Personal tools

UBERON:0000165

From FANTOM5_SSTAR

Revision as of 10:52, 12 September 2014 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:mouth
Definition:"First portion of the digestive tract[WP]. The portion of the digestive that develops from the stomodeum" [Wikipedia:Mouth]
Xrefs:
links:

AAO:0010355
BTO:0001090
EFO:0000825
FBbt:00003126
FMA:49184
GAID:75
galen:Mouth
[1]
[2]
MA:0002474
MAT:0000038
MESH:A.01.456.505.631
MIAA:0000038
OpenCyc:Mx4rvVidh5wpEbGdrcN5Y29ycA
TADS:0000040
TAO:0000547
TGMA:0000131
VHOG:0000812
XAO:0003029

ZFA:0000547
Synonyms: "adult mouth" EXACT []
"cavitas oris" RELATED [BTO:0001090]
"cavum oris" RELATED [BTO:0001090]
"mouth cavity" RELATED [BTO:0001090]
"oral vestibule" RELATED [BTO:0001090]
"os, cavital oralis" RELATED LATIN [Wikipedia:Mouth]
"regio oralis" EXACT [FMA:49184, FMA:TA]
"rima oris" RELATED [BTO:0001090]
"stoma" RELATED []
"vestibule of mouth" RELATED [BTO:0001090]
"vestibulum oris" RELATED [BTO:0001090]
Comments:TODO - check fly mouthpart. note in uberon we distinguish between the mouth and the oral opening. the mouth is part of the digestive tract. TODO - check isa parent subdivision of head - is it a subdivision of the head or digestive tract
Subset: major_organ
uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004906(ectodermal part of digestive tract)
develops_from:UBERON:0000930(stomodeum)
part_of:UBERON:0000033(head)



Children

part of:UBERON:0000166 (oral opening),UBERON:0000167 (oral cavity),UBERON:0001723 (tongue),UBERON:0003729 (mouth mucosa),UBERON:0010047 (oral gland),UBERON:0010056 (future tongue),UBERON:0011595 (jaw region)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000165 (mouth), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr12:57793900..57793908,-#_0dd8fdab0a69022d45c6f6588bc56faap@chr12:57793900..57793908, -
1.87e-86FFCP PHASE1:Mm9::chr15:91668686..91668696,+#_0dd8fdab0a69022d45c6f6588bc56faap2@Smgc
1.87e-86FFCP PHASE2:Mm9::chr15:91729805..91729815,+#_0dd8fdab0a69022d45c6f6588bc56faap@chr15:91729805..91729815, +
1.87e-86FFCP PHASE2:Mm9::chr12:57793900..57793908,-#_0dd8fdab0a69022d45c6f6588bc56faap@chr12:57793900..57793908, -
1.87e-86FFCP PHASE1:Mm9::chr15:91729805..91729815,+#_0dd8fdab0a69022d45c6f6588bc56faap@chr15:91729805..91729815, +
1.87e-86FFCP PHASE2:Mm9::chr15:91668686..91668696,+#_0dd8fdab0a69022d45c6f6588bc56faap2@Smgc
2.11e-67FFCP PHASE2:Hg19::chr1:75599672..75599682,-#_80b66d9b90a70e2587ed48842c1fc718p@chr1:75599672..75599682, -
2.11e-67FFCP PHASE1:Hg19::chr1:75599672..75599682,-#_80b66d9b90a70e2587ed48842c1fc718p@chr1:75599672..75599682, -
