NonredundantMotifs:188

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known188
• db :HOCOMOCO
• Id :HXD13_f1
• name  :
• score :0.027035027744725406
  
• External refs:

EntrezGene:3239
UniProt:3239

• Internal refs:

EntrezGene:3239

Motif matrix

P0 A C G T 1 2.656521739130441 1.526086956521738 1.526086956521738 7.291304347826083 2 0.0 0.0 1.0173913043478262 11.982608695652166 3 1.0173913043478262 0.0 2.260869565217393 9.721739130434786 4 10.202173913043476 0.2543478260869559 0.2543478260869559 2.289130434782607 5 0.9326086956521737 2.967391304347821 0.2543478260869559 8.845652173913049 6 1.271739130434782 0.2543478260869559 2.967391304347821 8.506521739130427 7 8.393478260869559 1.271739130434782 2.402173913043476 0.9326086956521737 8 0.2543478260869559 0.9326086956521737 8.28043478260869 3.5326086956521787 9 5.765217391304345 0.0 6.217391304347821 1.0173913043478262 10 0.0 0.0 11.304347826086952 1.6956521739130481 11 8.647826086956524 2.204347826086952 0.5086956521739131 1.6391304347826072