_43170746cb22dd0005a9ffd1c223da97p@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_43170746cb22dd0005a9ffd1c223da97p2@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_43170746cb22dd0005a9ffd1c223da97p@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_43170746cb22dd0005a9ffd1c223da97p2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_43170746cb22dd0005a9ffd1c223da97p@chr3:154459184..154459195, +
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_43170746cb22dd0005a9ffd1c223da97p@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_43170746cb22dd0005a9ffd1c223da97p@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_43170746cb22dd0005a9ffd1c223da97p@chr3:81012915..81012923, +
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_43170746cb22dd0005a9ffd1c223da97p@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_43170746cb22dd0005a9ffd1c223da97p9@Ankrd24
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_43170746cb22dd0005a9ffd1c223da97p@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_43170746cb22dd0005a9ffd1c223da97p@chr15:12848147..12848162, +
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_43170746cb22dd0005a9ffd1c223da97p@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_43170746cb22dd0005a9ffd1c223da97p@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_43170746cb22dd0005a9ffd1c223da97p2@Strc
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_43170746cb22dd0005a9ffd1c223da97p@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_43170746cb22dd0005a9ffd1c223da97p@chr1:16651649..16651655, +
1.87e-86FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_43170746cb22dd0005a9ffd1c223da97p@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_43170746cb22dd0005a9ffd1c223da97p7@Pkn3
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_43170746cb22dd0005a9ffd1c223da97p@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_43170746cb22dd0005a9ffd1c223da97p3@Otogl
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_43170746cb22dd0005a9ffd1c223da97p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_43170746cb22dd0005a9ffd1c223da97p@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_43170746cb22dd0005a9ffd1c223da97p@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_43170746cb22dd0005a9ffd1c223da97p1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_43170746cb22dd0005a9ffd1c223da97p@chr14:102297728..102297742, +
1.87e-86FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_43170746cb22dd0005a9ffd1c223da97p@chr11:8405038..8405048, -
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_43170746cb22dd0005a9ffd1c223da97p3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_43170746cb22dd0005a9ffd1c223da97p4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_43170746cb22dd0005a9ffd1c223da97p@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_43170746cb22dd0005a9ffd1c223da97p1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_43170746cb22dd0005a9ffd1c223da97p9@Otof
1.87e-86FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_43170746cb22dd0005a9ffd1c223da97p@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_43170746cb22dd0005a9ffd1c223da97p1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_43170746cb22dd0005a9ffd1c223da97p3@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_43170746cb22dd0005a9ffd1c223da97p2@Strc
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_43170746cb22dd0005a9ffd1c223da97p11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_43170746cb22dd0005a9ffd1c223da97p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_43170746cb22dd0005a9ffd1c223da97p2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_43170746cb22dd0005a9ffd1c223da97p11@Tecta
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_43170746cb22dd0005a9ffd1c223da97p@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_43170746cb22dd0005a9ffd1c223da97p1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_43170746cb22dd0005a9ffd1c223da97p@chr3:31585340..31585360, +
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_43170746cb22dd0005a9ffd1c223da97p6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_43170746cb22dd0005a9ffd1c223da97p@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_43170746cb22dd0005a9ffd1c223da97p@chr11:94371127..94371139, -
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_43170746cb22dd0005a9ffd1c223da97p@chr9:66860888..66860899, +
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_43170746cb22dd0005a9ffd1c223da97p@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_43170746cb22dd0005a9ffd1c223da97p11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_43170746cb22dd0005a9ffd1c223da97p5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_43170746cb22dd0005a9ffd1c223da97p@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_43170746cb22dd0005a9ffd1c223da97p@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_43170746cb22dd0005a9ffd1c223da97p@chr15:65641741..65641748, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_43170746cb22dd0005a9ffd1c223da97p@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_43170746cb22dd0005a9ffd1c223da97p@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_43170746cb22dd0005a9ffd1c223da97p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_43170746cb22dd0005a9ffd1c223da97p@chr1:172843847..172843880, -
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_43170746cb22dd0005a9ffd1c223da97p3@Gipc3