2.86e-62FFCP PHASE2:Hg19::chr1:75598362..75598407,-#_4c1a9c3b1afb92a307db23216c23894ep1@ENST00000427892, p1@uc001dgp.1
2.86e-62FFCP PHASE1:Hg19::chr1:75598362..75598407,-#_4c1a9c3b1afb92a307db23216c23894ep1@ENST00000427892, p1@uc001dgp.1
7.26e-62FFCP PHASE1:Hg19::chr14:37126765..37126799,+#_b922ef059448ef381eea81dd250ab289p2@PAX9
7.26e-62FFCP PHASE2:Hg19::chr14:37126765..37126799,+#_b922ef059448ef381eea81dd250ab289p2@PAX9
1.17e-59FFCP PHASE2:Hg19::chr1:75599683..75599699,-#_ca56e14ab8a31406db12314adbf85377p@chr1:75599683..75599699, -
1.17e-59FFCP PHASE1:Hg19::chr1:75599683..75599699,-#_ca56e14ab8a31406db12314adbf85377p@chr1:75599683..75599699, -
1.68e-58FFCP PHASE2:Mm9::chr1:52741574..52741579,+#_b2e5d771e0b6e0a98c0e8ecc050ff0bcp@chr1:52741574..52741579, +
1.68e-58FFCP PHASE1:Mm9::chr7:51271323..51271366,+#_b2e5d771e0b6e0a98c0e8ecc050ff0bcp@chr7:51271323..51271366, +
1.68e-58FFCP PHASE2:Mm9::chr10:28755265..28755269,-#_b2e5d771e0b6e0a98c0e8ecc050ff0bcp@chr10:28755265..28755269, -
1.68e-58FFCP PHASE2:Mm9::chr7:51271323..51271366,+#_b2e5d771e0b6e0a98c0e8ecc050ff0bcp@chr7:51271323..51271366, +
1.68e-58FFCP PHASE1:Mm9::chr1:52741574..52741579,+#_b2e5d771e0b6e0a98c0e8ecc050ff0bcp@chr1:52741574..52741579, +
1.68e-58FFCP PHASE2:Mm9::chr6:60435965..60435986,+#_b2e5d771e0b6e0a98c0e8ecc050ff0bcp@chr6:60435965..60435986, +
1.68e-58FFCP PHASE1:Mm9::chr6:60435965..60435986,+#_b2e5d771e0b6e0a98c0e8ecc050ff0bcp@chr6:60435965..60435986, +
1.68e-58FFCP PHASE1:Mm9::chr10:28755265..28755269,-#_b2e5d771e0b6e0a98c0e8ecc050ff0bcp@chr10:28755265..28755269, -
3.28e-58FFCP PHASE2:Mm9::chr2:153837176..153837187,+#_8bee0c0d830542a1f85aa9f12d25b99dp@chr2:153837176..153837187, +
3.28e-58FFCP PHASE2:Mm9::chr6:132314147..132314153,-#_8bee0c0d830542a1f85aa9f12d25b99dp1@Gm4736, p1@Gm8882
3.28e-58FFCP PHASE1:Mm9::chr2:153840649..153840658,+#_8bee0c0d830542a1f85aa9f12d25b99dp8@Bpifa2e
3.28e-58FFCP PHASE1:Mm9::chr2:153837176..153837187,+#_8bee0c0d830542a1f85aa9f12d25b99dp@chr2:153837176..153837187, +
3.28e-58FFCP PHASE2:Mm9::chr10:28693770..28693774,-#_8bee0c0d830542a1f85aa9f12d25b99dp5@2310057J18Rik
3.28e-58FFCP PHASE2:Mm9::chr2:153839410..153839423,+#_8bee0c0d830542a1f85aa9f12d25b99dp6@Bpifa2e
3.28e-58FFCP PHASE1:Mm9::chr10:28693770..28693774,-#_8bee0c0d830542a1f85aa9f12d25b99dp5@2310057J18Rik
3.28e-58FFCP PHASE1:Mm9::chr6:132314147..132314153,-#_8bee0c0d830542a1f85aa9f12d25b99dp1@Gm4736, p1@Gm8882
3.28e-58FFCP PHASE1:Mm9::chr2:153839410..153839423,+#_8bee0c0d830542a1f85aa9f12d25b99dp6@Bpifa2e
3.28e-58FFCP PHASE2:Mm9::chr2:153840649..153840658,+#_8bee0c0d830542a1f85aa9f12d25b99dp8@Bpifa2e
