Personal tools

MacroAPE 1083:9-RTKACAA

From FANTOM5_SSTAR

Revision as of 14:38, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: 9-RTKACAA,CNhs13472,BestGuess:NF2L1_f1_HM09(0.747270056750428),T:2114.0(48.54%),B:17431.8(38.80%),P:1e-38

Motif matrix
POACGT
1921.70499.3581090.8242.114
22.1142.1142.1142107.658
32.114399.546856.17856.17
41522.082.114587.6922.114
52.1141689.0862.114420.686
6980.8962.114657.454473.536
71530.53640.16654.964488.334

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

ABF1#MA0265.190.003388091.6127317GTGACAATCGTATAAAGTGATAA+
Pax2#MA0067.120.005069592.4131216GTGACAAGCGTGACT-
slbo#MA0244.100.006359413.0270817GTGACAAATTGCAAA+
NFE2L2#MA0150.100.01097565.2243917GTGACAAATGACTCAGCA+
NFIL3#MA0025.120.01268446.0377817GTGACAAATGTTACATAA-
CEBPA#MA0102.200.01928169.1780317GTGACAAATTGCGAAA-