NonredundantMotifs:36

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known36
• db :HOCOMOCO
• Id :RARA_f1
• name  :
• score :0.2788936316060929
  
• External refs:

EntrezGene:5914
UniProt:5914

• Internal refs:

EntrezGene:5914

Motif matrix
P0 A C G T 1 11.09350127307007 19.55671508738457 22.621106778155603 4.716253700384445 2 57.9875768389947 0.0 0.0 0.0 3 0.0 0.0 57.9875768389947 0.0 4 0.0 0.0 57.9875768389947 0.0 5 0.0 0.0 0.0 57.9875768389947 6 0.0 57.9875768389947 0.0 0.0 7 57.9875768389947 0.0 0.0 0.0