3.3e-50FFCP PHASE2:Hg19::chr1:75600067..75600094,+#_c2a068ebb43ab58bde77855be4cd2e55p2@LHX8
3.3e-50FFCP PHASE1:Hg19::chr1:75600067..75600094,+#_c2a068ebb43ab58bde77855be4cd2e55p2@LHX8
1.66e-44FFCP PHASE1:Mm9::chr15:91736964..91737001,+#_41d3b82e0b80d56d888cc9450fd6bb04p@chr15:91736964..91737001, +
1.66e-44FFCP PHASE2:Mm9::chr10:28706137..28706150,-#_41d3b82e0b80d56d888cc9450fd6bb04p3@2310057J18Rik
1.66e-44FFCP PHASE1:Mm9::chr10:28706137..28706150,-#_41d3b82e0b80d56d888cc9450fd6bb04p3@2310057J18Rik
1.66e-44FFCP PHASE2:Mm9::chr15:91736964..91737001,+#_41d3b82e0b80d56d888cc9450fd6bb04p@chr15:91736964..91737001, +
2.07e-44FFCP PHASE2:Hg19::chr14:37126870..37126882,+#_e1586ed3b90b8cf88b9280e35c0e5a12p1@ENST00000555639
2.07e-44FFCP PHASE1:Hg19::chr14:37126870..37126882,+#_e1586ed3b90b8cf88b9280e35c0e5a12p1@ENST00000555639
2.75e-44FFCP PHASE1:Mm9::chr2:153835527..153835537,+#_90dc0aad7fc31b2ad46c5eef14e92f2bp@chr2:153835527..153835537, +
2.75e-44FFCP PHASE2:Mm9::chr2:153833963..153833980,+#_90dc0aad7fc31b2ad46c5eef14e92f2bp5@Bpifa2e
2.75e-44FFCP PHASE1:Mm9::chr2:153833963..153833980,+#_90dc0aad7fc31b2ad46c5eef14e92f2bp5@Bpifa2e
2.75e-44FFCP PHASE2:Mm9::chr2:153835527..153835537,+#_90dc0aad7fc31b2ad46c5eef14e92f2bp@chr2:153835527..153835537, +
4.52e-44FFCP PHASE1:Mm9::chr7:51205984..51206017,+#_6aea705790a53b011487476086a211ffp1@Klk1b8
4.52e-44FFCP PHASE1:Mm9::chr18:70404072..70404082,-#_6aea705790a53b011487476086a211ffp3@2310002L13Rik
4.52e-44FFCP PHASE2:Mm9::chr7:51271652..51271675,+#_6aea705790a53b011487476086a211ffp@chr7:51271652..51271675, +
4.52e-44FFCP PHASE1:Mm9::chr7:51352815..51352824,+#_6aea705790a53b011487476086a211ffp@chr7:51352815..51352824, +
4.52e-44FFCP PHASE2:Mm9::chr19:34045260..34045268,+#_6aea705790a53b011487476086a211ffp@chr19:34045260..34045268, +
4.52e-44FFCP PHASE1:Mm9::chr17:40359284..40359293,-#_6aea705790a53b011487476086a211ffp@chr17:40359284..40359293, -
4.52e-44FFCP PHASE2:Mm9::chr17:42509769..42509771,-#_6aea705790a53b011487476086a211ffp@chr17:42509769..42509771, -
4.52e-44FFCP PHASE1:Mm9::chr15:91729848..91729853,+#_6aea705790a53b011487476086a211ffp@chr15:91729848..91729853, +
4.52e-44FFCP PHASE2:Mm9::chr5:118350392..118350394,-#_6aea705790a53b011487476086a211ffp@chr5:118350392..118350394, -
4.52e-44FFCP PHASE1:Mm9::chr13:64788940..64788944,+#_6aea705790a53b011487476086a211ffp@chr13:64788940..64788944, +
4.52e-44FFCP PHASE2:Mm9::chr7:51254558..51254599,-#_6aea705790a53b011487476086a211ffp@chr7:51254558..51254599, -
4.52e-44FFCP PHASE1:Mm9::chr3:129381353..129381363,-#_6aea705790a53b011487476086a211ffp@chr3:129381353..129381363, -
