Personal tools

MacroAPE 1083:Motif61

From FANTOM5_SSTAR

Revision as of 15:04, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: motif61

Motif matrix
POACGT
0167161565863780
0200028752
0300028752
04015263013489
0500028752
0602875200
0702875200
0802875200

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

NFATC2#MA0152.1-10.001165530.55479217CTTCTCCCTTTTCCA+
EDS1#MA0294.100.005313182.5290718CTTCTCCCATTTTTCCG-
dl_1#MA0022.140.005866062.7922418CTTCTCCCGGGGTTTTTCCC+
STAT1#MA0137.200.006061682.8853618CTTCTCCCCATTTCCCGGAAACC+
YPR196W#MA0437.100.009435274.4911918CTTCTCCCATTTCTCCG+
USV1#MA0413.100.009586234.5630518CTTCTCCCAAATTCCCCCTGAATTTGTG+
YDR026C#MA0421.1-10.01040534.9529217CTTCTCCCTTTACCCGGC+
Su(H)#MA0085.140.01059175.0416318CTTCTCCCATCTCGGTTCCCACAA-
PPARG::RXRA#MA0065.240.01240115.9029218CTTCTCCCTGACCTTTGCCCTAC-
RGT1#MA0367.110.01521917.2443118CTTCTCCCAATTTTTCCGG+
znf143#MA0088.100.01578837.5152218CTTCTCCCGATTTCCCATAATGCCTTGC+
MZF1_5-13#MA0057.1-10.01861548.8609417CTTCTCCCTTCCCCCTAC-
YNR063W#MA0432.1-10.01957549.3178817CTTCTCCCATCTCCGA-