NonredundantMotifs:156

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known156
• db :HOCOMOCO
• Id :EPAS1_si
• name  :
• score :0.664673842150266
  
• External refs:

EntrezGene:2034
UniProt:2034

• Internal refs:

EntrezGene:2034

Motif matrix

P0 A C G T 1 0.0 1.1179636129823016 9.31688732884248 1.565149058175228 2 1.565149058175228 0.0 2.571316309859292 7.86353463196548 3 2.124130864666368 0.0 9.875869135333632 0.0 4 3.6273454623392283 3.7391418236374676 1.453352696876988 3.1801600171463162 5 4.298123630128608 0.0 7.70187636987138 0.0 6 0.0 2.01233450336814 1.1179636129823016 8.869701883649554 7 6.919301840783771 0.0 5.080698159216228 0.0 8 0.0 7.81367273116962 3.6273454623392283 0.5589818064911508 9 0.0 0.0 12.0 0.0 10 1.565149058175228 0.0 0.0 10.434850941824772 11 0.0 2.4595199485610637 8.422516438456633 1.1179636129823016 12 0.5589818064911508 1.7887417807716839 6.024930950397936 3.6273454623392283 13 0.0 1.453352696876988 10.546647303123013 0.0