4.52e-44FFCP PHASE1:Mm9::chr19:34045246..34045251,+#_6aea705790a53b011487476086a211ffp@chr19:34045246..34045251, +
4.52e-44FFCP PHASE2:Mm9::chr19:34035674..34035677,+#_6aea705790a53b011487476086a211ffp3@Lipf
4.52e-44FFCP PHASE2:Mm9::chr17:40369536..40369546,-#_6aea705790a53b011487476086a211ffp@chr17:40369536..40369546, -
4.52e-44FFCP PHASE2:Mm9::chr7:51234496..51234499,+#_6aea705790a53b011487476086a211ffp@chr7:51234496..51234499, +
4.52e-44FFCP PHASE1:Mm9::chr14:58497252..58497259,+#_6aea705790a53b011487476086a211ffp@chr14:58497252..58497259, +
4.52e-44FFCP PHASE2:Mm9::chr13:13005263..13005265,-#_6aea705790a53b011487476086a211ffp@chr13:13005263..13005265, -
4.52e-44FFCP PHASE1:Mm9::chr17:24090258..24090267,+#_6aea705790a53b011487476086a211ffp@chr17:24090258..24090267, +
4.52e-44FFCP PHASE1:Mm9::chr6:43548213..43548219,+#_6aea705790a53b011487476086a211ffp@chr6:43548213..43548219, +
4.52e-44FFCP PHASE2:Mm9::chr18:70404027..70404032,-#_6aea705790a53b011487476086a211ffp@chr18:70404027..70404032, -
4.52e-44FFCP PHASE2:Mm9::chr14:58497252..58497259,+#_6aea705790a53b011487476086a211ffp@chr14:58497252..58497259, +
4.52e-44FFCP PHASE1:Mm9::chr4:149561552..149561559,+#_6aea705790a53b011487476086a211ffp@chr4:149561552..149561559, +
4.52e-44FFCP PHASE1:Mm9::chr16:22918343..22918350,+#_6aea705790a53b011487476086a211ffp13@Fetub
4.52e-44FFCP PHASE2:Mm9::chr7:51209296..51209342,+#_6aea705790a53b011487476086a211ffp@chr7:51209296..51209342, +
4.52e-44FFCP PHASE2:Mm9::chr7:51352815..51352824,+#_6aea705790a53b011487476086a211ffp@chr7:51352815..51352824, +
4.52e-44FFCP PHASE1:Mm9::chr7:51377618..51377628,+#_6aea705790a53b011487476086a211ffp@chr7:51377618..51377628, +
4.52e-44FFCP PHASE2:Mm9::chr8:95903671..95903681,-#_6aea705790a53b011487476086a211ffp3@Ces1h
4.52e-44FFCP PHASE2:Mm9::chr1:36297930..36297934,-#_6aea705790a53b011487476086a211ffp@chr1:36297930..36297934, -
4.52e-44FFCP PHASE1:Mm9::chr11:18956132..18956137,-#_6aea705790a53b011487476086a211ffp@chr11:18956132..18956137, -
4.52e-44FFCP PHASE1:Mm9::chr1:36155397..36155406,-#_6aea705790a53b011487476086a211ffp@chr1:36155397..36155406, -
4.52e-44FFCP PHASE1:Mm9::chr19:34051208..34051222,+#_6aea705790a53b011487476086a211ffp@chr19:34051208..34051222, +
4.52e-44FFCP PHASE2:Mm9::chr19:34041399..34041412,-#_6aea705790a53b011487476086a211ffp@chr19:34041399..34041412, -
4.52e-44FFCP PHASE2:Mm9::chr5:75379604..75379605,-#_6aea705790a53b011487476086a211ffp@chr5:75379604..75379605, -
4.52e-44FFCP PHASE1:Mm9::chr2:153834839..153834847,+#_6aea705790a53b011487476086a211ffp@chr2:153834839..153834847, +
4.52e-44FFCP PHASE2:Mm9::chr2:129864186..129864212,+#_6aea705790a53b011487476086a211ffp@chr2:129864186..129864212, +
4.52e-44FFCP PHASE2:Mm9::chr6:127527955..127527956,+#_6aea705790a53b011487476086a211ffp6@Efcab4b
4.52e-44FFCP PHASE1:Mm9::chr7:51254558..51254599,-#_6aea705790a53b011487476086a211ffp@chr7:51254558..51254599, -
4.52e-44FFCP PHASE1:Mm9::chr19:34039030..34039042,+#_6aea705790a53b011487476086a211ffp@chr19:34039030..34039042, +
4.52e-44FFCP PHASE2:Mm9::chr17:40359258..40359285,+#_6aea705790a53b011487476086a211ffp@chr17:40359258..40359285, +
4.52e-44FFCP PHASE1:Mm9::chr1:16804330..16804337,+#_6aea705790a53b011487476086a211ffp@chr1:16804330..16804337, +
4.52e-44FFCP PHASE2:Mm9::chr2:43039427..43039429,+#_6aea705790a53b011487476086a211ffp@chr2:43039427..43039429, +
4.52e-44FFCP PHASE1:Mm9::chr7:51234496..51234499,+#_6aea705790a53b011487476086a211ffp@chr7:51234496..51234499, +
4.52e-44FFCP PHASE2:Mm9::chr2:120942190..120942201,-#_6aea705790a53b011487476086a211ffp@chr2:120942190..120942201, -
4.52e-44FFCP PHASE2:Mm9::chr7:51371627..51371665,-#_6aea705790a53b011487476086a211ffp@chr7:51371627..51371665, -
4.52e-44FFCP PHASE1:Mm9::chr15:103104236..103104239,+#_6aea705790a53b011487476086a211ffp@chr15:103104236..103104239, +
4.52e-44FFCP PHASE2:Mm9::chr4:149571419..149571431,+#_6aea705790a53b011487476086a211ffp@chr4:149571419..149571431, +
4.52e-44FFCP PHASE1:Mm9::chr2:129864186..129864212,+#_6aea705790a53b011487476086a211ffp@chr2:129864186..129864212, +
4.52e-44FFCP PHASE2:Mm9::chr15:91728524..91728531,+#_6aea705790a53b011487476086a211ffp@chr15:91728524..91728531, +
4.52e-44FFCP PHASE2:Mm9::chr13:112978961..112978966,+#_6aea705790a53b011487476086a211ffp@chr13:112978961..112978966, +
4.52e-44FFCP PHASE1:Mm9::chr7:51209296..51209342,+#_6aea705790a53b011487476086a211ffp@chr7:51209296..51209342, +
4.52e-44FFCP PHASE1:Mm9::chr9:43677486..43677488,+#_6aea705790a53b011487476086a211ffp@chr9:43677486..43677488, +
4.52e-44FFCP PHASE1:Mm9::chr7:51360938..51360948,+#_6aea705790a53b011487476086a211ffp@chr7:51360938..51360948, +
4.52e-44FFCP PHASE1:Mm9::chr17:40360870..40360872,-#_6aea705790a53b011487476086a211ffp@chr17:40360870..40360872, -
4.52e-44FFCP PHASE2:Mm9::chr7:51268024..51268029,+#_6aea705790a53b011487476086a211ffp2@Egfbp2, p2@Klk1b26
4.52e-44FFCP PHASE1:Mm9::chr6:131787182..131787209,+#_6aea705790a53b011487476086a211ffp@chr6:131787182..131787209, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "Cavity in which food is initially ingested and generally contains teeth, tongue and glands.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0000165&oldid=3273762"